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Publications

Explore scientific publications from the USGS St. Petersburg Coastal and Marine Science Center.

Filter Total Items: 912

Prediction and assimilation of surf-zone processes using a Bayesian network: Part II: Inverse models

A Bayesian network model has been developed to simulate a relatively simple problem of wave propagation in the surf zone (detailed in Part I). Here, we demonstrate that this Bayesian model can provide both inverse modeling and data-assimilation solutions for predicting offshore wave heights and depth estimates given limited wave-height and depth information from an onshore location. The inverse me
Authors
Nathaniel G. Plant, K. Todd Holland

Characterization of sediments from the Gulf of Mexico and Atlantic shorelines, Texas to Florida

In response to the Deepwater Horizon oil spill, sediment samples that were projected to have a high probability of being impacted by the oil were collected from shoreline zones of Texas, Louisiana, Mississippi, Alabama, and Florida. Sixty-one sites were sampled and analyzed for hydraulic conductivity, porosity, and grain-size distribution. The objective of this effort was to provide a set of basel
Authors
John T. Lisle, Norris N. Comer

A survey of microbial community diversity in marine sediments impacted by petroleum hydrocarbons from the Gulf of Mexico and Atlantic shorelines, Texas to Florida

Microbial community genomic DNA was extracted from sediment samples collected along the Gulf of Mexico and Atlantic coasts from Texas to Florida. Sample sites were identified as being ecologically sensitive and (or) as having high potential of being impacted by Macondo-1 (M-1) well oil from the Deepwater Horizon blowout. The diversity within the microbial communities associated with the collected
Authors
John T. Lisle, Sarah H. Stellick

A survey of alterations in microbial community diversity in marine sediments in response to oil from the Deepwater Horizon spill: Northern Gulf of Mexico shoreline, Texas to Florida

Microbial community genomic DNA was extracted from sediment samples collected from the northern Gulf of Mexico (NGOM) coast. These samples had a high probability of being impacted by Macondo-1 (M-1) well oil from the Deepwater Horizon (DWH) drilling site. The hypothesis for this project was that presence of M-1 oil in coastal sediments would significantly alter the diversity within the microbial c
Authors
John T. Lisle

The use of epifluorescent microscopy and quantitative polymerase chain reaction to determine the presence/absence and identification of microorganisms associated with domestic and foreign wallboard samples

Epifluorescent microscopy and quantitative polymerase chain reaction (qPCR) were utilized to determine the presence, concentration and identification of bacteria, and more specifically sulfate reducing bacteria (SRB) in subsamples of Chinese and North American wallboard, and wallboard-mine rock. Bacteria were visible in most subsamples, which included wallboard-lining paper from each side of the w
Authors
Dale W. Griffin

Microhabitat associations of a semi-terrestrial fish, Kryptolebias marmoratus (Poey 1880) in a mosquito-ditched mangrove forest, west-central Florida

Mangrove rivulus (Kryptolebias marmoratus) is one of the few species of fish that is semi-terrestrial and able to use exposed intertidal and potentially supratidal habitats for prolonged periods of time. Based on previous work demonstrating frequent use of subterranean crab burrows as well as damp leaf litter and logs, we examined the microhabitat associations of rivulus in a mosquito-ditched mang
Authors
Travis M. Richards, Justin M. Krebs, Carole C. McIvor

Archive of digital Chirp subbottom profile data collected during USGS cruise 08CCT01, Mississippi Gulf Islands, July 2008

In July of 2008, the U.S. Geological Survey (USGS) conducted geophysical surveys to investigate the geologic controls on island framework from Ship Island to Horn Island, Mississippi, for the Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazard Susceptibility project. Funding was provided through the Geologic Framework and Holocene Coastal Evolution of the Mississippi-Alabama Region Subtask
Authors
Arnell S. Forde, Shawn V. Dadisman, James G. Flocks, Charles R. Worley

Characterization of culturable bacteria isolated from the cold-water coral Lophelia pertusa

Microorganisms associated with corals are hypothesized to contribute to the function of the host animal by cycling nutrients, breaking down carbon sources, fixing nitrogen, and producing antibiotics. This is the first study to culture and characterize bacteria from Lophelia pertusa, a cold-water coral found in the deep sea, in an effort to understand the roles that the microorganisms play in the c
Authors
Julia P. Galkiewicz, Zoe A. Pratte, Michael A. Gray, Christina A. Kellogg

Habitat diversity in the Northeastern Gulf of Mexico: Selected video clips from the Gulfstream Natural Gas Pipeline digital archive

This project combines underwater video with maps and descriptions to illustrate diverse seafloor habitats from Tampa Bay, Florida, to Mobile Bay, Alabama. A swath of seafloor was surveyed with underwater video to 100 meters (m) water depth in 1999 and 2000 as part of the Gulfstream Natural Gas System Survey. The U.S. Geological Survey (USGS) in St. Petersburg, Florida, in cooperation with Ecke
Authors
Ellen A. Raabe, Robert D'Anjou, Domonique K. Pope, Lisa L. Robbins

Chemically-mediated interactions between macroalgae Dictyota spp. and multiple life-history stages of the coral Porites astreoides

Competition between corals and macroalgae is often assumed to occur on reefs, especially those that have undergone shifts from coral to algal dominance; however, data examining these competitive interactions, especially during the early life-history stages of corals, are scarce. We conducted a series of field and outdoor seawater-table experiments to test the hypothesis that allelopathy (chemical
Authors
Valerie J. Paul, Ilsa B. Kuffner, Linda J. Walters, Raphael Ritson-Williams, Kevin S. Beach, Mikel A. Becerro

Archive of digital Chirp subbottom profile data collected during USGS cruises 09CCT03 and 09CCT04, Mississippi and Alabama Gulf Islands, June and July 2009

In June and July of 2009, the U.S. Geological Survey (USGS) conducted geophysical surveys to investigate the geologic controls on island framework from Cat Island, Mississippi, to Dauphin Island, Alabama, as part of a broader USGS study on Coastal Change and Transport (CCT). The surveys were funded through the Northern Gulf of Mexico Ecosystem Change and Hazard Susceptibility Project as part of th
Authors
Arnell S. Forde, Shawn V. Dadisman, James G. Flocks, Dana S. Wiese

USGS St. Petersburg Coastal and Marine Science Center--Research activities in the U.S. Virgin Islands

The U.S. Geological Survey (USGS) St. Petersburg Coastal and Marine Science Center in Florida investigates earth-science processes related to coastal and marine environments as well as to societal implications of natural hazards, resource sustainability, and environmental change. The Center is conducting ongoing research in and around the U.S. Virgin Islands that is providing baseline information
Authors
Matthew Cimitile