Don DeAngelis, Ph.D.
Don DeAngelis is a Senior Scientist and Research Ecologist at the USGS Wetland and Aquatic Research Center.
RESEARCH
Donald DeAngelis is an ecologist, specializing in mathematical and simulation modeling. He was one of the early developers of individual-based modeling (IBM) in population ecology, and has applied IBM to fish and other populations. Among his other interests are modeling of vegetation succession, nutrient cycling, mutualistic interactions, and food webs. He is coordinator of the Across Trophic Level System Simulation (ATLSS) Program, a multi-project, multi-investigator program with the objective of providing simulation models to assist Everglades restoration.
BACKGROUND
1994-present, Ecologist, U. S. Geological Survey, Biological Resources Division, Florida Caribbean Science Center, Department of Biology, University of Miami, Coral Gables, FL 33124 Research Faculty Associate Professor, Department of Biology, University of Miami
Editor, The American Naturalist, 2004 -present
Editorial Boards
Currently: Ecological Complexity
Previously: Ecosystems, Mathematical Biosciences, Ecology, Ecological Monographs, Nonlier World, Journal of Aquatic Stress and Recovery Awards Fellow of American Association for the Advancement of Science, 1983 Martin Marietta Energy Systems, Inc. Technical Publications Award, 1986 Martin Marietta Energy Systems, Inc. Technical Publications Award, 1987 First Place, 1990 International Technical Publication Competition, sponsored by the Society for Technical Communication Martin Marietta Energy Systems, Inc., Technical Publications Award, 1991
Grants 'Spatial Gradients in Nutrient Recycling and Their Effect on Stream Ecosystem Stability'. National Science Foundation, April 1, 1991 - March 31, 1994, $1,419,019. Co-Principal Investigators, D. L. DeAngelis and P. J. Mulholland
'Compensatory Mechanisms in Fish Populations', Electric Power Research Institute. 1988 - 1996. Approximately $1 million per year. Principal Investigator, W. Van Winkle. D. L.
DeAngelis developed the approach used and wrote the initial funded proposal 'Synthesis of Species-Population Dynamics and Ecosystem Processes: Theoretical Study of the Stability and Development of Food Web Structure'. National Science Foundation, United States - Japan Cooperative Science Program. January 1, 1991 - December 31, 1992.Co-Principal Investigators, E. Teramoto and D. L. DeAngelis. Environmental Sciences Division Scientific Achievement Award for 1982 Areas of Focus Conservation and Restoration Biology Mathematical and Theoretical Biology
Education and Certifications
Ph.D., Engineering and Applied Science (Plasma Physics), Yale University, 1972
B.S., Physics, Massachusetts Institute of Technology, 1966
Science and Products
Across Trophic Level System Simulation (ATLSS) Program for the Greater Everglades
Decision Analysis to Help Improve the Effectiveness of Invasive Plants Management
Joint Ecosystem Modeling: EverSnail
Assessing the Past and Potential Future Impacts of Salt Water Intrusion on Tidal Swamp Habitat along the South Atlantic Coast
Developing the next generation of USGS resource assessments
How will Florida’s Biodiversity Respond to Climate Change?
Data for aerial dispersal of Lygodium microphyllum spores within Arthur R. Marshall Loxahatchee National Wildlife Refuge, 2003 - 2004
Scaling antibiotic efficacy from cells to metapopulations
Modeling soil pore water salinity response to drought in tidal freshwater forested wetlands
Carrying capacity in a heterogeneous environment with habitat connectivity
Resource-driven pattern formation in consumer-resource systems with asymmetric dispersal on a plane
Global potential distribution of mangroves: Taking into account salt marsh interactions along latitudinal gradients
Ecological benefits of integrative weed management of Melaleuca quinquenervia in Big Cypress National Preserve
Less is more: Less herbicide does more when biological control is present in Pontederia crassipes
Seed dispersal and tree legacies influence spatial patterns of plant invasion dynamics
Enhancing the predictability of ecology in a changing world: A call for an organism-based approach
Book review: Quasispecies as a unifying concept in population dynamics
A generically parameterized model of Lake eutrophication: The impact of Stoichiometric ratios and constraints on the abundance of natural phytoplankton communities (GPLake-S)
Wading bird foraging on a wetland landscape: A comparison of two strategies
Aerial dispersal of Lygodium microphyllum spores within Arthur R. Marshall Loxahatchee National Wildlife Refuge
Modeling the impact of invasive species litter on conditions affecting its spread and potential regime shift
Hierarchical functional response of a forager on a wetland landscape
Science and Products
- Science
Across Trophic Level System Simulation (ATLSS) Program for the Greater Everglades
Goals of the ATLSS Program are to help achieve a better understanding of components of the Everglades ecosystem, to provide an integrative tool for empirical studies, and to apply these tools to an adaptive management framework.Decision Analysis to Help Improve the Effectiveness of Invasive Plants Management
Melaleuca is an invasive tree that is highly problematic in the Everglades, threatening native wildlife and habitat. USGS is helping to improve management strategies for the invasive plant.Joint Ecosystem Modeling: EverSnail
EverSnail, developed in collaboration with the University of West Florida, is an age- and size-structured spatially-explicit landscape model of native apple snails ( Pomacea paludosa ).Assessing the Past and Potential Future Impacts of Salt Water Intrusion on Tidal Swamp Habitat along the South Atlantic Coast
Using historical aerial photogrammetry, satellite imagery, or recent vegetation mapping efforts, as well as various models, USGS investigates salt water intrusion impacts on coastal habitats along the southern Atlantic coast.Developing the next generation of USGS resource assessments
Resource assessments constitute a key part of the USGS mission, and represent a crucial contribution toward Department of the Interior (DOI) and broader Federal objectives. Current USGS energy and mineral assessment methods evaluate total technically recoverable resources (energy) or economically exploitable materials (minerals); the fiscal year 2010 budget for this work is $82M. To help stakeholHow will Florida’s Biodiversity Respond to Climate Change?
