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A novel framework to predict relative habitat selection in aquatic systems: Applying machine learning and resource selection functions to acoustic telemetry data from multiple shark species

April 29, 2021

Resource selection functions (RSFs) have been widely applied to animal tracking data to examine relative habitat selection and to help guide management and conservation strategies. While readily used in terrestrial ecology, RSFs have yet to be extensively used within marine systems. As acoustic telemetry continues to be a pervasive approach within marine environments, incorporation of RSFs can provide new insights to help prioritize habitat protection and restoration to meet conservation goals. To overcome statistical hurdles and achieve high prediction accuracy, machine learning algorithms could be paired with RSFs to predict relative habitat selection for a species within and even outside the monitoring range of acoustic receiver arrays, making this a valuable tool for marine ecologists and resource managers. Here, we apply RSFs using machine learning to an acoustic telemetry dataset of four shark species to explore and predict species-specific habitat selection within a marine protected area. In addition, we also apply this RSF-machine learning approach to investigate predator-prey relationships by comparing and averaging tiger shark relative selection values with the relative selection values derived for eight potential prey-species. We provide methodological considerations along with a framework and flexible approach to apply RSFs with machine learning algorithms to acoustic telemetry data and suggest marine ecologists and resource managers consider adopting such tools to help guide both conservation and management strategies.

Publication Year 2022
Title A novel framework to predict relative habitat selection in aquatic systems: Applying machine learning and resource selection functions to acoustic telemetry data from multiple shark species
DOI 10.3389/fmars.2021.631262
Authors Lucas P. Griffin, Grace A. Casselberry, Kristen Hart, Adrian Jordaan, Sarah L. Becker, Ashleigh J. Novak, Bryan M. DeAngelis, Clayton G. Pollock, Ian Lundgren, Zandy Hillis-Starr, Andy J. Danylchuk, Gregory B. Skomal
Publication Type Article
Publication Subtype Journal Article
Series Title Frontiers in Marine Science
Index ID 70229209
Record Source USGS Publications Warehouse
USGS Organization Wetland and Aquatic Research Center