Wesley Daniel, Ph.D.
Wesley Daniel is a Fishery Biologist at the USGS Wetland and Aquatic Research Center, and leads the USGS Nonindigenous Aquatic Species Database.
Science and Products
Filter Total Items: 17
Climate matching with the climatchR R package
Climate matching is a method for understanding species distributions and ranges and may be used as part of horizon scanning. Horizon scanning is the process of examining potential risk of invasion of new invasive species. Preventing new invasive species invasion requires less time and resources than attempting to control and remove established invasive species. Horizon scanning allows resource...
AquaDePTH-Aquatic Disease and Pathogen Repository
The Aquatic Disease and Pathogen Repository (AquaDePTH) will be a public-facing national repository to support biosurveillance of aquatic animal diseases and pathogens. By collating historically published data, plus new aquatic pathogen and disease information, stakeholders will be able monitor fish kill and aquatic pathogen trends spatially and temporally in freshwater and marine environments...
Chesapeake Bay Aquatic Habitat Assessments
Eastern Ecological Science Center research ecologists are working with state and local partners to develop multiple biological assessments of non-tidal stream and river conditions in the Chesapeake Bay watershed.
Future Aquatic Invaders of the Northeast U.S.: How Climate Change, Human Vectors, and Natural History Could Bring Southern and Western Species North
There are significant investments by states and resource agencies in the northeast U.S. for invasive aquatic species monitoring and management. These investments in jurisdictional waters help maintain their use for drinking, industry, and recreation. It is essential to understand the risks from invasive species, because once established, species can be costly to society and difficult or impossible
Southeast Regional Invasive Species and Climate Change Management Network (SE RISCC)
Climate change is expected to worsen the harmful effects of invasive species on native wildlife. This presents a growing conservation challenge for invasive species managers in the southeastern United States where thousands of invasive species exist. While many of these invasive species currently have relatively small ranges in the southeastern U.S., climate change may allow them to expand into ne
Implementing FAIR practices: Storing and displaying eDNA data in the USGS Nonindigenous Aquatic Species database
We are working to incorporate environmental DNA (eDNA) data into the Nonindigenous Aquatic Species (NAS) database, which houses over 570,000 records of nonindigenous species nationally, and already is used by a broad user-base of managers and researchers regularly for invasive species monitoring. eDNA studies have allowed for the identification and biosurveillance of numerous invasive and threaten
An Assessment of Invasive Species Range Shifts in the Southeastern U.S. and Actions to Manage Them
Species are on the move as they respond to climate change. This includes many native species, but also species with high costs to society such as disease vectors, pests, and nonnative invasive species (an invasive species is a species that is not native to a specific location but is spreading with the tendency of causing damage to native plants and animals). Currently there are hundreds of invasiv
Establishing standards and integrating environmental DNA (eDNA) data into the USGS Nonindigenous Aquatic Species database
Environmental DNA (eDNA) testing allows for high sensitivity monitoring efforts of cryptic species in large, remote systems and is performed by investigating water and soil samples for sloughed DNA. Having access to eDNA datasets across multiple taxa and ecosystems is necessary for improved coordination among researchers and management. Additionally, quality control protocols are needed to vet inc
National Public Screening Tool for Invasive and Non-native Aquatic Species Data
Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these nonindigenous occurren
The Nonindigenous Aquatic Species Alert Risk Mapper (ARM)
The Nonindigenous Aquatic Species (NAS) program has developed a new tool, the NAS Alert Risk Mapper (ARM), to characterize waterbodies in the conterminous U.S. and Hawaii at potential risk of invasion from a new nonindigenous species sighting.
Defining Native Ranges of U.S. Inland Fishes
Understanding the native versus non-native range of a species can provide useful information about dispersal, population distribution patterns, and human mediated movement across hydrologic barriers. The USGS Nonindigenous Aquatic Species (NAS) Program is working with partners to define native ranges of inland fishes in the United States to help identify which species should be included in the NAS...
The Nonindigenous Aquatic Species Flood and Storm Tracker (FaST)
Storm-related flooding can lead to the potential spread of nonindigenous (or non-native) aquatic species into waterways they have not been seen in before. The USGS Nonindigenous Aquatic Species program has developed an innovative mapping tool to help natural resource managers with post-storm nonindigenous aquatic species detection and assessment efforts.
