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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 3751

Complex evolutionary history of felid anelloviruses

Anellovirus infections are highly prevalent in mammals, however, prior to this study only a handful of anellovirus genomes had been identified in members of the Felidae family. Here we characterise anelloviruses in pumas (Puma concolor), bobcats (Lynx rufus), Canada lynx (Lynx canadensis), caracals (Caracal caracal) and domestic cats (Felis catus). The complete anellovirus genomes (n = 220) recove
Authors
Simona Kraberger, Laurel EK Serieys, Cécile Richet, Nicholas M Fountain-Jones, Guy Baele, Jacqueline M. Bishop, Mary Nehring, Jacob S. Ivan, Eric S. Newkirk, John R. Squires, Michael C. Lund, Seth P. D. Riley, Christopher C. Wilmers, Paul D. van Helden, Koenraad Van Doorslaer, Melanie Culver, Sue VandeWoude, Darren P. Martin, Arvind Varsani

Northern bobwhite occupancy patterns on multiple spatial scales across Arkansas

Northern bobwhite Colinus virginianus populations have been rapidly declining in the eastern, central, and southern United States for decades. Land use change and an incompatibility between northern bobwhite resource needs and human land use practices have driven declines. Here, we applied occupancy analyses on two spatial scales (state level and ecoregion level) to more than 5,000 northern bobwhi
Authors
E. V. Lassiter, M. Asher, G. Christie, C. Gale, A. Massey, C. Massery, C. R. MIddaugh, J. Veon, Brett Alexander DeGregorio

Accuracy of histology, endoscopy, ultrasonography, and plasma sex steroids in describing the population reproductive structure of hatchery-origin and wild white sturgeon

Hatchery-origin white sturgeon Acipenser transmontanus in the lower Columbia River, Canada are approaching puberty, and describing the reproductive structure of the population is critical to determine if they are capable of contributing to spawning events in the wild, a key management uncertainty. Few studies have compared the accuracy of available tools (histology, ultrasound, endoscopy, and plas
Authors
Paige A. C. Maskill, James A. Crossman, Molly A. H. Webb, Marco M. Marrello, Christopher S. Guy

Genetic diversity and structure in Arizona pronghorn following conservation efforts

Arizona pronghorn (Antilocapra americana) population numbers have declined over the last century due to unregulated-harvest, population fragmentation, urban expansion, and habitat loss. Captive breeding, reintroductions, and translocations have helped to curb decline and boost population numbers of the endangered Sonoran subspecies (A. a. sonoriensis). To assess the effect of on-going management a
Authors
Erin E. Vaughn, Melanie Culver

Recruitment bottlenecks for age-0 walleye in northern Wisconsin lakes

Some northern Wisconsin lakes have shown declines in catches of age-0 Walleye Sander vitreus in standardized fall electrofishing sampling, suggesting that recruitment bottlenecks are occurring in the first several months of life. In 2016 and 2017, we sampled six lakes with declining trends in natural Walleye recruitment (D-NR lakes) and seven lakes with a history of sustained natural recruitment (
Authors
Jason Gostiaux, Hadley I. A. Boehm, Nathan J. Jaksha, Daniel J. Dembkowski, Joseph M. Hennessy, Daniel A. Isermann

Sexual dimorphism in morphology and plumage of endangered Yuma Ridgway’s Rails: A model for documenting sex

Many applications in wildlife management require knowledge of the sex of individual animals. The Yuma Ridgway's rail Rallus obsoletus yumanensis is an endangered marsh bird with monomorphic plumage and secretive behaviors, thereby complicating sex determination in field studies. We collected morphometric measurements from 270 adult Yuma Ridgway's rails and quantified the plumage and mandible color
Authors
Courtney J. Conway, E. J. Harrity, L. E. Michael

Diets and stable isotope signatures of native and nonnative Leucisid fishes advances our understanding of the Yellowstone Lake food web

(1) Many forage fishes, such as Leucisids (minnows) have depauperate studies on diet composition or stable isotope signatures, as these fishes are often only viewed as food for higher trophic levels. The need exists to understand and document the diet and stable isotope signatures of Leucisids (redside shiner, longnose dace, lake chub) in relation to the community ecology and food-web dynamics in
Authors
Hayley C. Glassic, Christopher S. Guy, Todd M. Koel

Spatial and temporal overlap between foraging shorebirds and spawning horseshoe crabs (Limulus polyphemus) in the Cape Romain-Santee Delta Region of the U.S. Atlantic coast

Shorebird use of horseshoe crab (Limulus polyphemus) eggs as food items has been well documented along the Atlantic coast of the United States at northeastern stopover sites such as the Delaware Bay. However, the relationship between migratory shorebirds and horseshoe crab eggs has not been well studied in the South Atlantic Bight. The objective of our study was to assess the spatial and temporal
Authors
F. Takahashi, F. Sanders, Patrick Jodice

Habitat diversity influences puma (Puma concolor) diet in the Chihuahuan Desert

Habitat heterogeneity and corresponding diversity in potential prey species should increase the diet breadth of generalist predators. Many previous studies describing puma Puma concolor diets in the arid regions of the southwestern United States were focused within largely xeric locations, overlooking the influence of heterogeneity created by riparian forests. Such habitat heterogeneity and corres
Authors
Charles H. Prude, James W. Cain III

Feather corticosterone reveals developmental challenges in a long-term study of juvenile northern spotted owls

Corticosterone is a steroid hormone integral to a variety of physiological pathways and is strongly associated with the vertebrate stress response. In avian species, circulating corticosterone is sequestered into developing feathers and is used as an indicator of energy allocation during feather growth and widely applied in conservation physiology.The northern spotted owl Strix occidentalis caurin
Authors
Ashlee J. Mikkelsen, Damon B. Lesmeister, Kathleen M. O'Reilly, Katie Dugger

Growth inhibition of the harmful alga Prymnesium parvum by plant-derived products and identification of ellipticine as highly potent allelochemical

Prymnesium parvum is a toxin-producing harmful alga that has caused ecological and economic damage worldwide. Effective methods to control blooms of this species in the field, however, are unavailable. This study examined five natural compounds present in the invasive plant Arundo donax and one synthetic derivative (5,6-dichlorogramine) for their effect on P. parvum growth. All compounds except on
Authors
Mousumi Mary, R. H. Rashel, Reynaldo Patiño

Projected impact of sea-level rise and urbanization on mottled duck (Anas fulvigula) habitat along the Gulf Coast of Louisiana and Texas through 2100

Coastal wetlands along the Gulf of Mexico support a wide diversity of wildlife, are important nurseries for sport and commercial fisheries, provide erosion and flood control, and serve many other ecological functions and services. These marshes have been declining in area and degrading at alarming rates since the 1930s. Effective conservation planning is vital to protect these ecosystems, but deci
Authors
J.A. Moon, S.E. Lehnen, K.L. Metzger, M.A. Squires, M.G. Brasher, B.C. Wilson, W.C. Conway, David A. Haukos, B.E. Davis, F.C. Rohwer, E.M. Wehland, B.M. Ballard