Links to reports of aquatic ecosystems research at the Western Fisheries Research Center (WFRC) emphasizing the understanding of ecological processes for aquatic systems, including river basins, riparian areas, wetlands, and estuaries.
Programs of the Aquatic Ecology Branch on landscape ecology and GIS, molecular genetics, environmental contaminants, stream ecology, and other aspects of aquatic ecology in eastern United States.
Previous analysis showed this area to have reduced macroinvertebrate biodiversity, an important measure of ecosystem health. New observations indicate that conditions have improved; report includes methods and results of sampling.
A web-enabled database that provides for the capture, curation, integration, and delivery of bioassessment data collected by USGS, principally macroinvertebrate, algae, fish, and supporting habitat data from rivers and streams.
This web site is an outgrowth of an agreement between the USGS and the New England Aquarium, designed to summarize and make available results of scientific research. It will also present educational material of interest to wide audiences.
Describes research to assess the effectiveness of the current system and distribution of marine reserves and protected areas in the Virgin Islands and Puerto Rico for conserving reef ecosystems and resources.
This program is focused on the study of fishes, fisheries, aquatic invertebrates, and aquatic habitats, and evaluates factors that affect aquatic organism health, population fitness, biological diversity, and aquatic community and habitat function.
Snakeheads, aggressive airbreathing freshwater fishes that are not native to North America, are considered injurious to certain native North American fish and other aquatic wildlife.
A national information resource for locating biogeographic accounts of non-indigenous aquatic species in the U.S. Provided are scientific reports, online/real-time queries, spatial data sets, regional contact lists, and general information.
Main page for accessing links for information and data on the San Francisco Bay estuary and its watershed with links to highlights, water, biology, wetlands, hazards, digital maps, geologic mapping, winds, bathymetry and overview of the Bay.
Project of the Gulf of Mexico Integrated Science program that evaluates the transport and sedimentation of contaminates through the Mississippi River and Atchafalaya River delta to the near-shore Gulf of Mexico. Includes aerial photographs.
A geologic and oceanographic study of the waters and Continental Shelf of Gulf of the Farallones adjacent to the San Francisco Bay region. The results of the study provide a scientific basis to evaluate and monitor human impact on the marine environment.
Biomonitoring of Environmental Status and Trends (BEST) program is designed to assess and monitor the effects of environmental contaminants on biological resources with links to detailed information on specific species.
Manual for research program on the nesting habits of sea turtles of the Virgin Islands, with descriptions of species, nesting behavior, observation methods, record keeping, tagging, and tissue sample collection. (PDF file, 121 pp.)
Identification of epiphytes (plants obtaining moisture and nutrients from the air and rain and usually living on another plant) on seaweed in Tampa Bay, Florida. Abstract of symposium presentation with photos.
Information on USGS studies of Chesapeake Bay, the nation's largest estuary, concerned with water quality, ecosystem history and change, vital habitat and biological resources, and land use studies.
Detailed publication on the classification system for an inventory of wetlands and deepwater habitats of the United States used to describe ecological taxa and arrange them in a system useful to resource managers.
Changes in both the ocean and coastal ecosystems may have negative effects on sea otter populations in the coastal Northwest and Alaska. A study underway will examine these factors and the overall health of sea otter populations.
Declines in fish and wildlife populations, water-quality issues, and changes in coastal habitats have prompted this USGS study of the region's nearshore life and environment. Includes links to data from published reports.
Website for the Columbia Environmental Research Center with links to staff, publications, databases, field stations, and projects including those on the Rio Grande, burrowing owls, sea turtles, and geospatial technology.
Links to Columbia Environmental Research Center online databases with text, data, and metadata on toxicity, Missouri River, biomonitoring of environmental status and trends, contaminants, and sediments.
Links to electronic publications of the Columbia Environmental Research Center (CERC) including journal articles and full-text publications accessible by publication series and subjects.
Web site for an Internet Map Service (IMS) serving base cartographic data, USGS data, science applications and real time modelling analyses for the Columbia River basin using geospatial analysis technology.
Record-high seawater temperatures and calm seas in the summer of 2005 led to the most severe coral bleaching (death) ever observed in the U.S. Virgin Islands.
