Algal and Environmental Toxins Research Laboratory — Lawrence, Kansas
Advanced Techniques are Used to Identify Algal Toxins
Scientists Routinely Evaluate Equipment Performance
The Laboratory Analyzes Algal Toxins
to inform questions about fish and wildlife health
Scientists Use a Variety of Analytical Techniques to Analyze Samples
About the Laboratory
The Environmental Health Program collaborates with scientists at the Organic Geochemistry Research Laboratory (OGRL) in Lawrence, Kansas, to develop and employ targeted and non-targeted analytical methods for identification and quantitation of known and understudied algal/cyanobacterial toxins. The laboratory contructed in 2019 is a 2,500 square foot modern laboratory facility with enhanced capabilities for algal toxin detection and increased throughput. This research is used to meet the growing demand for reliable algal toxin data and better definition of potential human and wildlife health effect thresholds of toxin exposure.
Algal and Environmental Toxins Research Laboratory
The Algal and Environmental Toxins Research Laboratory (AET) Core Technology Team (CTT), part of the USGS Environmental Health Program, focuses on developing methods to support research on harmful algal blooms and algal and cyanobacterial toxins (aka. cyanotoxins). These toxins, including anatoxins, cylindrospermopsins, domoic acids, gymnodimines, microcystins, nodularins, okadaic acids, pectinotoxins, and saxitoxins are produced during algal blooms and can have adverse health effects on humans and wildlife. The CTT employs advanced analytical techniques to monitor, identify, and quantify these toxins, as well as other algal toxins and secondary metabolites. Additionally, the AET CTT works on laboratory and field-based methods development for validation/verification of remotely sensed data through traditional water quality measurements, algal pigments, and spectroscopy. The AET CTT directly supports the Environmental Health Toxins and Harmful Algal Blooms Integrated Science Team and collaborates with other researchers from different government agencies to study cyano- and algal toxins. They seek to expand research opportunities to advance our understanding of these environmental toxins and their potential impacts.
Key Analytical Capabilities
- Absolute quantitation of cyanobacteria and algal toxins
- Identification and relative quantitation of cyanobacteria and algae secondary metabolites
- Custom method/matrix development

Laboratory Methods
The AET CTT is committed to innovation, always working on new ways to improve their research methods by embracing the latest technology and equipment. They focus on enhancing their techniques by combining new tools with their existing processes, using two main types of analytical methods:
Targeted Methods: These are specific tests designed to detect toxins. Some of the techniques they use include:
- ELISA (Enzyme-Linked Immunosorbent Assay): A popular lab technique that can quickly identify and measure substances, especially proteins or toxins.
- Liquid Chromatography-Mass Spectrometry (LC-MS): A highly sensitive method for analyzing mixtures and identifying different compounds based on their mass and chemical properties.
- Chromatography with UV-Fluorescence Detection: This method uses light to help detect and analyze certain compounds in samples.
Nontargeted Methods: These approaches look at a broader range of compounds without focusing on specific ones. They include:
- LC-HRMS: A method similar to LC-MS but offers higher resolution, allowing for better identification of substances.
- FT-IR (Fourier Transform Infrared Spectroscopy): A technique that uses infrared light to identify materials based on how they absorb light.
- UV-Vis Spectroscopy: This method measures how much UV and visible light a substance absorbs, helping to identify its chemical makeup.
- Hyperspectral Radiometry: This method measures visible light of substances in field settings for development of remote sensing algorithms and validation/verification of satellite data.

Key Instrumentation
- Two liquid chromatograph high resolution mass spectrometers for chemical quantitation and qualitative measurements
- Liquid chromatograph triple quadrupole mass spectrometer for chemical quantitation
- Liquid chromatograph with diode array and fluorimeter detectors
- ELISA plate readers and spectroscopy (UV-Vis, FT-IR, XRF)
- Extraction equipment
Below are data associated with this project.
Microcystin, chlorophyll, and cell-count data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 9 to 17, 2017 Microcystin, chlorophyll, and cell-count data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 9 to 17, 2017
Velocity test data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 10 to 13, 2017 Velocity test data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 10 to 13, 2017
Periphyton (1993-2011) and Water Quality (2014) Data for ET&C Article Entitled Spatial and Temporal Variation in Microcystins Occurrence in Wadeable Streams in the Southeastern USA Periphyton (1993-2011) and Water Quality (2014) Data for ET&C Article Entitled Spatial and Temporal Variation in Microcystins Occurrence in Wadeable Streams in the Southeastern USA
Below are publications associated with this project.
