Software

Biology and Ecosystems

Learn more about animal population analysis, and access, explore, and download U.S. species occurrence data.

Filter Total Items: 59
Date published: July 3, 2018

Bandit Data Entry Template

Before using the Excel template that can be downloaded at the end of this page, please read this important information:

Date published: July 3, 2018

Bandit Software

Bandit is the latest in a series of desktop applications aimed at helping bird banders manage and submit their data for banded birds. We have tried to make the process of maintaining banding records as simple as possible. Bandit was created by the Bird Banding Laboratory (BBL) at the USGS Patuxent Wildlife Research Center, Laurel, MD.

Date published: July 2, 2018

PRESENCE

Estimates patch occupancy rates and related parameters.

Date published: June 25, 2018

iPlover

iPlover was developed by the U.S. Geological Survey Woods Hole Coastal and Marine Science Center and the USGS Center for Integrated Data Analytics.  It is used by trained and vetted personnel to record information about habitats on coastal beaches and he environment surrounding them. 

Date published: April 23, 2018

Ecosheds.org

LSC Conte Anadrmous Fish Laboratory is currently involved in https://ecosheds.org.

Date published: January 26, 2018

Composite Raster and Divergence Tool

The Composite Raster and Divergence Tool is an ArcGIS ArcMap add-in

Date published: January 25, 2018

SPARROW modeling: Estimating contaminant transport

 

What’s New: A new version of the SPARROW code is being developed in the R programming language. The advantage of R is that it is non-proprietary and does not require a license or software cost. The R – SPARROW code is now being completed and should be available early in CY18. Stay Tuned.

Date published: November 14, 2017

fatalityCMR

Capture-recapture software to correct raw counts of wildlife fatalities using trial experiments for carcass detecition probability and persistence time.

Date published: July 7, 2017

ScienceCache

ScienceCache is a scientific geocaching mobile application framework.  By melding training and games into the hunt for place-based data collection sites, and incorporating photo uploads as data or for authentication, new volunteers can collaborate in robust data collection. As a volunteer, simply download the ScienceCache app, choose a route, and then follow the directions to collect data.  ...

Date published: July 6, 2017

Evidence of Absence (EoA) Software and User's Guide

Software to Estimate Bird and Bat Fatality at Wind Farms

Date published: May 31, 2017

eDNAoccupancy

eDNAoccupancy allows users to specify and fit multi-scale occupancy models with or without covariates, to estimate posterior summaries of occurrence and detection probabilities, and to compare different models using Bayesian model-selection criteria.

Date published: April 12, 2017

Evolutionary Ecology Software

The programs perform input file formation, distribution visualization, individual-based dynamic population simulation, pedigree accuracy assessment, effective population si