Filter Total Items: 19
Assessing risk communication in the pet and aquarium trade
This product summarizes data for the web engine search analysis and the outreach materials analysis from our report entitled, Assessing Risk Communication in the Pet and Aquarium Trade: An Analysis of Outreach and Engagement Efforts. The web engine search data include internet search results from Google and Bing. Materials analysis data include a matrix of questions that were used to determine mes
Boat ramp locations in the United States of America
The dataset provides point locations of many boat ramp locations in the United States accessible to the public.
The North American Freshwater Migratory Fish Database (NAFMFD): Characterizing the migratory life histories of freshwater fishes of Canada, the United States, and Mexico
We developed the North American Freshwater Migratory Fish Database (NAFMFD) that synthesizes current knowledge of migratory status, pattern, and behavior for native and non-native freshwater fish species throughout North America, including 1,241 species representing 79 families and 322 genera.
Native ranges of freshwater fishes of North America
Background: The Nonindigenous Aquatic Species (NAS) Database functions as a repository and clearinghouse for the occurrence of nonindigenous aquatic species information from across the United States. The Database contains locality information on more than 1,300 species introduced as early as 1800, including freshwater vertebrates and invertebrates, aquatic plants, and marine fishes. Taxa include b
Waterfalls and Rapids in the Conterminous United States Linked to the National Hydrography Datasets V2.0
This GeoJSON dataset contains information about 10780 waterfall and 1080 rapid locations (referred to as falls throughout the metadata) and characteristics (e.g. type and height) for the conterminous United States. This dataset centralizes known information about falls while providing basic quality control (i.e. resolving duplicate records and spatial accuracy checks) and linkages to stream networ
Locations of mines and mining activity in the contiguous United States 2013
This dataset includes locations and associated information about mines and mining activity in the contiguous United States. The database was developed by combining publicly available national datasets of mineral mines, uranium mines, and minor and major coal mine activities. This database was developed in 2013, but temporal range of mine data varied dependent on source. Uranium mine information ca
National Fish Habitat Partnership (NFHP) 2015 Anthropogenic Disturbance Data for Southeast Alaska linked to the modified NHD with catchments
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments of Southeast Alaska. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) b
Nonindigenous aquatic species and potential spread after Hurricane Harvey-revised map
This refined map was created to help assess possible spread of nonindigenous aquatic species distributions due to flooding associated with Hurricane Harvey. Storm surge and flood events can assist expansion and dissemination of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwat
FishTail, Indices and Supporting Data Characterizing the Current and Future Risk to Fish Habitat Degradation in the Northeast Climate Science Center Region
Human impacts occurring throughout the Northeast and Midwest United States, including urbanization, agriculture, and dams, have multiple effects on the regions streams which support economically valuable stream fishes. Changes in climate are expected to lead to additional impacts in stream habitats and fish assemblages in multiple ways, including changing stream water temperatures. To manage str
Nonindigenous aquatic species and potential spread after Hurricane Nate
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Nate. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater bridges along co
Nonindigenous aquatic species and potential spread after Hurricane Irma
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Irma. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater bridges along co
Nonindigenous aquatic species and potential spread after Hurricane Maria
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Maria. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater bridges along c
Filter Total Items: 25
Identifying invasive species threats, pathways, and impacts to improve biosecurity
