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All Funded Projects

Filter Total Items: 156

National Public Screening Tool for Invasive and Non-native Aquatic Species Data

Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these nonindigenous occurren
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National Public Screening Tool for Invasive and Non-native Aquatic Species Data

Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these nonindigenous occurren
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Integrating short-term climate forecast into a restoration management support tool

Natural resources managers are regularly required to make decisions regarding upcoming restoration treatments, often based on little more than business as usual practices. To assist in the decision-making process, we created a tool that predicts site-specific soil moisture and climate for the upcoming year, and provides guidance on whether common restoration activities (i.e. seeding, planting) wil
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Integrating short-term climate forecast into a restoration management support tool

Natural resources managers are regularly required to make decisions regarding upcoming restoration treatments, often based on little more than business as usual practices. To assist in the decision-making process, we created a tool that predicts site-specific soil moisture and climate for the upcoming year, and provides guidance on whether common restoration activities (i.e. seeding, planting) wil
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Transforming Biosurveillance by Standardizing and Serving 40 Years of Wildlife Disease Data

Over the past 40 years the National Wildlife Health center has collected wildlife health information from around the U.S. and beyond, amassing the world’s largest repository of wildlife-disease surveillance data. This project identified, characterized, and documented NWHC’s locally stored wildlife health datasets, a critical first step to migrating them to new laboratory- and public-facing data s
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Transforming Biosurveillance by Standardizing and Serving 40 Years of Wildlife Disease Data

Over the past 40 years the National Wildlife Health center has collected wildlife health information from around the U.S. and beyond, amassing the world’s largest repository of wildlife-disease surveillance data. This project identified, characterized, and documented NWHC’s locally stored wildlife health datasets, a critical first step to migrating them to new laboratory- and public-facing data s
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Extending ScienceBase for Disaster Risk Reduction

Access to up-to-date geospatial data is critical when responding to natural hazards-related crises, such as volcanic eruptions. To address the need to reliably provide access to near real-time USGS datasets, we developed a process to allow data managers within the USGS Volcano Hazard Program to programmatically publish geospatial webservices to a cloud-based instance of GeoServer hosted on Amazon
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Extending ScienceBase for Disaster Risk Reduction

Access to up-to-date geospatial data is critical when responding to natural hazards-related crises, such as volcanic eruptions. To address the need to reliably provide access to near real-time USGS datasets, we developed a process to allow data managers within the USGS Volcano Hazard Program to programmatically publish geospatial webservices to a cloud-based instance of GeoServer hosted on Amazon
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Open-Source and Open-Workflow Climate Futures Toolbox for Adaptation Planning

Global climate models are a key source of climate information and produce large amounts of spatially explicit data for various physical parameters. However, these projections have substantial uncertainties associated with them, and the datasets themselves can be difficult to work with. The project team created the first version (cst 0.1.0) of the Climate Futures Toolbox, an open source workflow in
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Open-Source and Open-Workflow Climate Futures Toolbox for Adaptation Planning

Global climate models are a key source of climate information and produce large amounts of spatially explicit data for various physical parameters. However, these projections have substantial uncertainties associated with them, and the datasets themselves can be difficult to work with. The project team created the first version (cst 0.1.0) of the Climate Futures Toolbox, an open source workflow in
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CDI Risk Map

The Community for Data Integration (CDI) Risk Map Project is developing modular tools and services to benefit a wide group of scientists and managers that deal with various aspects of risk research and planning. Risk is the potential that exposure to a hazard will lead to a negative consequence to an asset such as human or natural resources. This project builds upon a Department of the Interior pr
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CDI Risk Map

The Community for Data Integration (CDI) Risk Map Project is developing modular tools and services to benefit a wide group of scientists and managers that deal with various aspects of risk research and planning. Risk is the potential that exposure to a hazard will lead to a negative consequence to an asset such as human or natural resources. This project builds upon a Department of the Interior pr
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Investigation of Lidar Data Processing and Analysis in the Cloud

Lower technical and financial barriers have led to a proliferation of lidar point-cloud datasets acquired to support diverse USGS projects. The objective of this effort was to implement an open-source, cloud-based solution through USGS Cloud Hosting Solutions (CHS) that would address the needs of the growing USGS lidar community. We proposed to allow users to upload point-cloud datasets to CHS-ad
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Investigation of Lidar Data Processing and Analysis in the Cloud

