Kaci K. VanDalen, Jeffrey S. Hall, Larry Clark, Robert G. McLean, Cynthia Smeraski. (2013) West Nile virus infection in American robins: New insights on dose response. PLoS One. 10.1371/journal.pone.0068537.
Jeffrey S Hall
Biography
Education
2001 Doctor of Philosophy, Comparative Pathobiology, University of Nebraska-Lincoln, Lincoln, NE
Professional Experience
Sept. 2007 - Present Research Virologist USGS-NWHC, Madison, WI
Sept. 2003 - Sept. 2007 Virologist/ Laboratory Manager USDA-APHIS-NWRC. Ft. Collins, CO
July 1997 - Sept. 2003 Microbiologist USDA-ARS. Lincoln, NE
March 1991 - July 1997 Research Associate Department of Plant Pathology. University of Nebraska-Lincoln, Lincoln, NE
Science and Products
Year Published: 2018
Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska
Western Alaska is a potential point-of-entry for foreign-origin influenza A viruses (IAVs) into North America via migratory birds. We sampled waterfowl and gulls for IAVs at Izembek National Wildlife Refuge (NWR) in western Alaska, USA, during late summer and autumn months of 2011–2015, to evaluate the abundance and diversity of viruses at this...
Reeves, Andrew B.; Hall, Jeffery S.; Poulson, Rebecca L.; Donnelly, Tyrone F.; Stallknecht, David E.; Ramey, Andrew M.Attribution: Alaska Science Center, National Wildlife Health Center
Year Published: 2018
Infectious canine hepatitis in a brown bear (Ursus arctos horribilis) from Alaska.
We diagnosed infectious canine hepatitis in a free-ranging brown bear (Ursus arctos horribilis) cub from Alaska, US, found dead in October 2015. Intranuclear inclusion bodies were present in hepatocytes, and immunohistochemistry showed reactivity to adenoviral antigens. Sequencing of the hexon protein of adenovirus showed 100% identity to canine...
Knowles, Susan N.; Bodenstein, Barbara; Hamon, Troy; Saxton, Michael W.; Hall, Jeffrey S.Attribution: National Wildlife Health Center
View Citation
J Wildl Dis. 2018 Mar 2. doi: 10.7589/2017-10-245. [Epub ahead of print]
Infectious Canine Hepatitis in a Brown Bear ( Ursus arctos horribilis) from Alaska.
Knowles S1, Bodenstein BL1, Hamon T2, Saxton MW2,3, Hall JS1.
Year Published: 2018
Inferring epidemiologic dynamics from viral evolution: 2014–2015 Eurasian/North American highly pathogenic avian influenza viruses exceed transmission threshold, R0 = 1, in wild birds and poultry in North America
Highly pathogenic avian influenza virus (HPAIV) is a multihost pathogen with lineages that pose health risks for domestic birds, wild birds, and humans. One mechanism of intercontinental HPAIV spread is through wild bird reservoirs, and wild birds were the likely sources of a Eurasian (EA) lineage HPAIV into North America in 2014. The introduction...
Grear, Daniel R.; Hall, Jeffrey S.; Dusek, Robert; Ip, Hon S.Attribution: National Wildlife Health Center
View Citation
Grear, D. A., Hall, J. S., Dusek, R. J., Ip, H. S. 2017. Inferring epidemiologic dynamics from viral evolution: 2014-2015 EA/NA highly pathogenic avian influenza viruses exceed transmission threshold, R0=1, in wild birds and poultry in North America. Evolutionary Applications. doi: 10.1111/eva.12576
Year Published: 2017
Experimental infection of common eider ducklings with Wellfleet Bay virus, a newly characterized orthomyxovirus
Wellfleet Bay virus (WFBV), a novel orthomyxovirus in the genus Quaranjavirus, was first isolated in 2006 from carcasses of common eider (Somateria mollissima) during a mortality event in Wellfleet Bay (Barnstable County, Massachusetts, USA) and has since been repeatedly isolated during recurrent mortality events in this location. Hepatic,...