Managing invasive species with prevention and early-detection strategies can avert severe ecological and economic impacts. Horizon scanning, an evidence-based process combining risk screening and consensus building to identify threats, has become a valuable tool for prioritizing invasive species management and prevention. We assembled a working group of experts from academic, government, and nonpr
Authors
Deah Lieurance, Susan Canavan, Donald C. Behringer, Amy E. Kendig, Carey R. Minteer, Lindsey S. Reisinger, Christina M. Romagosa, S. Luke Flory, Julie L. Lockwood, Patti J. Anderson, Shirley M. Baker, Jamie Bojko, Kristen E. Bowers, Kim Canavan, Kelly Carruthers, Wesley Daniel, Doria R. Gordon, Jeffrey E. Hill, Jennifer G. Howeth, Basil V. Iannone, Lucas Jennings, Lyn A. Gettys, Eutychus M. Kariuki, John M. Kunzer, H. Dail Laughinghouse, Nicholas E. Mandrak, Sara McCann, Tolulope Morawo, Cayla Morningstar, Matthew Neilson, Tabitha Petri, Ian Pfingsten, Robert Reed, Linda J. Walters, Christian Wanamaker
America's most wanted fishes: Cataloging risk assessments to prioritize invasive species for management action
Hundreds of fish species enter the United States through human intervention (e.g., importation) and some of these fishes pose a substantial risk to the nation’s assets and ecosystems. Prevention, early detection, and rapid response (EDRR) are vital to stop species invasions, but time and resources to manage the large suite of fish species that enter the nation are limited. Evaluating the risk of a
Authors
Emily M. Dean, Audrey Jordon, Aimee Christine Agnew, Nicole D Hernandez, Cayla Morningstar, Matthew Neilson, Sara Elizabeth Piccolomini, Brian Reichert, Amy Kristine Wray, Wesley Daniel
Horizon scanning for potentially invasive non-native marine species to inform trans-boundary conservation management – Example of the northern Gulf of Mexico
Prevention of non-native species introductions and establishment is essential to avoid adverse impacts of invasive species in marine environments. To identify potential new invasive species and inform non-native species management options for the northern Gulf of Mexico (Alabama, Mississippi, Louisiana, Texas), 138 marine species were risk screened for current and future climate conditions using t
Authors
Kathryn A. O'Shaughnessy, Lorenzo Vilizzi, Wesley Daniel, Monica E. McGarrity, Hanna Bauer, Leslie Hartman, Stephen Geiger, Paul Sammarco, Steve Kolian, Scott Porter, Jessica Dutton, Matthew R. McClure, Michael Norberg, Alex Fogg, Timothy J. Lyons, Justin Procopio, Lauren Bantista, Wayne A Bennett, Mary Wicksten, David B. Reeves, Julie Lively, Elizabeth M. Robinson, Jorge Brenner, Joseph Goy, Ashley Morgan-Olvera, Anna L.E. Yunnie, Gordon H. Copp
Cross-continental evaluation of landscape-scale drivers and their impacts to fluvial fishes: Understanding frequency and severity to improve fish conservation in Europe and the United States
Fluvial fishes are threatened globally from intensive human landscape stressors degrading aquatic ecosystems. However, impacts vary regionally, as stressors and natural environmental factors differ between ecoregions and continents. To date, a comparison of fish responses to landscape stressors over continents is lacking, limiting understanding of consistency of impacts and hampering efficiencies
Authors
Maria M. Üblacker, Dana M. Infante, Arthur R. Cooper, Wesley Daniel, Stefan Schmutz, Rafaela Schinegger
BioLake: A first assessment of lake temperature-derived bioclimatic predictors for aquatic invasive species
Aquatic invasive species (AIS) present major ecological and economic challenges globally, endangering ecosystems and human livelihoods. Managers and policy makers thus need tools to predict invasion risk and prioritize species and areas of concern, and they often use native range climate matching to determine whether a species could persist in a new location. However, climate matching for AIS ofte
Authors
Ryan C. Burner, Wesley Daniel, Peder S. Engelstad, Christopher J. Churchill, Richard A. Erickson
Assessing impacts of human stressors on stream fish habitats across the Mississippi River basin
Effective conservation of stream fishes and their habitats is complicated by the fact that human stressors alter the way in which natural factors such as stream size, catchment geology, and regional climate influence stream ecosystems. Consequently, efforts to assess the condition of stream fishes and their habitats must not only attempt to characterize the effects of human stressors but must acco
Authors
Jared Ross, Dana M. Infante, Arthur R. Cooper, Joanna B. Whittier, Wesley Daniel
When are environmental DNA early detections of invasive species actionable?
