DISCOVRE: Diversity, Systematics and Connectivity of Vulnerable Reef Ecosystems Active
June is Oceans Month!
USGS is paving the way for exploration and scientific discovery in the largest ecosystem on our planet: the deep sea.
DEEP SEARCH: The Final Leg
USGS scientists mapped and collected data from deep-sea environments off the U.S. Southeastern coast
Deep-Sea EXPRESS
USGS scientists join multi-agency expedition to study deep-sea reefs and associated habitats off the U.S. West Coast
Deep Sea Discovery
USGS joins partners in discovery of 85-mile-long coral reef off the coast of South Carolina
DISCOVRE (DIversity, Systematics and COnnectivity of Vulnerable Reef Ecosystems) is an integrated, multidisciplinary, international effort investigating the unique and fragile deep-sea coral environments from the microscopic level to the ecosystem level.
Deep-Sea Coral Resources
Check out the links below for more information on deep-sea corals.
The Deep Sea
The deep sea refers to anything below 200 m depth in the ocean; beyond this depth, little to no sunlight reaches, temperatures drop, and pressure increases. Yet, life persists. Diverse environments, such as trenches, canyons, volcanoes, and seamounts, scattered over the seafloor are home to a diversity of fishes, crustaceans, anemones, sea stars, and corals.
Deep-sea corals are as colorful and diverse as their shallow-water counterparts, however, because of the lack of sunlight, deepwater corals obtain energy by using their tentacles to capture prey rather than through photosynthesis. Deep-sea coral reefs provide food and shelter for marine life, including commercially and recreationally important species, and play a critical role in the aquatic food web.
To better understand these little explored yet vital deep-sea coral reef ecosystems, USGS scientists from around the Nation contribute their expertise to the DISCOVRE effort. The multi-disciplinary approach examines components of microbiology, population genetics, paleoecology, food webs, taxonomy, community ecology, physical oceanography, seafloor characteristics, and submarine hazards. DISCOVRE relies on a network of partners from around the country and world, including the Bureau of Ocean Energy Management, National Oceanic and Atmospheric Administration (NOAA), and academic institutions. Using innovative tools and technologies, USGS scientists implement a multi-faceted research program that weaves together expertise in a variety of disciplines to investigate deepwater reefs.
Benthic Ecology
Benthic ecology is the term scientists use to describe the study of the animals living in or on the bottom of a water body. As part of the DISCOVRE project, the Benthic Ecology Group conducts research to understand community structure, biodiversity, trophic structure, and habitat connectivity of marine benthic ecosystems. The work involves examining the animals living in and on the seafloor in a variety of natural and artificial marine habitats:
- deep-sea and shallow-water corals,
- chemosynthetic seeps,
- shipwrecks,
- marine canyons, and
- wetland communities.
Marine Geology and Geophysics
Geology and geophysics refer to the study of physical structure and associated processes occurring on the planet. The USGS marine geology and geophysics team maps seafloor morphology and images the shallow sub-seafloor structure of the canyons, plateaus, and other components of the deep-sea landscape to better understand the processes that form and shape these features. Sampling sediment and rocks allows scientists to ground truth geophysical and visual observations, while providing valuable information about the composition and age of these underwater geologic environments.
Microbial Ecology
Microbial ecology is the study of microbes (bacteria, archaea, fungi, viruses), how they interact with each other, their host (if they are living on/in a plant or animal), and their environment.
Microbes are responsible for important ecosystem services, including biogeochemical cycling, nutrient availability, and structuring ecosystems by providing settlement cues to some invertebrates. Microbial associates have been shown to be key players in coral biology, serving functions such as fixing nitrogen, chelating iron, cycling waste products, and producing antibiotics to keep unwanted microbes from infecting the coral.
USGS identifies, characterizes, and enumerates environmental microbial communities, which are critical components of healthy marine ecosystems such as coral reefs, chemosynthetic seeps, and submarine canyons, with focus on coral microbiomes (both shallow and deep-sea), ecosystem metagenomics, and biodiversity.
Characterizing the microbial communities associated with deep-sea corals in these environments will increase the knowledge of the biodiversity in these ecosystems and provide insight into the variability or uniqueness of the corals between deep-sea environments.
Paleoclimatology
Paleoclimatology is the study of past climates using evidence found in a variety of the Earth's surfaces. USGS scientists are using long-lived black corals as archives to determine the climate and ocean chemistry over hundreds to thousands of years. Deep-sea corals are extremely useful in determining past climates, and recent developments in coral sampling techniques, as well as the ability to study corals in a wide variety of geographic areas, has increased the value of using deep-sea corals for climate change studies. Coral skeletons have rings, similar to trees, that help scientists determine environmental cycles and ocean variability.