Report with mini-movie and photos on the hypothesis that the atmospheric transport of dust arising from the desertification in northern Africa led to algal infestation of corals, coral diseases, and the near extinction of associated sea urchins.
Shows how coral reef specimens are collected, the type of information gained from them, and the methods by which they are measured and studied to understand recent (past few centuries) changes in climate.
We conduct systematic imaging of reef habitats in order to provide regulatory agencies with information they need to decide whether those reefs should be designated as protected areas.
By measuring the current and historical growth rates of coral skeletons, and using field experiments, we intend to find out whether rising atmospheric CO2 and rising sea levels will cause coral reefs to erode and cease to function.
Sixty-five sampling sites, selected by a statistical design to represent lengths of perennial streams in North Dakota, were chosen to be sampled for water chemistry and mercury in fish tissue to establish unbiased baseline data.
Constructed farm ponds represent significant breeding, rearing, and overwintering habitat for amphibians in the Driftless Area Ecoregion of Minnesota, Wisconsin, and Iowa. Links to fact sheet, brochure, annual reports, field manual, and final report.
Field methods, topics of investigation, shoreline changes, publications, and satellite imagery related to geologic and hydrologic processes affecting Lake Pontchartrain and adjacent lakes which form a large estuary in the Gulf Coast region.
Site for Great Lakes Science Center, Ann Arbor, which provides information about biological resources in the Great Lakes Basin. Links to personnel, publications, data, library, facilities, research vessels, Great Lakes issues, and research.
Deep-sea corals, also known as cold-water corals, have become a topic of interest due to conservation concerns over the impacts of trawling, exploration for oil and gas, and climate change.
A white paper describing a plan for USGS research in Gulf of Mexico estuaries, developed in 2001 using Tampa Bay as an example with links to program strategy and design.
Website of the Gulf of Mexico Integrated Science program to understand the framework and processes of the Gulf of Mexico using Tampa Bay as a pilot study. Links to publications, digital library, water chemistry maps, epiphytes, and field trips.
A brief definition and explanation of hypoxia with special reference to the Gulf of Mexico hypoxic zone along the Louisiana-Texas coast as well as extensive links to USGS and other related information resources.
Information about the causes and impact of hypoxia with links to USGS and other Federal agency information and activities related to nutrients in the Mississippi River Basin and hypoxia in the Gulf of Mexico.
Article from Status and Trends of the Nation's Biological Resources on the serious impacts to river systems due to damming and flow regulation, and rehabilitation, monitoring, and research on such rivers.
Explains sources of mercury in the air, ways in which mercury is concentrated in animals, and describes how we measure deposition of atmospheric mercury, with summaries of observations.
Handbook on monitoring methods for lake management, including program design, sampling methods and protocol, biota and chemical sampling methods, laboratory methods, preservation of data and samples, glossary, and bibliography. (PDF file, 92 pp.)
This website is a gateway to information and data on Lake Tahoe with links to Lake Tahoe Initiative, geography, history, lake facts, GIS Data, DEM, DOQ, DLG imagery, bathymetry, satellite imagery, land cover, census, soils, pictures, and general maps.
Describes the types of concerns and observations used to help area resource managers analyze actual or potential changes in this highly developed ecosystem.
Homepage for the Leetown Science Center in West Virginia conducting research on aquatic and terrestrial organisms and their supporting ecosystems with links to directions, general description, library, projects, fact sheets, and facilities.
Macroinvertebrate data collected by USGS or USFS from 73 sites from 2000 to 2007 and algal data collected from up to 26 sites between 2000 and 2001 in the Eagle River watershed, with emphasis on methods of sample collection and data processing.
Brief description of the research program to inventory the natural resources of Monterey Bay National Marine Sanctuary with links to cruises, and publications and products, including an internet map server, imagery, and geologic descriptions.
Home page on hydrology studies on mercury, the most common contaminant of aquatic ecosystems, with links to general information, research team projects and data.
Plan for an upcoming study, at the microbiological scale, of the benthic communities (including corals) that reside in and around mid-Atlantic canyons, which are located at the edge of the continental shelf.