Environmental DNA (eDNA) sampling provides sensitive early detection capabilities for recently introduced taxa. However, natural resource managers struggle with how to integrate eDNA results into an early detection rapid response program because positive eDNA detections are not always indicative of an eventual infestation. We used a structured decision making (SDM) framework to evaluate appropriat
Authors
Adam J. Sepulveda, Christine E. Dumoulin, Denise L. Blanchette, John Mcphedran, Colin Holme, Nathan Whalen, Margaret Hunter, Christopher M. Merkes, Catherine A. Richter, Matthew Neilson, Wesley Daniel, Devin Nicole Jones, David R. Smith
Plant migration due to winter climate change: Range expansion of tropical invasive plants in response to warming winters
Warming winters due to climate change can facilitate the range expansion of invasive non-native species. In the southeastern United States, the frequency and intensity of extreme winter temperatures determines the northern range limits of many tropical organisms including many species of invasive non-native plants. However, the effects of winter climate change on invasive species’ range limits hav
Authors
Michael Osland, Bogdan Chivoiu, Laura Feher, Leah Dale, Deah Lieurance, Wesley Daniel, Jessica E. Spencer
Community for data integration 2019 project report
The U.S. Geological Survey Community for Data Integration annually supports small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 14 projects supported in fiscal year 2019 and outlines their goals, activities, and accomplishments. Proposals in 2019 were encouraged to addre
Authors
Amanda N. Liford, Caitlin M. Andrews, Aparna Bamzai, Joseph A. Bard, David S. Blehert, John B. Bradford, Wesley M. Daniel, Sara L. Caldwell Eldridge, Frank Engel, Jason A. Ferrante, Amy K. Gilmer, Margaret E. Hunter, Jeanne M. Jones, Benjamin Letcher, Frances L. Lightsom, Richard R. McDonald, Leah E. Morgan, Sasha C. Reed, Leslie Hsu
By
Ecosystems Mission Area, Water Resources Mission Area, Science Synthesis, Analysis and Research Program, Science Analytics and Synthesis (SAS) Program, Volcano Hazards Program, Community for Data Integration (CDI), Geology, Geophysics, and Geochemistry Science Center, Geosciences and Environmental Change Science Center, National Wildlife Health Center, Oklahoma-Texas Water Science Center, Southwest Biological Science Center, Volcano Science Center, Western Geographic Science Center, Wetland and Aquatic Research Center , Woods Hole Coastal and Marine Science Center, Science Data Management
Gaining decision-maker confidence through community consensus: Developing environmental DNA standards for data display on the USGS Nonindigenous Aquatic Species database
To advance national efforts for the detection and biosurveillance of aquatic invasive species (AIS), we employed a community consensus process to enable the incorporation of environmental DNA (eDNA) detection data into the U.S. Geological Survey’s (USGS) Nonindigenous Aquatic Species (NAS) database (https://nas.er.usgs.gov/eDNA/). Our goal was to identify minimum standards and best practices for t
Authors
Jason Ferrante, Wesley Daniel, Jonathan (Contractor) Adam Freedman, Katy E. Klymus, Matthew Neilson, Yale Passamaneck, Christopher B. Rees, Adam J. Sepulveda, Margaret Hunter
Climate matching with the climatchR R package
Climate matching allows comparisons of climatic conditions between different locations to understand location and species range climatic suitability. The approach may be used as part of horizon scanning exercises such as those conducted for invasive species. We implemented the CLIMATCH algorithm into an R package, climatchR. The package allows automated and scripted climate matching exercises acro
Authors
Richard A. Erickson, Peder S Engelstad, Catherine S. Jarnevich, Helen Sofaer, Wesley Daniel
Using structured decision making to evaluate potential management responses to detection of dreissenid mussel (Dreissena spp.) environmental DNA
Environmental (e)DNA tools are sensitive and cost-effective for early detection of invasive species. However, the uncertainty associated with the interpretation of positive eDNA detections makes it challenging to determine appropriate natural resource management responses. Multiple sources of error can give rise to positive detections of eDNA in a sample when individuals of that species are not pr
Authors
Adam J. Sepulveda, David R. Smith, Katherine M O'Donnell, Nathan Owens, Brittany White, Catherine A. Richter, Christopher M. Merkes, Skylar Wolf, Mike Rau, Matthew Neilson, Wesley Daniel, Christine E. Dumoulin, Margaret Hunter
High-throughput calculations of climatch scores
Matching climate envelopes allows people to examine how potential invasive species may match habitats.
This repository contains code for using the climatchR package for high-throughput calculations of climatch scores for species using GBIF data.
Climatch is based upon the climatch algorithm as implemented through the climatchR package.