Population Genetics
Population genetics is the study of genetic variation within and between populations. Understanding how the biodiversity of corals and other invertebrates is distributed throughout the deep-sea environment can help guide management of sensitive species, especially in areas of interest to oil and gas exploration. USGS uses genetic tools to characterize biodiversity and local and regional patterns of genetic connectivity among deep-sea coral habitats.
For more information:
CSA Ocean Sciences Inc. Ross S, Brooke S, Baird E, Coykendall E, Davies A, Demopoulos A, France S, Kellogg C, Mather R, Mienis F, Morrison C, Prouty N, Roark B, Robertson C. 2017. Exploration and Research of Mid-Atlantic Deepwater Hard Bottom Habitats and Shipwrecks with Emphasis on Canyons and Coral Communities: Atlantic Deepwater Canyons Study. Draft Report. Sterling (VA): U.S. Dept. of the Interior, Bureau of Ocean Energy Management, Atlantic OCS Region. OCS Study BOEM 2017-060. 1,000 p. + apps.
Below are science projects associated with DISCOVRE.
Below are publications associated with this project.
The geochemistry of deep-sea coral skeletons: a review of vital effects and applications for palaeoceanography
Self-recognition in corals facilitates deep-sea habitat engineering
Comparison of DNA preservation methods for environmental bacterial community samples
Cultured fungal associates from the deep-sea coral Lophelia pertusa
Deepwater Program: Studies of Gulf of Mexico lower continental slope communities related to chemosynthetic and hard substrate habitats
Impact of the Deepwater Horizon oil spill on a deep-water coral community in the Gulf of Mexico
Characterization of culturable bacteria isolated from the cold-water coral Lophelia pertusa
Microbial consortia of gorgonian corals from the Aleutian islands
Growth rate and age distribution of deep-sea black corals in the Gulf of Mexico
Genetic discontinuity among regional populations of Lophelia pertusa in the North Atlantic Ocean
Food-web structure of seep sediment macrobenthos from the Gulf of Mexico
Enumeration of viruses and prokaryotes in deep-sea sediments and cold seeps of the Gulf of Mexico
Below are news stories associated with this project.
Below are partners associated with this project.
- Overview
DISCOVRE (DIversity, Systematics and COnnectivity of Vulnerable Reef Ecosystems) is an integrated, multidisciplinary, international effort investigating the unique and fragile deep-sea coral environments from the microscopic level to the ecosystem level.
Deep-Sea Coral ResourcesCheck out the links below for more information on deep-sea corals.
The Deep Sea
The deep sea refers to anything below 200 m depth in the ocean; beyond this depth, little to no sunlight reaches, temperatures drop, and pressure increases. Yet, life persists. Diverse environments, such as trenches, canyons, volcanoes, and seamounts, scattered over the seafloor are home to a diversity of fishes, crustaceans, anemones, sea stars, and corals.
Deep-sea corals are as colorful and diverse as their shallow-water counterparts, however, because of the lack of sunlight, deepwater corals obtain energy by using their tentacles to capture prey rather than through photosynthesis. Deep-sea coral reefs provide food and shelter for marine life, including commercially and recreationally important species, and play a critical role in the aquatic food web.
To better understand these little explored yet vital deep-sea coral reef ecosystems, USGS scientists from around the Nation contribute their expertise to the DISCOVRE effort. The multi-disciplinary approach examines components of microbiology, population genetics, paleoecology, food webs, taxonomy, community ecology, physical oceanography, seafloor characteristics, and submarine hazards. DISCOVRE relies on a network of partners from around the country and world, including the Bureau of Ocean Energy Management, National Oceanic and Atmospheric Administration (NOAA), and academic institutions. Using innovative tools and technologies, USGS scientists implement a multi-faceted research program that weaves together expertise in a variety of disciplines to investigate deepwater reefs.
Benthic Ecology
Benthic ecology is the term scientists use to describe the study of the animals living in or on the bottom of a water body. As part of the DISCOVRE project, the Benthic Ecology Group conducts research to understand community structure, biodiversity, trophic structure, and habitat connectivity of marine benthic ecosystems. The work involves examining the animals living in and on the seafloor in a variety of natural and artificial marine habitats:
- deep-sea and shallow-water corals,
- chemosynthetic seeps,
- shipwrecks,
- marine canyons, and
- wetland communities.
Marine Geology and Geophysics
Geology and geophysics refer to the study of physical structure and associated processes occurring on the planet. The USGS marine geology and geophysics team maps seafloor morphology and images the shallow sub-seafloor structure of the canyons, plateaus, and other components of the deep-sea landscape to better understand the processes that form and shape these features. Sampling sediment and rocks allows scientists to ground truth geophysical and visual observations, while providing valuable information about the composition and age of these underwater geologic environments.
Microbial Ecology
Microbial ecology is the study of microbes (bacteria, archaea, fungi, viruses), how they interact with each other, their host (if they are living on/in a plant or animal), and their environment.
