Sarah A Sonsthagen, PhD
Assistant Unit Leader - Nebraska Cooperative Fish and Wildlife Research Unit
Dr. Sonsthagen joined the Nebraska Cooperative Fish & Wildlife Research Unit in 2020 from the U.S. Geological Survey Alaska Science Center where she studied the evolutionary relationships among Arctic vertebrate populations. Dr. Sonsthagen was a post-doctoral fellow at the Smithsonian Institution, National Museum of Natural History and National Zoo, awarded her Ph.D. in Biological Sciences from University of Alaska Fairbanks, M.S. in Zoology from Brigham Young University, and B.S. in Biology from University of Wisconsin-Stevens Point. Her research focuses on investigating ecological drivers of connectivity and adaptive capacity of species of conservation concern using both field- and laboratory-based methods. Movement underlies many key processes in ecology and evolution and is critical for species response to environmental change, as such, she applies population and community driven approaches to evaluate genomic and demographic connectivity across the landscape, adaptive capacity, and the influence of species biology in shaping spatial and temporal genomic diversity to inform management decisions. Dr. Sonsthagen has taught Population genetics, Application of genomics in conservation, and Ornithology.
Professional Experience
2013 - 2021 Research Geneticist, USGS Alaska Science Center
2015 - Present Research Associate, University of Wisconsin Stevens Point
2014 - Present Affiliate Faculty, Utah State University
2009 - Present Affiliate Faculty, University of Alaska Anchorage
2009 - 2013 Geneticist, USGS Alaska Science Center
Education and Certifications
Ph.D. 2006 University of Alaska Fairbanks, Fairbanks, AK
M.S. 2002 Brigham Young University, Provo, UT
B.S. 2000 University of Wisconsin Stevens Point, Stevens Point, WI
Affiliations and Memberships*
Sea Duck Joint Venture Continental Technical Team Member
Wilson Ornithological Society Research Grants Review Committee Member
Science and Products
Dispersal of H9N2 influenza A viruses between East Asia and North America by wild birds
Phylogenetics, phylogeography and population genetics of North American sea ducks (tribe: Mergini)
Spatial genetic structure of bristle-thighed curlews (Numenius tahitiensis): Breeding area differentiation not reflected on the non-breeding grounds
Implications of the circumpolar genetic structure of polar bears for their conservation in a rapidly warming Arctic
Development and characterization of microsatellite markers for the Hawaiian coot, Fulica alai, and Hawaiian gallinule, Gallinula galeata sandvicensis, through next-generation sequencing
Spatial variation and low diversity in the major histocompatibility complex in walrus (Odobenus rosmarus)
Interspecific hybridization contributes to high genetic diversity and apparent effective population size in an endemic population of mottled ducks (Anas fulvigula maculosa)
Sex determination of duck embryos: observations on syrinx development
Development and characterization of 21 polymorphic microsatellite markers for the barren-ground shrew, Sorex ugyunak (Mammalia: Sorcidae), through next-generation sequencing, and cross-species amplification in the masked shrew, S. cinereus
Genetic relationships among some subspecies of the Peregrine Falcon (Falco peregrinus L.), inferred from mitochondrial DNA control-region sequences
Phylogeography, post-glacial gene flow, and population history of North American goshawks (Accipeter gentilis)
Genetic structure of the Common Eider in the western Aleutian Islands prior to fox eradication
Non-USGS Publications**
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Science and Products
- Data
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- Publications
Filter Total Items: 61
Dispersal of H9N2 influenza A viruses between East Asia and North America by wild birds
Samples were collected from wild birds in western Alaska to assess dispersal of influenza A viruses between East Asia and North America. Two isolates shared nearly identical nucleotide identity at eight genomic segments with H9N2 viruses isolated from China and South Korea providing evidence for intercontinental dispersal by migratory birds.AuthorsAndrew M. Ramey, Andrew B. Reeves, Sarah A. Sonsthagen, Joshua L. Teslaa, Sean W. Nashold, Tyrone F. Donnelly, Bruce Casler, Jeffrey S. HallPhylogenetics, phylogeography and population genetics of North American sea ducks (tribe: Mergini)
Many environments occupied by North American sea ducks are remote and difficult to access, and as a result, detailed information about life history characteristics that drive population dynamics within and across species is limited. Nevertheless, progress on this front during the past several decades has benefited by the application of genetic technologies, and for several species, these technologAuthorsSandra L. Talbot, Sarah A. Sonsthagen, John M. Pearce, Kim T. ScribnerSpatial genetic structure of bristle-thighed curlews (Numenius tahitiensis): Breeding area differentiation not reflected on the non-breeding grounds