climatchR: An implementation of Climatch in R
Matching climate envelopes of allows people to examine how potential invasive species may match habitats. The Australian government created Climatch to do allow for these comparisons. However, this webpage does not allow for readily scripting climate matching. Hence, the authors created climatchR, an R package (R Core Team 2020) implementing the climatch method in R. This was created to allow auto
Science and Products
- Science
Filter Total Items: 17
Climate matching with the climatchR R package
Climate matching is a method for understanding species distributions and ranges and may be used as part of horizon scanning. Horizon scanning is the process of examining potential risk of invasion of new invasive species. Preventing new invasive species invasion requires less time and resources than attempting to control and remove established invasive species. Horizon scanning allows resource...AquaDePTH-Aquatic Disease and Pathogen Repository
The Aquatic Disease and Pathogen Repository (AquaDePTH) will be a public-facing national repository to support biosurveillance of aquatic animal diseases and pathogens. By collating historically published data, plus new aquatic pathogen and disease information, stakeholders will be able monitor fish kill and aquatic pathogen trends spatially and temporally in freshwater and marine environments...Chesapeake Bay Aquatic Habitat Assessments
Eastern Ecological Science Center research ecologists are working with state and local partners to develop multiple biological assessments of non-tidal stream and river conditions in the Chesapeake Bay watershed.Future Aquatic Invaders of the Northeast U.S.: How Climate Change, Human Vectors, and Natural History Could Bring Southern and Western Species North
There are significant investments by states and resource agencies in the northeast U.S. for invasive aquatic species monitoring and management. These investments in jurisdictional waters help maintain their use for drinking, industry, and recreation. It is essential to understand the risks from invasive species, because once established, species can be costly to society and difficult or impossibleSoutheast Regional Invasive Species and Climate Change Management Network (SE RISCC)
Climate change is expected to worsen the harmful effects of invasive species on native wildlife. This presents a growing conservation challenge for invasive species managers in the southeastern United States where thousands of invasive species exist. While many of these invasive species currently have relatively small ranges in the southeastern U.S., climate change may allow them to expand into neImplementing FAIR practices: Storing and displaying eDNA data in the USGS Nonindigenous Aquatic Species database
We are working to incorporate environmental DNA (eDNA) data into the Nonindigenous Aquatic Species (NAS) database, which houses over 570,000 records of nonindigenous species nationally, and already is used by a broad user-base of managers and researchers regularly for invasive species monitoring. eDNA studies have allowed for the identification and biosurveillance of numerous invasive and threatenAn Assessment of Invasive Species Range Shifts in the Southeastern U.S. and Actions to Manage Them
Species are on the move as they respond to climate change. This includes many native species, but also species with high costs to society such as disease vectors, pests, and nonnative invasive species (an invasive species is a species that is not native to a specific location but is spreading with the tendency of causing damage to native plants and animals). Currently there are hundreds of invasivEstablishing standards and integrating environmental DNA (eDNA) data into the USGS Nonindigenous Aquatic Species database
Environmental DNA (eDNA) testing allows for high sensitivity monitoring efforts of cryptic species in large, remote systems and is performed by investigating water and soil samples for sloughed DNA. Having access to eDNA datasets across multiple taxa and ecosystems is necessary for improved coordination among researchers and management. Additionally, quality control protocols are needed to vet incNational Public Screening Tool for Invasive and Non-native Aquatic Species Data
Identifying the leading edge of a biological invasion can be difficult. Many management and research entities have biological samples or surveys that may unknowingly contain data on nonindigenous species. The new Nonindigenous Aquatic Species (NAS) Database automated online tool “SEINeD” (Screen and Evaluate Invasive and Non-native Data) will allow a user to search for these nonindigenous occurrenThe Nonindigenous Aquatic Species Alert Risk Mapper (ARM)
The Nonindigenous Aquatic Species (NAS) program has developed a new tool, the NAS Alert Risk Mapper (ARM), to characterize waterbodies in the conterminous U.S. and Hawaii at potential risk of invasion from a new nonindigenous species sighting.Defining Native Ranges of U.S. Inland Fishes