Florida is home to 50 endangered species, 23 National Wildlife Refuges, 9 national parks, and 119 state parks. Straddling both temperate and sub-tropical zones, the state is also unique in that it is a long and narrow peninsula, surrounded on three sides by warm water, creating a dynamic environment. The impacts of climate change, such as sea-level rise and severe storms, threaten the state’s uniq - Data
Data for aerial dispersal of Lygodium microphyllum spores within Arthur R. Marshall Loxahatchee National Wildlife Refuge, 2003 - 2004
Old World Climbing Fern (Lygodium microphyllum (Cav.) R. Br.) is an invasive plant species threatening South Florida ecosystems. In 1989 L. microphyllum was observed in the Arthur R. Marshall Loxahatchee National Wildlife Refuge. L. microphyllum has attributes that allow it to thrive in South Florida. It produces a huge number of small spores that are easily suspended by wind and dispersed, have aScaling antibiotic efficacy from cells to metapopulations
The data are population sizes of yeast Saccharaomyces cerevisiae growth in laboratory cultures over a period of several days with different levels of growth inhibitor cycloheximide and of nutrient levels.Modeling soil pore water salinity response to drought in tidal freshwater forested wetlands
Model generated soil pore water salinity (psu) values under scenarios of drought and normal conditions at Tidal Freshwater Forested Wetlands (TFFW) sites along the Waccamaw River and Savannah River in the Southeastern United States.Carrying capacity in a heterogeneous environment with habitat connectivity
The data are population sizes of yeast Saccharaomyces cerevisiae growth in laboratory cultures over a period of several days with different levels of growth inhibitor cycloheximide. - Publications
Filter Total Items: 188
Resource-driven pattern formation in consumer-resource systems with asymmetric dispersal on a plane
This paper considers resource-driven pattern formation in consumer-resource systems. Here, a planar pattern consists of many big patches, and a big patch can be regarded as combination of many patches on the plane. The consumer moves between patches asymmetrically, while the asymmetry is driven by the resource abundance. Based on experimental models with linearly-linked patches, we propose a planaAuthorsWeiting Song, Shikun Wang, Yuanshi Wang, Don DeAngelisGlobal potential distribution of mangroves: Taking into account salt marsh interactions along latitudinal gradients
Mangrove is one of the most productive and sensitive ecosystems in the world. Due to the complexity and specificity of mangrove habitat, the development of mangrove is regulated by several factors. Species distribution models (SDMs) are effective tools to identify the potential habitats for establishing and regenerating the ecosystem. Such models usually include exclusively environmental factors.AuthorsLina Cui, Don DeAngelis, Uta Berger, Minmin Cao, Yaqi Zhang, Xiaomin Zhang, Jiang JiangEcological benefits of integrative weed management of Melaleuca quinquenervia in Big Cypress National Preserve
The southern tip of North America coalesces into one of the world’s largest freshwater wetlands, the Everglades, Florida, USA. Though this region is much like an island, home to high biodiversity and endemism, it is also the site of a century of development and associated landscape-scale species invasions. Melaleuca quinquenervia (hereafter melaleuca), a tree native to tropical Australia, was planAuthorsMelissa C. Smith, Paul Julien, Don DeAngelis, Bo ZhangLess is more: Less herbicide does more when biological control is present in Pontederia crassipes
An experiment along with simulation modeling was applied to study the combinations of herbicide treatment and biological control that best limit invasive water hyacinth (Pontederia crassipes, formerly Eichhornia crassipes) in freshwater aquatic systems. The experiment consisted of 14 different treatments of P. crassipes in 1.67 m2 outdoor tank mesocosms. Seven treatments were with and seven were wAuthorsLinhao Xu, Ashley B.C. Goode, Philip W. Tipping, Melissa C. Smith, Lyn A. Gettys, Brittany K. Knowles, Eileen Pokorny, Luz Salinas, Don DeAngelisSeed dispersal and tree legacies influence spatial patterns of plant invasion dynamics