Shearn-Bochsler, Valerie I.; Ip, Hon S.; Ballmann, Anne; Hall, Jeffrey S.; Allison, Andrew B.; Ballard, Jennifer R.; Ellis, Julie C.; Cook, Robert; Gibbs, Samantha E.J.; Dwyer, Chris P.Attribution: National Wildlife Health Center
Year Published: 2017
Lambdapapillomavirus 2 in a gray wolf (Canis lupus) from Minnesota with oral papillomatosis and sarcoptic mange
Oral papillomatosis was diagnosed in a gray wolf (Canis lupus) with sarcoptic mange from Minnesota, USA found dead in February 2015. Intranuclear inclusion bodies were evident histologically, and papillomaviral antigens were confirmed using immunohistochemistry. Sequencing of the L1 papillomavirus gene showed closest similarity to...
Knowles, Susan N.; Windels, Steve K.; Adams, Marie; Hall, Jeffrey S.Attribution: National Wildlife Health Center
Year Published: 2017
Prevalence and distribution of Wellfleet Bay virus exposure in the Common Eider (Somateria mollissima)
Between 1998 and 2014, recurrent mortality events were reported in the Dresser's subspecies of the Common Eider (Somateria mollissima dresseri) on Cape Cod, Massachusetts, USA near Wellfleet Harbor. The early die-offs were attributed to parasitism and emaciation, but beginning in 2006 a suite of distinct lesions was observed concomitant with the...
Ballard, Jennifer R.; Mickley, Randall M.; Gibbs, Samantha E.J.; Dwyer, Chris P.; Soos, Catherine; Harms, N. Jane; Gilchrist, H. Grant; Hall, Jeffrey S.; Franson, J. Christian; Milton, G. Randy; Parsons, Glen; Allen, Brad; Giroux, Jean-Francois; Lair, Stéphane; Mead, Daniel G.; Fischer, John R.Attribution: National Wildlife Health Center
View Citation
Jennifer R. Ballard, Randall Mickley, Samantha E.J. Gibbs, Chris Dwyer, Catherine Soos, N. Jane Harms, H. Grant Gilchrist, Jeffrey S. Hall, J. Christian Franson, G. Randy Milton, Glen Parsons, Brad Allen, Jean-Francois Giroux, Stéphane Lair, Daniel G. Mead, and John R. Fischer (2016) Prevalence and Distribution of Wellfleet Bay Virus Exposure in the Common Eider (Somateria mollissima). Journal of Wildlife Diseases In-Press.
Year Published: 2017
No evidence of infection or exposure to Highly Pathogenic Avian Influenzas in peridomestic wildlife on an affected poultry facility
We evaluated the potential transmission of avian influenza viruses (AIV) in wildlife species in three settings in association with an outbreak at a poultry facility: 1) small birds and small mammals on a poultry facility that was affected with highly pathogenic AIV (HPAIV) in April 2015; 2) small birds and small mammals on a nearby poultry...
Grear, Daniel A.; Dusek, Robert J.; Walsh, Daniel P.; Hall, Jeffrey S.Attribution: National Wildlife Health Center
Year Published: 2016
Antigenic characterization of H3 subtypes of avian influenza A viruses from North America
Besides humans, H3 subtypes of influenza A viruses (IAVs) can infect various animal hosts, including avian, swine, equine, canine, and sea mammal species. These H3 viruses are both antigenically and genetically diverse. Here, we characterized the antigenic diversity of contemporary H3 avian IAVs recovered from migratory birds in North America....
Bailey, Elizabeth; Long, Li-Pong; Zhao, Nan; Hall, Jeffrey S.; Baroch, John A; Nolting, Jaqueline; Senter, Lucy; Cunningham, Frederick L; Pharr, G Todd; Hanson, Larry; Slemons, Richard; DeLiberto, Thomas J.; Wan, Xiu-FengAttribution: National Wildlife Health Center
View Citation
Elizabeth Bailey, Li-Ping Long, Nan Zhao, Jeffrey S. Hall, John A. Baroch, Jacqueline Nolting, Lucy Senter, Frederick L. Cunningham, G. Todd Pharr, Larry Hanson, Richard Slemons, Thomas J. DeLiberto, and Xiu-Feng Wan (2016) Antigenic Characterization of H3 Subtypes of Avian Influenza A Viruses from North America. Avian Diseases: May 2016, Vol. 60, No. 1s, pp. 346-353.