Understanding the native versus non-native range of a species can provide useful information about dispersal, population distribution patterns, and human mediated movement across hydrologic barriers. The USGS Nonindigenous Aquatic Species (NAS) Program is working with partners to define native ranges of inland fishes in the United States to help identify which species should be included in the NAS...The Nonindigenous Aquatic Species Flood and Storm Tracker (FaST)
Storm-related flooding can lead to the potential spread of nonindigenous (or non-native) aquatic species into waterways they have not been seen in before. The USGS Nonindigenous Aquatic Species program has developed an innovative mapping tool to help natural resource managers with post-storm nonindigenous aquatic species detection and assessment efforts. - Data
Filter Total Items: 19
Assessing risk communication in the pet and aquarium trade
This product summarizes data for the web engine search analysis and the outreach materials analysis from our report entitled, Assessing Risk Communication in the Pet and Aquarium Trade: An Analysis of Outreach and Engagement Efforts. The web engine search data include internet search results from Google and Bing. Materials analysis data include a matrix of questions that were used to determine mesBoat ramp locations in the United States of America
The dataset provides point locations of many boat ramp locations in the United States accessible to the public.The North American Freshwater Migratory Fish Database (NAFMFD): Characterizing the migratory life histories of freshwater fishes of Canada, the United States, and Mexico
We developed the North American Freshwater Migratory Fish Database (NAFMFD) that synthesizes current knowledge of migratory status, pattern, and behavior for native and non-native freshwater fish species throughout North America, including 1,241 species representing 79 families and 322 genera.Native ranges of freshwater fishes of North America
Background: The Nonindigenous Aquatic Species (NAS) Database functions as a repository and clearinghouse for the occurrence of nonindigenous aquatic species information from across the United States. The Database contains locality information on more than 1,300 species introduced as early as 1800, including freshwater vertebrates and invertebrates, aquatic plants, and marine fishes. Taxa include bWaterfalls and Rapids in the Conterminous United States Linked to the National Hydrography Datasets V2.0
This GeoJSON dataset contains information about 10780 waterfall and 1080 rapid locations (referred to as falls throughout the metadata) and characteristics (e.g. type and height) for the conterminous United States. This dataset centralizes known information about falls while providing basic quality control (i.e. resolving duplicate records and spatial accuracy checks) and linkages to stream networLocations of mines and mining activity in the contiguous United States 2013
This dataset includes locations and associated information about mines and mining activity in the contiguous United States. The database was developed by combining publicly available national datasets of mineral mines, uranium mines, and minor and major coal mine activities. This database was developed in 2013, but temporal range of mine data varied dependent on source. Uranium mine information caNational Fish Habitat Partnership (NFHP) 2015 Anthropogenic Disturbance Data for Southeast Alaska linked to the modified NHD with catchments
This CSV file contains landscape factors representing anthropogenic disturbances to stream habitats summarized within local and network stream catchments of Southeast Alaska. The source datasets compiled and attributed to spatial units were identified as being: (1) meaningful for assessing fluvial fish habitat; (2) consistent across the entire study area in the way that they were assembled; (3) bNonindigenous aquatic species and potential spread after Hurricane Harvey-revised map
This refined map was created to help assess possible spread of nonindigenous aquatic species distributions due to flooding associated with Hurricane Harvey. Storm surge and flood events can assist expansion and dissemination of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwatFishTail, Indices and Supporting Data Characterizing the Current and Future Risk to Fish Habitat Degradation in the Northeast Climate Science Center Region
Human impacts occurring throughout the Northeast and Midwest United States, including urbanization, agriculture, and dams, have multiple effects on the regions streams which support economically valuable stream fishes. Changes in climate are expected to lead to additional impacts in stream habitats and fish assemblages in multiple ways, including changing stream water temperatures. To manage strNonindigenous aquatic species and potential spread after Hurricane Nate
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Nate. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater bridges along coNonindigenous aquatic species and potential spread after Hurricane Irma
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Irma. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater bridges along coNonindigenous aquatic species and potential spread after Hurricane Maria