Microbes are responsible for important ecosystem services, including biogeochemical cycling, nutrient availability, and structuring ecosystems by providing settlement cues to some invertebrates. Microbial associates have been shown to be key players in coral biology, serving functions such as fixing nitrogen, chelating iron, cycling waste products, and producing antibiotics to keep unwanted microbes from infecting the coral.
USGS identifies, characterizes, and enumerates environmental microbial communities, which are critical components of healthy marine ecosystems such as coral reefs, chemosynthetic seeps, and submarine canyons, with focus on coral microbiomes (both shallow and deep-sea), ecosystem metagenomics, and biodiversity.
Characterizing the microbial communities associated with deep-sea corals in these environments will increase the knowledge of the biodiversity in these ecosystems and provide insight into the variability or uniqueness of the corals between deep-sea environments.
Paleoclimatology
Paleoclimatology is the study of past climates using evidence found in a variety of the Earth's surfaces. USGS scientists are using long-lived black corals as archives to determine the climate and ocean chemistry over hundreds to thousands of years. Deep-sea corals are extremely useful in determining past climates, and recent developments in coral sampling techniques, as well as the ability to study corals in a wide variety of geographic areas, has increased the value of using deep-sea corals for climate change studies. Coral skeletons have rings, similar to trees, that help scientists determine environmental cycles and ocean variability.
Population Genetics
Population genetics is the study of genetic variation within and between populations. Understanding how the biodiversity of corals and other invertebrates is distributed throughout the deep-sea environment can help guide management of sensitive species, especially in areas of interest to oil and gas exploration. USGS uses genetic tools to characterize biodiversity and local and regional patterns of genetic connectivity among deep-sea coral habitats.
For more information:
CSA Ocean Sciences Inc. Ross S, Brooke S, Baird E, Coykendall E, Davies A, Demopoulos A, France S, Kellogg C, Mather R, Mienis F, Morrison C, Prouty N, Roark B, Robertson C. 2017. Exploration and Research of Mid-Atlantic Deepwater Hard Bottom Habitats and Shipwrecks with Emphasis on Canyons and Coral Communities: Atlantic Deepwater Canyons Study. Draft Report. Sterling (VA): U.S. Dept. of the Interior, Bureau of Ocean Energy Management, Atlantic OCS Region. OCS Study BOEM 2017-060. 1,000 p. + apps.
- Science
Below are science projects associated with DISCOVRE.
- Publications
Below are publications associated with this project.
Filter Total Items: 103The geochemistry of deep-sea coral skeletons: a review of vital effects and applications for palaeoceanography
Deep-sea corals were discovered over a century ago, but it is only over recent years that focused efforts have been made to explore the history of the oceans using the geochemistry of their skeletal remains. They offer a promising archive of past oceanic environments given their global distribution, layered growth patterns, longevity and preservation as well as our ability to date them using radioAuthorsLaura F. Robinson, Jess F. Adkins, Norbert Frank, Alexander C. Gagon, Nancy G. Prouty, E. Brendan Roark, Tina van de FlierdtSelf-recognition in corals facilitates deep-sea habitat engineering
The ability of coral reefs to engineer complex three-dimensional habitats is central to their success and the rich biodiversity they support. In tropical reefs, encrusting coralline algae bind together substrates and dead coral framework to make continuous reef structures, but beyond the photic zone, the cold-water coral Lophelia pertusa also forms large biogenic reefs, facilitated by skeletal fusAuthorsSebastian J Hennige, Cheryl L. Morrison, Armin U. Form, Janina Buscher, Nicholas A. Kamenos, J. Murray RobertsComparison of DNA preservation methods for environmental bacterial community samples
Field collections of environmental samples, for example corals, for molecular microbial analyses present distinct challenges. The lack of laboratory facilities in remote locations is common, and preservation of microbial community DNA for later study is critical. A particular challenge is keeping samples frozen in transit. Five nucleic acid preservation methods that do not require cold storage werAuthorsMichael A. Gray, Zoe A. Pratte, Christina A. KelloggCultured fungal associates from the deep-sea coral Lophelia pertusa
The cold-water coral Lophelia pertusa provides important habitat to many deep-sea fishes and invertebrates. Studies of the microbial taxa associated with L. pertusa thus far have focused on bacteria, neglecting the microeukaryotic members. This is the first study to culture fungi from living L. pertusa and to investigate carbon source utilization by the fungal associates. Twenty-seven fungal isolaAuthorsJulia P. Galkiewicz, Sarah H. Stellick, Michael A. Gray, Christina A. KelloggDeepwater Program: Studies of Gulf of Mexico lower continental slope communities related to chemosynthetic and hard substrate habitats