Year Published: 2016
U.S. Geological Survey science strategy for highly pathogenic avian influenza in wildlife and the environment (2016–2020)
IntroductionThrough the Science Strategy for Highly Pathogenic Avian Influenza (HPAI) in Wildlife and the Environment, the USGS will assess avian influenza (AI) dynamics in an ecological context to inform decisions made by resource managers and policymakers from the local to national level. Through collection of unbiased scientific information on...
Harris, M. Camille; Pearce, John M.; Prosser, Diann J.; White, C. LeAnn; Miles, A. Keith; Sleeman, Jonathan M.; Brand, Christopher J.; Cronin, James P.; De La Cruz, Susan; Densmore, Christine L.; Doyle, Thomas W.; Dusek, Robert J.; Fleskes, Joseph P.; Flint, Paul L.; Guala, Gerald F.; Hall, Jeffrey S.; Hubbard, Laura E.; Hunt, Randall J.; Ip, Hon S.; Katz, Rachel A.; Laurent, Kevin W.; Miller, Mark P.; Munn, Mark D.; Ramey, Andrew M.; Richards, Kevin D.; Russell, Robin E.; Stokdyk, Joel P.; Takekawa, John Y.; Walsh, Daniel P.Attribution: National Wildlife Health Center, Alaska Science Center, Ecosystems, Science Analytics and Synthesis (SAS)
View Citation
Harris, M.C., Pearce, J.M., Prosser, D.J., White, C.L., Miles, A.K., Sleeman, J.M., Brand, C.J., Cronin, J.P., De La Cruz, S., Densmore, C.L., Doyle, T.W., Dusek, R.J., Fleskes, J.P., Flint, P.L., Guala, G.F., Hall, J.S., Hubbard, L.E., Hunt, R.J., Ip, H.S., Katz, R.A., Laurent, K.W., Miller, M.P., Munn, M.D., Ramey, A.M., Richards, K.D., Russell, R.E., Stokdyk, J.P., Takekawa, J.Y., and Walsh, D.P., 2016, U.S. Geological Survey science strategy for highly pathogenic avian influenza in wildlife and the environment (2016–2020): U.S. Geological Survey Open-File Report 2016–1121, 38 p., http://dx.doi.org/10.3133/ofr20161121.
Year Published: 2016
Experimental challenge of a peridomestic avian species, European Starlings (Sturnus vulgaris), with novel Influenza A H7N9 virus from China
In 2013 a novel avian influenza H7N9 virus was isolated from several critically ill patients in China, and infection with this virus has since caused more than 200 human deaths. Live poultry markets are the likely locations of virus exposure to humans. Peridomestic avian species also may play important roles in the transmission and maintenance of...
Hall, Jeffrey S.; Ip, Hon S.; Teslaa, Joshua L.; Nashold, Sean W.; Dusek, RobertAttribution: National Wildlife Health Center
Year Published: 2016
Evidence for common ancestry among viruses isolated from wild birds in Beringia and highly pathogenic intercontinental reassortant H5N1 and H5N2 influenza A viruses
Highly pathogenic clade 2.3.4.4 H5N8, H5N2, and H5N1 influenza A viruses were first detected in wild, captive, and domestic birds in North America in November–December 2014. In this study, we used wild waterbird samples collected in Alaska prior to the initial detection of clade 2.3.4.4 H5 influenza A viruses in North America to assess the...