This map was created to help assess impacts on nonindigenous aquatic species distributions due to flooding associated with Hurricane Maria. Storm surge and flood events can assist expansion and distribution of nonindigenous aquatic species through the connection of adjacent watersheds, backflow of water upstream of impoundments, increased downstream flow, and creation of freshwater bridges along c - Publications
Filter Total Items: 25
Identifying invasive species threats, pathways, and impacts to improve biosecurity
Managing invasive species with prevention and early-detection strategies can avert severe ecological and economic impacts. Horizon scanning, an evidence-based process combining risk screening and consensus building to identify threats, has become a valuable tool for prioritizing invasive species management and prevention. We assembled a working group of experts from academic, government, and nonprAuthorsDeah Lieurance, Susan Canavan, Donald C. Behringer, Amy E. Kendig, Carey R. Minteer, Lindsey S. Reisinger, Christina M. Romagosa, S. Luke Flory, Julie L. Lockwood, Patti J. Anderson, Shirley M. Baker, Jamie Bojko, Kristen E. Bowers, Kim Canavan, Kelly Carruthers, Wesley Daniel, Doria R. Gordon, Jeffrey E. Hill, Jennifer G. Howeth, Basil V. Iannone, Lucas Jennings, Lyn A. Gettys, Eutychus M. Kariuki, John M. Kunzer, H. Dail Laughinghouse, Nicholas E. Mandrak, Sara McCann, Tolulope Morawo, Cayla Morningstar, Matthew Neilson, Tabitha Petri, Ian Pfingsten, Robert Reed, Linda J. Walters, Christian WanamakerAmerica's most wanted fishes: Cataloging risk assessments to prioritize invasive species for management action
Hundreds of fish species enter the United States through human intervention (e.g., importation) and some of these fishes pose a substantial risk to the nation’s assets and ecosystems. Prevention, early detection, and rapid response (EDRR) are vital to stop species invasions, but time and resources to manage the large suite of fish species that enter the nation are limited. Evaluating the risk of aAuthorsEmily M. Dean, Audrey Jordon, Aimee Christine Agnew, Nicole D Hernandez, Cayla Morningstar, Matthew Neilson, Sara Elizabeth Piccolomini, Brian Reichert, Amy Kristine Wray, Wesley DanielHorizon scanning for potentially invasive non-native marine species to inform trans-boundary conservation management – Example of the northern Gulf of Mexico
Prevention of non-native species introductions and establishment is essential to avoid adverse impacts of invasive species in marine environments. To identify potential new invasive species and inform non-native species management options for the northern Gulf of Mexico (Alabama, Mississippi, Louisiana, Texas), 138 marine species were risk screened for current and future climate conditions using tAuthorsKathryn A. O'Shaughnessy, Lorenzo Vilizzi, Wesley Daniel, Monica E. McGarrity, Hanna Bauer, Leslie Hartman, Stephen Geiger, Paul Sammarco, Steve Kolian, Scott Porter, Jessica Dutton, Matthew R. McClure, Michael Norberg, Alex Fogg, Timothy J. Lyons, Justin Procopio, Lauren Bantista, Wayne A Bennett, Mary Wicksten, David B. Reeves, Julie Lively, Elizabeth M. Robinson, Jorge Brenner, Joseph Goy, Ashley Morgan-Olvera, Anna L.E. Yunnie, Gordon H. CoppCross-continental evaluation of landscape-scale drivers and their impacts to fluvial fishes: Understanding frequency and severity to improve fish conservation in Europe and the United States
Fluvial fishes are threatened globally from intensive human landscape stressors degrading aquatic ecosystems. However, impacts vary regionally, as stressors and natural environmental factors differ between ecoregions and continents. To date, a comparison of fish responses to landscape stressors over continents is lacking, limiting understanding of consistency of impacts and hampering efficienciesAuthorsMaria M. Üblacker, Dana M. Infante, Arthur R. Cooper, Wesley Daniel, Stefan Schmutz, Rafaela SchineggerBioLake: A first assessment of lake temperature-derived bioclimatic predictors for aquatic invasive species
Aquatic invasive species (AIS) present major ecological and economic challenges globally, endangering ecosystems and human livelihoods. Managers and policy makers thus need tools to predict invasion risk and prioritize species and areas of concern, and they often use native range climate matching to determine whether a species could persist in a new location. However, climate matching for AIS ofteAuthorsRyan C. Burner, Wesley Daniel, Peder S. Engelstad, Christopher J. Churchill, Richard A. EricksonAssessing impacts of human stressors on stream fish habitats across the Mississippi River basin
Effective conservation of stream fishes and their habitats is complicated by the fact that human stressors alter the way in which natural factors such as stream size, catchment geology, and regional climate influence stream ecosystems. Consequently, efforts to assess the condition of stream fishes and their habitats must not only attempt to characterize the effects of human stressors but must accoAuthorsJared Ross, Dana M. Infante, Arthur R. Cooper, Joanna B. Whittier, Wesley DanielWhen are environmental DNA early detections of invasive species actionable?