This report summarizes research funded by the U.S. Geological Survey (USGS) in collaboration with the University of North Carolina at Wilmington (UNCW) on the ecology of deep chemosynthetic communities in the Gulf of Mexico. The research was conducted at the request of the U.S. Bureau of Ocean Energy Management, Regulation and Enforcement (BOEMRE; formerly Minerals Management Service) to complemenAuthorsSteve W. Ross, Amanda W.J. Demopoulos, Christina A. Kellogg, Cheryl L. Morrison, Martha S. Nizinski, Cheryl L. Ames, Tara L. Casazza, Daniel Gualtieri, Kaitlin Kovacs, Jennifer P. McClain, Andrea M. Quattrini, Adela Y. Roa-Varon, Andrew D. ThalerImpact of the Deepwater Horizon oil spill on a deep-water coral community in the Gulf of Mexico
To assess the potential impact of the Deepwater Horizon oil spill on offshore ecosystems, 11 sites hosting deep-water coral communities were examined 3 to 4 mo after the well was capped. Healthy coral communities were observed at all sites >20 km from the Macondo well, including seven sites previously visited in September 2009, where the corals and communities appeared unchanged. However, at one sAuthorsHelen K. White, Pen-Yuan Hsing, Walter Cho, Timothy M. Shank, Erik E. Cordes, Andrea M. Quattrini, Robert K. Nelson, Richard Camilli, Amanda W.J. Demopoulos, Christopher R. German, James M. Brooks, Harry H. Roberts, William Shedd, Christopher M. Reddy, Charles R. FisherCharacterization of culturable bacteria isolated from the cold-water coral Lophelia pertusa
Microorganisms associated with corals are hypothesized to contribute to the function of the host animal by cycling nutrients, breaking down carbon sources, fixing nitrogen, and producing antibiotics. This is the first study to culture and characterize bacteria from Lophelia pertusa, a cold-water coral found in the deep sea, in an effort to understand the roles that the microorganisms play in the cAuthorsJulia P. Galkiewicz, Zoe A. Pratte, Michael A. Gray, Christina A. KelloggMicrobial consortia of gorgonian corals from the Aleutian islands
Gorgonians make up the majority of corals in the Aleutian archipelago and provide critical fish habitat in areas of economically important fisheries. The microbial ecology of the deep-sea gorgonian corals Paragorgea arborea, Plumarella superba, and Cryogorgia koolsae was examined with culture-based and 16S rRNA gene-based techniques. Six coral colonies (two per species) were collected. Samples froAuthorsMichael A. Gray, Robert P. Stone, Molly R. McLaughlin, Christina A. KelloggGrowth rate and age distribution of deep-sea black corals in the Gulf of Mexico
Black corals (order Antipatharia) are important long-lived, habitat-forming, sessile, benthic suspension feeders that are found in all oceans and are usually found in water depths greater than 30 m. Deep-water black corals are some of the slowest-growing, longest-lived deep-sea corals known. Previous age dating of a limited number of black coral samples in the Gulf of Mexico focused on extrapolateAuthorsN.G. Prouty, E.B. Roark, N.A. Buster, Steve W. RossGenetic discontinuity among regional populations of Lophelia pertusa in the North Atlantic Ocean
Knowledge of the degree to which populations are connected through larval dispersal is imperative to effective management, yet little is known about larval dispersal ability or population connectivity in Lophelia pertusa, the dominant framework-forming coral on the continental slope in the North Atlantic Ocean. Using nine microsatellite DNA markers, we assessed the spatial scale and pattern of genAuthorsC.L. Morrison, Steve W. Ross, M.S. Nizinski, S. Brooke, J. Jarnegren, R.G. Waller, Robin L. Johnson, T.L. KingFood-web structure of seep sediment macrobenthos from the Gulf of Mexico
The slope environment of the Gulf of Mexico (GOM) supports dense communities of seep megafaunal invertebrates that rely on endosymbiotic bacteria for nutrition. Seep sediments also contain smaller macrofaunal invertebrates whose nutritional pathways are not well understood. Using stable-isotope analysis, we investigate the utilization of chemosynthetically fixed and methane-derived organic matterAuthorsAmanda W.J. Demopoulos, Daniel Gualtieri, Kaitlin KovacsEnumeration of viruses and prokaryotes in deep-sea sediments and cold seeps of the Gulf of Mexico
Little is known about the distribution and abundance of viruses in deep-sea cold-seep environments. Like hydrothermal vents, seeps support communities of macrofauna that are sustained by chemosynthetic bacteria. Sediments close to these communities are hypothesized to be more microbiologically active and therefore to host higher numbers of viruses than non-seep areas. Push cores were taken at fiveAuthorsChristina A. Kellogg - Web Tools
- News
Below are news stories associated with this project.
Filter Total Items: 40 - Partners
Below are partners associated with this project.