Portal for Missouri River Infolinks, a clearinghouse to multiple links giving Missouri information, photo gallery, river weather forecast, projects and features, maps, meetings, history, and science research.
Webpage based on USGS Open File Report 98-139 links to information on the San Francisco Bay estuary to study dredge disposal effects, fish habitats, sediment transport, rock pinnacles and navigation, and consequences of a large oil spill.
Georeferenced high-resolution mapping of bathymetry of the West Florida Shelf, Gulf of Mexico of areas suspected to be critical benthic habitats for fisheries. Includes links to images, data, metadata, and TIFF image files.
Geological research of the Stellwagen Bank National Marine Sanctuary sea floor are presented in the form of maps, posters, fact sheets, sonar images, and bottom photographs.
Homepage for the Nearshore Benthic Habitats Project for mapping geophysical characterization of the coastal sea floor to identify benthic fish and shellfish habitat with links to research cruises and preliminary results.
Descriptions of amphibians and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on amphibians.
Descriptions of annelids and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on annelids.
Descriptions of bryozoans and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on bryozoans.
Descriptions of coelenterates and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on coelenterates.
Descriptions of crustaceans and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on crustaceans.
Descriptions of fishes and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on fishes.
Descriptions of mammals and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on mammals.
Descriptions of mollusks and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on mollusks.
Brief descriptions of programs of research on aquatic nonindigenous plants and animals at the Florida Integrated Science Center with links to descriptions, videos, posters, and reports on various exotic plant and animals species.
Descriptions of reptiles and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on reptiles.
Descriptions of sponges and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on sponges.
Descriptions of tunicates and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on tunicates.
Descriptions of vascular plants and examples of the deleterious effects of nonindigenous species, with links to distribution maps, species lists and related information on vascular plants.
Brief report on sidescan sonar data, sediment sampling, and submersible and video photography studies of destruction of deep-water coral pinnacles where fish spawn off east-central Florida in the Oculina Bank in order to restore and protect the habitat.
Site for the Platte River Program in Nebraska an area that is a critical staging area for migratory waterbirds of the Central Flyway. Includes links to color-infrared aerial photos, 1938 historic aerial photos, and Cottonwood Ranch research site.
Report on problems in preserving coral reef ecosystems with links to information on the interagency U.S. Coral Reef Task Force, press releases, reports, and NOAA coral reef sites.
Explains how this potentially harmful invasive species arrived, why we are concerned, where in the area it is found, what environmental factors control its spread, and what might be done in response.
Links to science programs on upper Midwest river inventory and monitoring with links to databases on macroinvertebrates, fisheries, vegetation, water quality, bathymetry, floodplain forest, wildlife, sediment, contaminants and nutrients.
Literature review of sago pondweed, a submersed angiosperm that attracts waterfowl, but is also a nuisance plant that clogs irrigation systems. Includes classification, distribution, habitat, physiology, management, and economics.
Review of a study monitoring changes in salinity in Alligator Bay, NC during a 1996 hurricane due to the influx of fresh and saltwater and the effect it would have on oyster aquaculture.
Provides location-depth grids of bathymetry available for San Francisco Bay and tools for examining those grids. Data provided as GIS grids and animations.
Report on satellite imagery collected by the NOAA Advanced Very High Resolution Radiometer (AVHRR) on NOAA polar-orbiting weather satellites. Links are provided to imagery of north-central Gulf of Mexico and of the Lake Pontchartrain.
The U.S. Geological Survey established a sediment trap in the northern Gulf of Mexico to collect time-series data on the flux and assemblage composition of live planktic foraminifers. This report provides an update of the 2008 time-series data to include
Sediment from rivers has both beneficial and detrimental effects on ecosystems and human activities around Puget Sound. We explain where the sediment comes from, how it is transported, and the nature of the data that we can use to understand it.
A pictorial overview for general audiences of key landscapes and ecosystems in South Florida; includes extensive references and links to past and current research activities relating to the South Florida ecosystem restoration effort.
Children's website on southern Florida aquatic biology with short movie clips of amphibians, games & puzzles, wildlife pictures, teacher resources, and more.
Research with a primary focus on coastal and marine environments and societal implications of natural hazards, resource sustainability, and environmental change.