Environmental DNA (eDNA) sampling provides sensitive early detection capabilities for recently introduced taxa. However, natural resource managers struggle with how to integrate eDNA results into an early detection rapid response program because positive eDNA detections are not always indicative of an eventual infestation. We used a structured decision making (SDM) framework to evaluate appropriatAuthorsAdam J. Sepulveda, Christine E. Dumoulin, Denise L. Blanchette, John Mcphedran, Colin Holme, Nathan Whalen, Margaret Hunter, Christopher M. Merkes, Catherine A. Richter, Matthew Neilson, Wesley Daniel, Devin Nicole Jones, David R. SmithPlant migration due to winter climate change: Range expansion of tropical invasive plants in response to warming winters
Warming winters due to climate change can facilitate the range expansion of invasive non-native species. In the southeastern United States, the frequency and intensity of extreme winter temperatures determines the northern range limits of many tropical organisms including many species of invasive non-native plants. However, the effects of winter climate change on invasive species’ range limits havAuthorsMichael Osland, Bogdan Chivoiu, Laura Feher, Leah Dale, Deah Lieurance, Wesley Daniel, Jessica E. SpencerCommunity for data integration 2019 project report
The U.S. Geological Survey Community for Data Integration annually supports small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 14 projects supported in fiscal year 2019 and outlines their goals, activities, and accomplishments. Proposals in 2019 were encouraged to addreAuthorsAmanda N. Liford, Caitlin M. Andrews, Aparna Bamzai, Joseph A. Bard, David S. Blehert, John B. Bradford, Wesley M. Daniel, Sara L. Caldwell Eldridge, Frank Engel, Jason A. Ferrante, Amy K. Gilmer, Margaret E. Hunter, Jeanne M. Jones, Benjamin Letcher, Frances L. Lightsom, Richard R. McDonald, Leah E. Morgan, Sasha C. Reed, Leslie HsuByEcosystems Mission Area, Water Resources Mission Area, Science Synthesis, Analysis and Research Program, Science Analytics and Synthesis (SAS) Program, Volcano Hazards Program, Community for Data Integration (CDI), Geology, Geophysics, and Geochemistry Science Center, Geosciences and Environmental Change Science Center, National Wildlife Health Center, Oklahoma-Texas Water Science Center, Southwest Biological Science Center, Volcano Science Center, Western Geographic Science Center, Wetland and Aquatic Research Center , Woods Hole Coastal and Marine Science Center, Science Data ManagementGaining decision-maker confidence through community consensus: Developing environmental DNA standards for data display on the USGS Nonindigenous Aquatic Species database
To advance national efforts for the detection and biosurveillance of aquatic invasive species (AIS), we employed a community consensus process to enable the incorporation of environmental DNA (eDNA) detection data into the U.S. Geological Survey’s (USGS) Nonindigenous Aquatic Species (NAS) database (https://nas.er.usgs.gov/eDNA/). Our goal was to identify minimum standards and best practices for tAuthorsJason Ferrante, Wesley Daniel, Jonathan (Contractor) Adam Freedman, Katy E. Klymus, Matthew Neilson, Yale Passamaneck, Christopher B. Rees, Adam J. Sepulveda, Margaret HunterClimate matching with the climatchR R package
Climate matching allows comparisons of climatic conditions between different locations to understand location and species range climatic suitability. The approach may be used as part of horizon scanning exercises such as those conducted for invasive species. We implemented the CLIMATCH algorithm into an R package, climatchR. The package allows automated and scripted climate matching exercises acroAuthorsRichard A. Erickson, Peder S Engelstad, Catherine S. Jarnevich, Helen Sofaer, Wesley DanielUsing structured decision making to evaluate potential management responses to detection of dreissenid mussel (Dreissena spp.) environmental DNA
Environmental (e)DNA tools are sensitive and cost-effective for early detection of invasive species. However, the uncertainty associated with the interpretation of positive eDNA detections makes it challenging to determine appropriate natural resource management responses. Multiple sources of error can give rise to positive detections of eDNA in a sample when individuals of that species are not prAuthorsAdam J. Sepulveda, David R. Smith, Katherine M O'Donnell, Nathan Owens, Brittany White, Catherine A. Richter, Christopher M. Merkes, Skylar Wolf, Mike Rau, Matthew Neilson, Wesley Daniel, Christine E. Dumoulin, Margaret Hunter - Software
High-throughput calculations of climatch scores
Matching climate envelopes allows people to examine how potential invasive species may match habitats. This repository contains code for using the climatchR package for high-throughput calculations of climatch scores for species using GBIF data. Climatch is based upon the climatch algorithm as implemented through the climatchR package.climatchR: An implementation of Climatch in R
Matching climate envelopes of allows people to examine how potential invasive species may match habitats. The Australian government created Climatch to do allow for these comparisons. However, this webpage does not allow for readily scripting climate matching. Hence, the authors created climatchR, an R package (R Core Team 2020) implementing the climatch method in R. This was created to allow auto - News