Ramey, Andrew M.; Reeves, Andrew B.; Teslaa, Joshua L.; Nashold, Sean W.; Donnelly, Tyrone F.; Bahl, Justin; Hall, Jeffrey S.Attribution: Alaska Science Center, National Wildlife Health Center
Year Published: 2016
Limited evidence of intercontinental dispersal of avian paramyxovirus serotype 4 by migratory birds
Avian paramyxovirus serotype 4 (APMV-4) is a single stranded RNA virus that has most often been isolated from waterfowl. Limited information has been reported regarding the prevalence, pathogenicity, and genetic diversity of AMPV-4. To assess the intercontinental dispersal of this viral agent, we sequenced the fusion gene of 58 APMV-4 isolates...
Reeves, Andrew B.; Poulson, Rebecca L.; Muzyka, Denys; Ogawa, Haruko; Imai, Kunitoshi; Nghia Bui, Vuong; Hall, Jeffrey S.; Pantin-Jackwood, Mary; Stallknecht, David E.; Ramey, Andrew M.Attribution: National Wildlife Health Center, Alaska Science Center
View Citation
Reeves, A. B., R. L. Poulson, D. Muzyka, H. Ogawa, K. Imai, V. N. Bui, J. Hall, M. Pantin-Jackwood, D. Stallknecht, A. M. Ramey (2016) Limited evidence of intercontinental dispersal of avian paramyxovirus serotype 4 by migratory birds. Infection, Genetics, and Evolution. 40, 104-108. doi:10.1016/j.meegid.2016.02.031
Pre-USGS Publications
Paul Oesterle, Nicole Nemeth, Ginger Young, Nicole Mooers, Stacey Elmore, Richard Bowen, Paul Doherty, Jeffrey Hall, Robert McLean and Larry Clark. (2010) Cliff swallows, swallow bugs, and West Nile virus: an unlikely transmission mechanism. Vec. Borne Zoon. Dis. 10(5): 507-513.
Oesterle P, Nemeth N, VanDalen K, Sullivan H, Bentler K, Young G, McLean R, Clark L, Smeraski C and Hall JS. (2009) Experimental infection of cliff swallows (Petrochelidon pyrrhonota) with varying doses of West Nile virus. Am. J. Trop. Med. Hyg. 81:1159-1164.
10.4269/ajtmh.2009.09-0136
Jeffrey S. Hall, Kevin Bentler, Gabrielle Landolt, Richard B. Minnis, Tyler A. Campbell, Scott C. Barras, J. Jeffrey Root, Stacy Elmore, John Pilon, Kristy Pabilonia, Cindy Driscoll, Dennis Slate, Heather Sullivan and Robert G. McLean. (2008) Influenza infection in wild raccoons. Emerg. Inf. Dis. 14:1842-1848.
https://doi.org/10.3201/eid1412.071371
Jeffrey S. Hall, Rich Minnis, Tyler A. Campbell, Scott Barras, Randy W. DeYoung, Kristy Pabilonia, Michael Avery, Heather Sullivan, Larry Clark and Robert G. McLean. (2008) Influenza exposure in United States feral swine populations. J. Wildlife Dis. 44:362-368.
https://doi.org/10.7589/0090-3558-44.2.362
Britch, SC, Linthicum KJ, and Rift Valley Fever Working Group. (2007) Developing a research agenda and a comprehensive national prevention and response plan for Rift Valley fever in the United States. Emerg. Inf. Dis. [serial on the Internet] Available from http://www.cdc.gov/EID/content/13/8/e1.htm.
McLean, R.G., J.S. Hall, A.B. Franklin, H. Sullivan, K. VanDalen, S. Shriner, M. Farnsworth, P. Oesterle, G. Young, J. Carlson, K. Cobble, T. Deliberto, S. Swafford, S. Elmore, T. Anderson, S. Hauser, K. Bentler, N. Mooers and K. Huyvaert . (2007) Avian influenza in wild birds: environmental sampling strategy for the rapid detection of avian influenza viruses. Proceedings of the 12th Wildlife Damage Management Conference, Corpus Christi, TX.
Root, J., P. Oesterle, H. Sullivan, J.S. Hall, N. Marlenee, R.G. McLean, J.A. Montenieri and L. Clark. Fox squirrel (Sciuris niger) associations with West Nile virus. (2007) Am. J. Trop. Med. Hyg. 76:782-784.