Invasive plant species alter community dynamics and ecosystem properties, potentially leading to regime shifts. Here, the invasion of a non-native tree species into a stand of native tree species is simulated using an agent-based model. The model describes an invasive tree with fast growth and high seed production that produces litter with a suppressive effect on native seedlings, based loosely onAuthorsYuanming Lu, Junfei Xia, Lukas J. Magee, Don DeAngelisEnhancing the predictability of ecology in a changing world: A call for an organism-based approach
Ecology is usually very good in making descriptive explanations of what is observed, but is often unable to make predictions of the response of ecosystems to change. This has implications in a human-dominated world where a suite of anthropogenic stresses are threatening the resilience and functioning of ecosystems that sustain mankind through a range of critical regulating and supporting services.AuthorsC.J.M. Musters, Don DeAngelis, Jeffrey A. Harvey, Wolf M. Mooij, Peter M. van Bodegom, Geert R. de SnooBook review: Quasispecies as a unifying concept in population dynamics
The quasispecies concept had two independent origins. One source was the theoretical ideas of Manfred Eigen and Peter Schuster in the 1970s. Studying the self-organization and evolution of primitive RNA molecules, they defined quasispecies as a distribution of mutant viral genomes generated by the mutation-selection process. In particular, the quasispecies nucleotide distribution consists of a sinAuthorsDon DeAngelisA generically parameterized model of Lake eutrophication: The impact of Stoichiometric ratios and constraints on the abundance of natural phytoplankton communities (GPLake-S)
Water quality improvement to avoid excessive phytoplankton blooms often requires eutrophication management where both phosphorus (P) and nitrogen (N) play a role. While empirical eutrophication studies and ecological resource competition theory both provide insight into phytoplankton abundance in response to nutrient loading, they are not seamlessly linked in the current state of eutrophication reAuthorsManqi Chang, Donald L. DeAngelis, Jan H. Janse, Annette B.G. Janssen, Tineke A. Troost, Dianneke van Wijk, Wolf M. Mooij, Sven TeurlincxWading bird foraging on a wetland landscape: A comparison of two strategies
Tactile-feeding wading birds, such as wood storks and white ibises, require high densities of prey such as small fishes and crayfish to support themselves and their offspring during the breeding season. Prey availability in wetlands is often determined by seasonal hydrologic pulsing, such as in the subtropical Everglades, where spatial distributions of prey can vary through time, becoming heterogeAuthorsHyo Won Lee, Donald L. DeAngelis, Simeon Yurek, Stephen TennenbaumAerial dispersal of Lygodium microphyllum spores within Arthur R. Marshall Loxahatchee National Wildlife Refuge
Native across the Old World tropics from Africa to Southeast Asia and Australia, Lygodium microphyllum (Cav.) R. Br. (Old World Climbing Fern) is one of the most invasive plant species threatening South Florida ecosystems (Rodgers et al. 2014). This invasive fern was first collected as a naturalized plant in South Florida in the late 1960s (Beckner 1968). Subsequent populations were observed in thAuthorsAlison G. Snow, Laura A. Brandt, Ryan L. Lynch, Erynn M. Call, Scott M. Duke-Sylvester, Don DeAngelisModeling the impact of invasive species litter on conditions affecting its spread and potential regime shift
Many introduced plants pose invasion risks globally and threaten the biodiversity of native ecosystems. Such non-native plants can become invasive when they have advantages over native plants, such as having fewer natural enemies. Invasive plants often have the ability to alter ecosystem properties after they have become established, which can make it difficult to eliminate the invasive. In princiAuthorsYuanming Lu, Donald L. DeAngelis, Junfei Xia, Jiang JiangHierarchical functional response of a forager on a wetland landscape
We show that for some foragers the form that a functional response takes depends on the temporal and spatial scales considered. In representing the consumption rate of an organism, it may be necessary to use a hierarchy of functional responses. Consider, for example, a wading bird foraging in wetland landscape characterized by a spatial distribution of potential foraging sites, such as ponds. At tAuthorsDon DeAngelis, Simeon Yurek, Stephen Tennenbaum, Hyo Won Lee - News