eDNAoccupancy
October 18, 2017
This repository contains the source code and package for the eDNAoccupancy package. This readme file contains the installation instructions for the package.
The purpose of the R package is to fit three-level occupancy models. Although designed with eDNA-based observations, the package can be used for any occupancy situation with sampling and sub-sampling.
Citation Information
| Publication Year | 2017 |
|---|---|
| Title | eDNAoccupancy |
| DOI | 10.5066/F7Q23Z67 |
| Authors | Robert M. Dorazio, Richard A Erickson |
| Product Type | Software Release |
| Record Source | USGS Digital Object Identifier Catalog |
| USGS Organization | Wetland and Aquatic Research Center |
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eDNAoccupancy: An R package for multi-scale occupancy modeling of environmental DNA data
In this article we describe eDNAoccupancy, an R package for fitting Bayesian, multi-scale occupancy models. These models are appropriate for occupancy surveys that include three, nested levels of sampling: primary sample units within a study area, secondary sample units collected from each primary unit, and replicates of each secondary sample unit. This design is commonly used in occupancy surveys
Authors
Robert Dorazio, Richard A. Erickson
Related Content
eDNAoccupancy: An R package for multi-scale occupancy modeling of environmental DNA data
In this article we describe eDNAoccupancy, an R package for fitting Bayesian, multi-scale occupancy models. These models are appropriate for occupancy surveys that include three, nested levels of sampling: primary sample units within a study area, secondary sample units collected from each primary unit, and replicates of each secondary sample unit. This design is commonly used in occupancy surveys
Authors
Robert Dorazio, Richard A. Erickson