Migratory birds occupy geographically and ecologically disparate areas during their annual cycle with conditions on breeding and non-breeding grounds playing separate and important roles in population dynamics. We used data from nuclear microsatellite and mitochondrial DNA control region loci to assess the breeding and non-breeding spatial genetic structure of a transoceanic migrant shorebird, theAuthorsSarah A. Sonsthagen, T. Lee Tibbitts, Robert E. Gill, Ian S. Williams, Sandra L. TalbotImplications of the circumpolar genetic structure of polar bears for their conservation in a rapidly warming Arctic
We provide an expansive analysis of polar bear (Ursus maritimus) circumpolar genetic variation during the last two decades of decline in their sea-ice habitat. We sought to evaluate whether their genetic diversity and structure have changed over this period of habitat decline, how their current genetic patterns compare with past patterns, and how genetic demography changed with ancient fluctuationAuthorsElizabeth L. Peacock, Sarah A. Sonsthagen, Martyn E. Obbard, Andrei N. Boltunov, Eric V. Regehr, Nikita Ovsyanikov, Jon Aars, Stephen N. Atkinson, George K. Sage, Andrew G. Hope, Eve Zeyl, Lutz Bachmann, Dorothee Ehrich, Kim T. Scribner, Steven C. Amstrup, Stanislav Belikov, Erik W. Born, Andrew E. Derocher, Ian Stirling, Mitchell K. Taylor, Øystein Wiig, David Paetkau, Sandra L. TalbotDevelopment and characterization of microsatellite markers for the Hawaiian coot, Fulica alai, and Hawaiian gallinule, Gallinula galeata sandvicensis, through next-generation sequencing
We used next generation shotgun sequencing to develop novel microsatellite markers for two endangered waterbirds; the Hawaiian coot (Fulica alai) and Hawaiian gallinule (Gallinula galeata sandvicensis). The 20 loci polymorphic in the Hawaiian coot displayed moderate allelic diversity (average 3.8 alleles/locus) and heterozygosity (average 59.5 %). The 12 loci variable for the Hawaiian gallinule exAuthorsSarah A. Sonsthagen, Robert E. Wilson, Jared G. UnderwoodSpatial variation and low diversity in the major histocompatibility complex in walrus (Odobenus rosmarus)
Increased global temperature and associated changes to Arctic habitats will likely result in the northward advance of species, including an influx of pathogens novel to the Arctic. How species respond to these immunological challenges will depend in part on the adaptive potential of their immune response system. We compared levels of genetic diversity at a gene associated with adaptive immune respAuthorsSarah A. Sonsthagen, Krystal R. Fales, Chadwick V. Jay, George K. Sage, Sandra L. TalbotInterspecific hybridization contributes to high genetic diversity and apparent effective population size in an endemic population of mottled ducks (Anas fulvigula maculosa)
Under drift-mutation equilibrium, genetic diversity is expected to be correlated with effective population size (Ne). Changes in population size and gene flow are two important processes that can cause populations to deviate from this expected relationship. In this study, we used DNA sequences from six independent loci to examine the influence of these processes on standing genetic diversity in enAuthorsJeffrey L. Peters, Sarah A. Sonsthagen, Philip Lavretsky, Michael Rezsutek, William P. Johnson, Kevin G. McCrackenSex determination of duck embryos: observations on syrinx development
Ducks exhibit sexual dimorphism in vocal anatomy. Asymmetrical ossification of the syrinx (bulla syringealis) is discernable at about 10 days of age in male Pekin duck (Anas platyrhynchos domestica) embryos, but information is lacking on the early development of the bulla in wild ducks. To evaluate the reliability of this characteristic for sexing developing embryos, we examined the syrinx of deadAuthorsRobert E. Wilson, Sarah A. Sonsthagen, J. Christian FransonDevelopment and characterization of 21 polymorphic microsatellite markers for the barren-ground shrew, Sorex ugyunak (Mammalia: Sorcidae), through next-generation sequencing, and cross-species amplification in the masked shrew, S. cinereus
We used next generation shotgun sequencing to develop 21 novel microsatellite markers for the barren-ground shrew (Sorex ugyunak), which were polymorphic among individuals from northern Alaska. The loci displayed moderate allelic diversity (averaging 6.81 alleles per locus) and heterozygosity (averaging 70 %). Two loci deviated from Hardy–Weinberg equilibrium (HWE) due to heterozygote deficiency.AuthorsSarah A. Sonsthagen, G. Kevin Sage, Megan C. Fowler, Andrew G. Hope, J.A. Cook, Sandra L. TalbotGenetic relationships among some subspecies of the Peregrine Falcon (Falco peregrinus L.), inferred from mitochondrial DNA control-region sequences
