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Publications

Browse more than 150,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Upper Midwest Environmental Sciences Center Publications

Filter Total Items: 3202

Biofouling of a unionid mussel by dreissenid mussels in nearshore zones of the Great Lakes

In North America, native unionid mussels are imperiled due to factors such as habitat degradation, pollution, and invasive species. One of the most substantial threats is that posed by dreissenid mussels, which are invasive mussels that attach to hard substrates including unionid shells and can restrict movement and feeding of unionids. This dreissenid mussel biofouling of unionids varies spatiall
Authors
James H. Larson, Sean Bailey, Mary Anne Evans

Optimizing surveys of fall-staging geese using aerial imagery and automated counting

Ocular aerial surveys allow efficient coverage of large areas and can be used to monitor abundance and distribution of wild populations. However, uncertainty around resulting population estimates can be large due to difficulty in visually identifying and counting animals from aircraft, as well as logistical challenges in estimating detection probabilities. Photographic aerial surveys can mitigate
Authors
Emily L. Weiser, Paul L. Flint, Dennis K Marks, Brad S Shults, Heather M. Wilson, Sarah J Thompson, Julian B. Fischer

USGS invasive carp database management and integration support

No abstract available.
Authors
Enrika Hlavacek, Travis J. Harrison

Validation of a portable eDNA detection kit for invasive carps

Loop-mediated isothermal amplification (LAMP) is a rapid molecular detection technique that has been used as a diagnostic tool for detecting human and animal pathogens for over 20 years and is promising for detecting environmental DNA shed by invasive species. We designed a LAMP assay to detect the invasive carps, silver carp (Hypophthalmichthys molitrix), bighead carp (Hypophthalmichthys nobilis)
Authors
Stacie A. Kageyama, Matthew Regh Hoogland, Tariq Tajjioui, Theresa M. Schreier, Richard A. Erickson, Christopher M. Merkes

Gaussian process forecasts Pseudogymnoascus destructans will cover coterminous United States by 2030

White-nose syndrome has been decimating populations of several bat species since its first occurrence in the Northeastern United States in the winter 2006–2007. The spread of the disease has been monitored across the continent through the collaboration of many organizations. Inferring the rate of spread of the disease and predicting its arrival at new locations is critical when assessing the curre
Authors
Ashton M. Wiens, Wayne E. Thogmartin

Freshwater mussels show elevated viral richness and intensity during a mortality event

Freshwater mussels (Unionida) are among the world’s most imperiled taxa, but the relationship between freshwater mussel mortality events and infectious disease is largely unstudied. We surveyed viromes of a widespread and abundant species (mucket, Actinonaias ligamentina; syn: Ortmanniana ligamentina) experiencing a mortality event of unknown etiology in the Huron River, Michigan, in 2019–2020 and
Authors
Jordan Richard, Eric Leis, Christopher D. Dunn, Cleyo Harris, Rose Agbalog, Lewis J. Campbell, Susan Knowles, Diane L. Waller, Joel G. Putnam, Tony Goldberg

Vegetation map for the Seboeis Unit of Katahdin Woods and Waters National Monument

The Katahdin Woods and Waters National Monument, located in the forests of central Maine, is a newly (2016) established unit for the National Park Service. To better understand the condition of lands within the monument and inform management planning, Katahdin Woods and Waters National Monument resource managers wanted better information of the vegetation present within the monument. To meet this
Authors
Andrew C. Strassman, Kevin D. Hop, Stephanie R. Sattler, Justin Schlawin, Don Cameron

Behavioral responses of native and invasive fishes of the Upper Mississippi River to 100 hp boat motor acoustic stimulus

Acoustic deterrents are currently being considered for deployment at strategic bottlenecks, such as lock and dams of major rivers, to deter upstream movement of invasive carp. Previous studies have demonstrated that bighead and silver carp (Hypophthalmichthys nobilis and H. molitrix, respectively) display negative phonotaxis to playbacks of broadband sound recordings produced from a 100 hp outboar
Authors
Kelsie A. Murchy, Brooke J Vetter, Marybeth K. Brey, Allen F. Mensinger

USGS Telemetry Project

No abstract available.
Authors
Marybeth K. Brey, Brent C. Knights, Jessica Stanton, Sean Bailey, Travis J. Harrison, Douglas Appel, Andrea K. Fritts, James J. Duncker, P. Ryan Jackson

Automating sandhill crane counts from nocturnal thermal aerial imagery using deep learning

Population monitoring is essential to management and conservation efforts for migratory birds, but traditional low-altitude aerial surveys with human observers are plagued by individual observer bias and risk to flight crews. Aerial surveys that use remote sensing can reduce bias and risk, but manual counting of wildlife in imagery is laborious and may be cost-prohibitive. Therefore, automated met
Authors
Emilio Luz-Ricca, Kyle Lawrence Landolt, Bradley A. Pickens, Mark D. Koneff

Multi-omics responses in tree swallow (Tachycineta bicolor) nestlings from the Maumee Area of Concern, Maumee River, Ohio

A multi-omics approach was utilized to identify altered biological responses and functions, and to prioritize contaminants to assess the risks of chemical mixtures in the Maumee Area of Concern (AOC), Maumee River, OH, USA. The Maumee AOC is designated by the United States Environmental Protection Agency as having significant beneficial use impairments, including degradation of fish and wildlife p
Authors
Chi Yen Tseng, Christine M. Custer, Thomas W. Custer, Paul Dummer, Natalie K. Karouna-Renier, Cole W. Matson

Effects of shady environments on fish collective behavior

Despite significant efforts devoted to understanding the underlying complexity and emergence of collective movement in animal groups, the role of different external settings on this type of movement remains largely unexplored. Here, by combining time series analysis and complex network tools, we present an extensive investigation of the effects of shady environments on the behavior of a fish speci
Authors
Haroldo V. Ribeiro, Matthew Ross Acre, Jacob Faulkner, Leonardo R. da Cunha, Katelyn M. Lawson, James J. Wamboldt, Marybeth K. Brey, Christa M. Woodley, Robin Calfee