Bentler, K., J.S. Hall, J. Root, K. Klenk, B. Schmitt and L. Clark. (2007) West Nile Virus seroprevalence in North American mesopredators. Am. J. Trop. Med. Hyg. 76:173-179.
Root, J.Jeffrey, P. Oesterle, N. Nemeth, K. Klenk, D.H. Gould, R.G. McLean, L. Clark and J.S. Hall. (2006) Experimental infection of fox squirrels (Sciurus niger) with West Nile virus. Am. J. Trop. Med. Hyg. 75:697-701.
Clark, L., J.S. Hall, R. McLean, M. Dunbar, K. Klenk, Richard Bowen and C.A. Smeraski. (2006) Susceptibility of greater sage-grouse to experimental infection with West Nile virus. J. Wildlife Dis. 42:14-22.
L. Clark and J. S. Hall. (2006) Avian influenza in wild birds: status as reservoirs and risks posed to humans and agriculture. Ornithological Monographs 60:3-29.
Santaella-Tenorio, J., R. McLean, J.S. Gill, R. Bowen, J. S. Hall and L. Clark. (2005) West Nile virus serosurveillance in Iowa white-tailed deer (1999-2003). Am. J. Trop. Med. Hyg. 73: 1038-1042).
Root, J.J., Hall J.S., McLean, R.G., Marlenee, N.L., Beaty, B.J., Gansowski, J. and Clark, L. (2005) Serologic evidence of exposure of wild mammals to Flaviviruses in the central and eastern United States. Am. J. Trop. Med. Hyg. 72: 622-630.
Hall J.S., French R., Morris T.J. and Stenger D.C. (2001) Structure and temporal dynamics of populations within wheat streak mosaic virus isolates. J. Virol. 75: 10231-10243.
Hall J.S., French R., Hein G.L., Morris T.J. and Stenger D.C. (2001) Three distinct mechanisms facilitate genetic isolation of sympatric wheat streak mosaic virus lineages. Virology 282: 230-236.
Choi I.-R., Hall J.S., Henry M., Zhang L., Hein G.L., French R. and Stenger D.C. (2000) Contributions of genetic drift and negative selection on the evolution of three strains of wheat streak mosaic tritimovirus. Arch. Virol. 146: 619-628.
Hall J.S., Adams B., Parsons T.J., French R., Lane L.C. and Jensen S.G. (1998) Molecular cloning, sequencing, and phylogenetic relationships of a new Potyvirus: sugarcane streak mosaic virus, and a reevaluation of the classification of the Potyviridae. Mol. Phylo. Evol. 10: 323-332.
Stenger D.C., Hall J.S., Choi I.-R. and French R. (1998) Phylogenetic relationships within the family Potyviridae: Wheat streak mosaic virus and brome streak mosaic virus are not members of the genus Rymovirus. Phytopathology 88: 782-787.
Characteristics of the High Plains Virus (HPV) and breeding for resistance in maize
Marcon, A., Kaeppler, S.M. Jensen, S.G. and Hall, J.S. 1996. Characteristics of the High Plains Virus (HPV) and breeding for resistance in maize. Proceedings of the Latin American Workshop on Maize Diseases. Sete Lagoas, MG, Brazil May 20-24, 1996. Publisher EMBRAPA, E. de Oliveira Editor.
Characterization of a Krish-sorghum infecting potyvirus
S.G. Jensen and J.S. Hall. (1993) Characterization of a Krish-sorghum infecting potyvirus. Sorghum Newsletter 34:17
F.L. Smith, S.W. Carper, J.S. Hall, B.J. Gilligan, E.L. Madsen and F.K. Storm. (1992) Cellular effects of piezoelectric versus electrohydraulic high energy shock waves. J. Urology 147:491-495.
Thermal protection by prostaglandin E1, a preclinical study
S.W. Carper, J.S. Hall and F.K. Storm. (1992) Thermal protection by prostaglandin E1, a preclinical study. Reg. Cancer Treatment 4:156-158.