Lower technical and financial barriers have led to a proliferation of lidar point-cloud datasets acquired to support diverse USGS projects. The objective of this effort was to implement an open-source, cloud-based solution through USGS Cloud Hosting Solutions (CHS) that would address the needs of the growing USGS lidar community. We proposed to allow users to upload point-cloud datasets to CHS-ad
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ICE! Ice Jam Hazard Mobile-Friendly Website

Ice jams are a major hazard. The project team worked with the US Army Corps of Engineers, National Weather Service, Silver Jackets, and USGS stakeholders to develop a mobile-friendly prototype of an Ice Jam Hazard website and reporting system. The prototype shows how ice jam conditions can be recorded nationwide. The public can view and download ice jam information. Historic ice jam locations and
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ICE! Ice Jam Hazard Mobile-Friendly Website

Ice jams are a major hazard. The project team worked with the US Army Corps of Engineers, National Weather Service, Silver Jackets, and USGS stakeholders to develop a mobile-friendly prototype of an Ice Jam Hazard website and reporting system. The prototype shows how ice jam conditions can be recorded nationwide. The public can view and download ice jam information. Historic ice jam locations and
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Mapping Land-Use, Hazard Vulnerability and Habitat Suitability Using Deep Neural Networks

Deep learning is a computer analysis technique inspired by the human brain’s ability to learn. It involves several layers of artificial neural networks to learn and subsequently recognize patterns in data, forming the basis of many state-of-the-art applications from self-driving cars to drug discovery and cancer detection. Deep neural networks are capable of learning many levels of abstraction, an
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Mapping Land-Use, Hazard Vulnerability and Habitat Suitability Using Deep Neural Networks

Deep learning is a computer analysis technique inspired by the human brain’s ability to learn. It involves several layers of artificial neural networks to learn and subsequently recognize patterns in data, forming the basis of many state-of-the-art applications from self-driving cars to drug discovery and cancer detection. Deep neural networks are capable of learning many levels of abstraction, an
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Workflows to Support Integrated Predictive Science Capacity: Forecasting Invasive Species for Natural Resource Planning and Risk Assessment

Insect pests cost billions of dollars per year globally, negatively impacting food crops and infrastructure and contributing to the spread of disease. Timely information regarding developmental stages of pests can facilitate early detection and control, increasing efficiency and effectiveness. To address this need, the USA National Phenology Network (USA-NPN) created a suite of “Pheno Forecast” ma
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Workflows to Support Integrated Predictive Science Capacity: Forecasting Invasive Species for Natural Resource Planning and Risk Assessment

Insect pests cost billions of dollars per year globally, negatively impacting food crops and infrastructure and contributing to the spread of disease. Timely information regarding developmental stages of pests can facilitate early detection and control, increasing efficiency and effectiveness. To address this need, the USA National Phenology Network (USA-NPN) created a suite of “Pheno Forecast” ma
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Content Specifications to Enable USGS Transition to ISO Metadata Standard

USGS will soon transition to the international metadata standards known collectively as ISO 19115. The open-ended nature of ISO benefits with much greater flexibility and vocabulary to describe research products. However, that flexibility means few constraints that can guide authors and ensure standardized, robust documentation across the bureau. This project proposed that the USGS data community
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Content Specifications to Enable USGS Transition to ISO Metadata Standard

USGS will soon transition to the international metadata standards known collectively as ISO 19115. The open-ended nature of ISO benefits with much greater flexibility and vocabulary to describe research products. However, that flexibility means few constraints that can guide authors and ensure standardized, robust documentation across the bureau. This project proposed that the USGS data community
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Knowledge Extraction Algorithms (KEA): Turning Literature Into Data

Identifying, extracting, and mobilizing information from current and historical literature is a time-consuming part of organizing and collating synthetic data productions. This project explored the use of algorithm-based methods to identify and extract occurrence information from the GeoDeepDive (GDD) literature database to support upkeep of the Nonindigenous Aquatic Species (NAS) data. The GeoDee
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Knowledge Extraction Algorithms (KEA): Turning Literature Into Data

Identifying, extracting, and mobilizing information from current and historical literature is a time-consuming part of organizing and collating synthetic data productions. This project explored the use of algorithm-based methods to identify and extract occurrence information from the GeoDeepDive (GDD) literature database to support upkeep of the Nonindigenous Aquatic Species (NAS) data. The GeoDee
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