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Publications

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Effects of riparian forest thinning on resident salmonid fishes in coastal northern California catchments

Resource managers are interested in whether thinning second-growth forests may be a viable restoration strategy for stream and riparian habitats, but may be concerned about the potential impacts that increases in stream temperature associated with riparian thinning treatments may have on cold-water salmonid fishes.We evaluated the effects of riparian forest thinning on resident...
Authors
David A. Roon, Jason B. Dunham, Joseph R. Benjamin, Bret C. Harvey, James R Bellmore

New technology for an ancient fish: A lamprey life cycle modeling tool with an R Shiny application

Lampreys (Petromyzontiformes) are an ancient group of fishes with complex life histories. We created a life cycle model that includes an R Shiny interactive web application interface to simulate abundance by life stage. This will allow scientists and managers to connect available demographic information in a framework that can be applied to questions regarding lamprey biology and...
Authors
Dylan Gerald-Everett Gomes, Joseph R. Benjamin, Benjamin J. Clemens, Ralph Lampman, Jason B. Dunham

A partner-driven decision support model to inform the reintroduction of bull trout

Assessments of species reintroductions involve a series of complex decisions that include human perspectives and ecological contexts. Here, we present a reintroduction assessment involving bull trout (Salvelinus confluentus) using a structured decision-making process. We approached this assessment by engaging partners representing public utilities, government agencies, and Tribes with...
Authors
Joseph R. Benjamin, Judith Neibauer, Hugh Anthony, Jose Vazquez, Ashley Rawhouser, Jason B. Dunham

Safety and immunogenicity of poultry vaccine for protecting critically endangered avian species against highly pathogenic avian influenza virus, United States

In 2023, an outbreak of highly pathogenic avian influenza occurred among critically endangered California condors (Gymnogyps californianus), and >21 died. We evaluated safety, immunogenicity, vaccination strategies, and correlates of antibody response of an influenza vaccine for poultry in black vultures (Coragyps atratus) and then California condors. We noted differences in antibody...
Authors
Todd E. Katzner, Ashleigh V. Blackford, Mary Donahue, Samantha E.J. Gibbs, Julianna B. Lenoch, Michael K. Martin, Tonie E. Rocke, J. Jeffrey Root, Darren Styles, Sunny Cooper, Kristin Dean, Zachary Dvornicky-Raymond, Dominique Keller, Carlos Sanchez, Brett Dunlap, Thomas Grier, Michael P. Jones, Gregory Nitzel, Erin Patrick, Maureen Purcell, Aaron J. Specht, David L. Suarez

Ecological thresholds and transformations due to climate change: The role of abiotic stress

An ecological threshold is the point at which a comparatively small environmental change triggers an abrupt and disproportionately large ecological response. In the face of accelerating climate change, there is concern that abrupt ecosystem transformations will become more widespread as critical ecological thresholds are crossed. There has been ongoing debate, however, regarding the...
Authors
Michael Osland, John B. Bradford, Lauren Toth, Matthew Germino, James Grace, Judith Z. Drexler, Camille Stagg, Eric E. Grossman, Karen M. Thorne, Stephanie Romanach, Davina Passeri, Gregory Noe, Jessica R. Lacy, Ken Krauss, Kurt P. Kowalski, Glenn R. Guntenspergen, Neil K. Ganju, Nicholas Enwright, Joel A. Carr, Kristin B. Byrd, Kevin Buffington

Costs of land treatments on public lands in the western United States

Public land managers often conduct rehabilitation and restoration actions to achieve desired conditions or specific natural resource objectives. These “land treatments” include a variety of techniques, such as biomass removal or manipulation, seeding, and herbicide application. Limited information exists on the costs of conducting many common types of land treatments, but such...
Authors
James Meldrum, Christopher Huber, Adrian P. Monroe, Bryan C. Tarbox, Michelle Jeffries, David Pilliod, Cameron L. Aldridge

Invasion of perennial sagebrush steppe by shallow-rooted exotic cheatgrass reduces stable forms of soil carbon in a warmer but not cooler ecoregion

Soil organic carbon ('SOC') in drylands comprises nearly a third of the global SOC pool and has relatively rapid turnover and thus is a key driver of variability in the global carbon cycle. SOC is also a sensitive indicator of longer-term directional change and disturbance-responses of ecosystem C storage. Biome-scale disruption of the dryland carbon cycle by exotic annual grass...
Authors
Sydney Maya Katz, Toby Matthew Maxwell, Marie-Anne de Graaff, Matthew Germino

Cytotype and local adaptation drive phenotypic variation in two subspecies of big sagebrush (Artemisia tridentata)

Big sagebrush (Artemisia tridentata) is a widespread and locally dominant shrub throughout many ecosystems in western North America. A. tridentata ssps. tridentata and wyomingensis are two subspecies whose populations occupy the warm-arid regions of the species range and whose trailing edge is threatened by climate change. Previous studies have presented conflicting results in relation...
Authors
Spencer R. Roop, Keith Reinhardt, Ken A. Aho, Matthew Germino, Bryce A. Richardson

Contrasting magnitude and timing of pulsed aqueous methylmercury bioaccumulation across a reservoir food web

Water column hypoxia is a key process influencing methylmercury (MeHg) production and availability in waterbodies worldwide. During seasonal destratification, large, short-lived pulses of aqueous MeHg may be released into the subsequently mixed water column, but little is known about the fate of these pulses, particularly whether there are concomitant increases in MeHg uptake into...
Authors
James Willacker, Collin A. Eagles-Smith, Austin K. Baldwin, Michael T. Tate, Brett A. Poulin, Jesse Naymik, David P. Krabbenhoft, Ralph Myers, James A. Chandler

How will we prepare for an uncertain future? The value of open data and code for unborn generations facing climate change

As the impacts of climate change continue to intensify, humans face new challenges to long-term survival. Humans will likely be battling these problems long after 2100, when many climate projections currently end. A more forward-thinking view on our science and its direction may help better prepare for the future of our species. Researchers may consider datasets the basic units of...
Authors
Dylan Gerald-Everett Gomes

Using GPS tracking data to validate the conservation value of bird migration counts

Effective conservation of migratory birds requires gathering of information about their population trends, often acquired using migratory bird counts. These schemes ideally operate at migratory bottlenecks, through which a significant portion of the counted migratory populations is funneled. Yet it is rare to validate the conservation value of the data from these counts. Here we perform...
Authors
Ron Efrat, Yael Lehnardt, Daniel Berkowic, Yossi Leshem, Roi Dor, Alexander E. Bragin, Evgeny Bragin, Todd E. Katzner, Nir Sapir

Prairie Falcon (Falco mexicanus) abundance in a National Conservation Area in Idaho has increased since the 1970s–1990s

The Morley Nelson Snake River Birds of Prey National Conservation Area (NCA), in southwestern Idaho, USA supports a large population of breeding Prairie Falcons (Falco mexicanus). Abundance of Prairie Falcons in the NCA was previously monitored in 1976–1978 and 1990–1994. That research indicated maximum counts for each period in 1976 and 1992 and a possible population decline across that...
Authors
Steven Alsup, James R. Belthoff, Karen Steenhof, Michael N. Kochert, Todd E. Katzner
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