The ability to successfully colonize and persist in diverse environments likely requires broad morphological and behavioral plasticity and adaptability, and this may partly explain why the Peregrine Falcon (Falco peregrinus) exhibits a large range of morphological characteristics across their global distribution. Regional and local differences within Peregrine Falcons were sufficiently variable thAuthorsClayton M. White, Sarah A. Sonsthagen, George K. Sage, Clifford Anderson, Sandra L. TalbotPhylogeography, post-glacial gene flow, and population history of North American goshawks (Accipeter gentilis)
Climate cycling during the Quaternary played a critical role in the diversification of avian lineages in North America, greatly influencing the genetic characteristics of contemporary populations. To test the hypothesis that North American Northern Goshawks (Accipitergentilis) were historically isolated within multiple Late Pleistocene refugia, we assessed diversity and population genetic structurAuthorsShelley Bayard De Volo, Richard T. Reynolds, Sarah A. Sonsthagen, Sandra L. Talbot, Michael F. AntolinGenetic structure of the Common Eider in the western Aleutian Islands prior to fox eradication
Since the late 18th century bird populations residing in the Aleutian Archipelago have been greatly reduced by introduced arctic foxes (Alopex lagopus). We analyzed data from microsatellite, nuclear intron, and mitochondrial (mtDNA) loci to examine the spatial genetic structure, demography, and gene flow among four Aleutian Island populations of the Common Eider (Somateria mollissima) much reducedAuthorsSarah A. Sonsthagen, Sandra L. Talbot, Robert E. Wilson, Margaret R. Petersen, Jeffrey C. Williams, G. Vernon Byrd, Kevin G. McCrackenNon-USGS Publications**
Pons, J.-M., S.A. Sonsthagen, C. Dove, P.A. Crochet. 2014. Extensive mitochondrial introgression in North American Great Black-backed Gulls (Larus marinus) from the American Herring Gull (Larus smithsonianus) with little nuclear DNA impact. Heredity. 112:226–239. doi:10.1038/hdy.2013.98Wilson, R.E., M.D. Eaton, S.A. Sonsthagen, J.L. Peters, K.P. Johnson, B. Simarra, and K.G. McCracken. 2011. Speciation and subspecies divergence in Cinnamon Teal and Blue-winged Teal. Condor. 13:747–761.Cibois, A., J.S. Beadell, G.R. Graves, E. Pasquet, B. Slika, S.A. Sonsthagen, J.-C. Thibault, and R.C. Fleischer. 2011. Charting the course of reed-warblers across the Pacific islands. Journal of Biogeography. 38:1963–1975.Driskell, A.C., J.A. Norman, S. Pruett-Jones, E. Mangall, S.A. Sonsthagen, L. Christidis. 2011. A multigene phylogeny examining evolutionary and ecological relationships in the Australo-Papuan wrens of the subfamily Malurinae (Aves). Molecular Phylogenetics and Evolution. 60:480–485.McCracken, K.G., C.P. Barger, M. Bulgarella, K.P. Johnson, S.A. Sonsthagen, T.H. Valqui, R.E. Wilson, K. Winker, and M.D. Sorenson. 2009. Parallel adaptation to high-altitude hypoxia in the major hemoglobin of eight Andean duck species. Molecular Ecology. 18:3992–4005.Cooper, S.J., and S. Sonsthagen. 2007. Heat production from foraging activity contributes to thermoregulation in Black-capped Chickadees. Condor. 109:446–451.Wilson, R.E., S.A. Sonsthagen, C.P. Barger, and K.G. McCracken. 2007. Asymmetric molt or feather wear in Flying Steamer Ducks (Tachyeres patachonicus) from coastal habitats in Argentina. Ornitologia Neotropical. 18:293–300.Sonsthagen, S.A., R. Rodriguez, and C.M. White. 2006. Satellite telemetry of Northern Goshawks breeding in Utah–I. Annual movements. Studies in Avian Biology. 31:239–251.Sonsthagen, S.A., R. Rodriguez, and C.M. White. 2006. Satellite telemetry of Northern Goshawks breeding in Utah–II. Annual habitats. Studies in Avian Biology. 31:252–259.Gustavson, K.E., S.A. Sonsthagen, R. Crunkilton, and J.M. Harkin. 2000. Groundwater toxicity assessment using bioassay, chemical, and TIE analyses. Environmental Toxicology. 15:421–430.Rosenfield, R.N., J. Bielefeldt, S. Sonsthagen, and T. Booms. 2000. Comparable reproductive success at conifer plantation and non-plantation nest sites for Cooper’s Hawks in Wisconsin. Wilson Bulletin. 112:417–421.**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
*Disclaimer: Listing outside positions with professional scientific organizations on this Staff Profile are for informational purposes only and do not constitute an endorsement of those professional scientific organizations or their activities by the USGS, Department of the Interior, or U.S. Government