Change in streams accompanying land and water use may affect benthic invertebrate assemblage composition and structure through changes in density of invertebrates or taxa richness, the number of different species living in the stream.
Report on the status of the biota and ecological factors of the inland lakes of the Great Lakes Cluster Parks: Indiana Dunes, Sleeping Bear Dunes,and Pictured Rocks National Lakeshores and Isle Royale and Voyageurs National Parks. (PDF file, 321 p.)
Combined with supporting research in reproductive physiology, identification of spawning habitat, and early life history this result provides new understanding of environmental factors that might affect reproduction of this endangered species.
Suspended-sediment concentration data were collected in San Francisco Bay during water year 2000 using optical backscatterance sensors and water samples. This report presents the data-collection methods, data, and calibration plots.
Interactive Mapping Service (IMS) is an Internet based Geographic Information System designed to provide users with online mapping capability of habitats, land use and land cover, and seagrass for areas of Tampa Bay.
Overview of interdisciplinary research on the Tampa Bay estuary of the Gulf of Mexico with links to digital library, interactive mapping, reports, posters, water chemistry maps, meetings and conferences, scientist directory, and field trips.
Information and links to USGS and other Federal agency monitoring and research concerning the hypoxic zone in the northern Gulf of Mexico occurring along the Louisiana-Texas coast.
An introduction to three related USGS digital libraries: the general-purpose Marine Realms Information Bank (MRIB); the regionally focused Monterey Bay Science (MBS) Digital Library; and the topically focused Coastal Change Hazards (CCH) Digital Library.
Palmyra Atoll in the tropical Pacific is a "living laboratory" for multi-disciplinary research on coral reef ecosystems, insular terrestrial ecosystems, climate change, and the lingering effects of Cold War nuclear testing.
Article from American Scientist on study of the San Francisco Bay estuary as a component of the global climate system showing that natural fluctuations might be mistaken for anthropogenic trends affecting waterflow and salinity.
This report serves as an environmental review and framework for developing USGS programs in the south Florida ecosystem, especially the Everglades and its watershed, and stresses the critical role of water in natural and human environment.
Summary of a circular on USGS environmental research and Chesapeake Bay with links to full document. Includes discussion of the problems of the estuary, restoration efforts, water quality, and effects on ecosystem.
Outlines tactical problems that make it difficult for beach managers to use scientific information to make beach closure and advisory decisions. Explains methodologies we are using to address those problems and better prepare local decision makers.
The Sacramento-San Joaquin River Delta is the hub of California's water system and an important habitat for fish and wildlife. USGS research has provided resource managers and other stakeholders with a good understanding of how pesticides enter the Delta.
Homepage for Upper Midwest Environmental Science Center, LaCrosse, Wisconsin, with links to data library, geographical search, science programs, partnerships, long-term resource monitoring program, reports and publications, and education.
Overview of research in the Hawaiian Islands and Guam to gain insight into the structure of coral reefs, to provide the basis for future monitoring, and to understand the influences of natural processes and human activities on coral reef health.
Extreme storms, sea-level rise, and the health of marine communities are some of the major societal and environmental issues studied by this part of USGS.
Explains type of information we collect and the problems we study in this area, focusing on coral reef ecosystems, ocean acidification, and sea-level change.
Thirty year database of water-quality data, visual data displays, and project information on the San Francisco Bay directed towards following and understanding changes in the water quality of San Francisco Bay.
Brief descriptions of categories of USGS research programs and projects on water resources in Michigan with links to more detailed information on projects.
Links to descriptions, maps, photos, and reports of projects related to studies of the effects of dams and flow regulation in watersheds altered by humans in the state of Michigan including Muskegon and Kalamazoo Rivers and the Seney refuge.
Brief description of the Western Fisheries Research Center in Seattle devoted to research on fish populations and aquatic ecosystems of the West. Links to research programs, laboratory locations, publications, and map services.
Information on the NWRC Wetlands Ecology Branch, which conducts research related to sustainable management and restoration of the nation's coastal saltwater wetlands, freshwater wetlands, submerged aquatic ecosystems, and coastal prairie.