Integrative monitoring strategy for marine and freshwater harmful algal blooms and toxins across the freshwater-to-marine continuum Integrative monitoring strategy for marine and freshwater harmful algal blooms and toxins across the freshwater-to-marine continuum
Mixed organic and inorganic tapwater exposures and potential effects in greater Chicago area, USA Mixed organic and inorganic tapwater exposures and potential effects in greater Chicago area, USA
Methods used for the collection and analysis of chemical and biological data for the Tapwater Exposure Study, United States, 2016–17 Methods used for the collection and analysis of chemical and biological data for the Tapwater Exposure Study, United States, 2016–17
Understanding the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida Understanding the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida
Water-quality conditions with an emphasis on cyanobacteria and associated toxins and taste-and-odor compounds in the Kansas River, Kansas, July 2012 through September 2016 Water-quality conditions with an emphasis on cyanobacteria and associated toxins and taste-and-odor compounds in the Kansas River, Kansas, July 2012 through September 2016
Book review: Handbook of cyanobacterial monitoring and cyanotoxin analysis Book review: Handbook of cyanobacterial monitoring and cyanotoxin analysis
Associations between cyanobacteria and indices of secondary production in the western basin of Lake Erie Associations between cyanobacteria and indices of secondary production in the western basin of Lake Erie
Detection of microcystin and other cyanotoxins in lakes at Isle Royale National Park, Pictured Rocks National Lakeshore, and Sleeping Bear Dunes National Lakeshore, northern Michigan, 2012–13 Detection of microcystin and other cyanotoxins in lakes at Isle Royale National Park, Pictured Rocks National Lakeshore, and Sleeping Bear Dunes National Lakeshore, northern Michigan, 2012–13
Satellite monitoring of cyanobacterial harmful algal bloom frequency in recreational waters and drinking water sources Satellite monitoring of cyanobacterial harmful algal bloom frequency in recreational waters and drinking water sources
A method for examining temporal changes in cyanobacterial harmful algal bloom spatial extent using satellite remote sensing A method for examining temporal changes in cyanobacterial harmful algal bloom spatial extent using satellite remote sensing
A critical review of the postulated role of the non-essential amino acid, β-N-methylamino-L-alanine, in neurodegenerative disease in humans A critical review of the postulated role of the non-essential amino acid, β-N-methylamino-L-alanine, in neurodegenerative disease in humans
Water quality and bed sediment quality in the Albemarle Sound, North Carolina, 2012–14 Water quality and bed sediment quality in the Albemarle Sound, North Carolina, 2012–14
About the Laboratory
The Environmental Health Program collaborates with scientists at the Organic Geochemistry Research Laboratory (OGRL) in Lawrence, Kansas, to develop and employ targeted and non-targeted analytical methods for identification and quantitation of known and understudied algal/cyanobacterial toxins. The laboratory contructed in 2019 is a 2,500 square foot modern laboratory facility with enhanced capabilities for algal toxin detection and increased throughput. This research is used to meet the growing demand for reliable algal toxin data and better definition of potential human and wildlife health effect thresholds of toxin exposure.
Algal and Environmental Toxins Research Laboratory
The Algal and Environmental Toxins Research Laboratory (AET) Core Technology Team (CTT), part of the USGS Environmental Health Program, focuses on developing methods to support research on harmful algal blooms and algal and cyanobacterial toxins (aka. cyanotoxins). These toxins, including anatoxins, cylindrospermopsins, domoic acids, gymnodimines, microcystins, nodularins, okadaic acids, pectinotoxins, and saxitoxins are produced during algal blooms and can have adverse health effects on humans and wildlife. The CTT employs advanced analytical techniques to monitor, identify, and quantify these toxins, as well as other algal toxins and secondary metabolites. Additionally, the AET CTT works on laboratory and field-based methods development for validation/verification of remotely sensed data through traditional water quality measurements, algal pigments, and spectroscopy. The AET CTT directly supports the Environmental Health Toxins and Harmful Algal Blooms Integrated Science Team and collaborates with other researchers from different government agencies to study cyano- and algal toxins. They seek to expand research opportunities to advance our understanding of these environmental toxins and their potential impacts.
Key Analytical Capabilities
- Absolute quantitation of cyanobacteria and algal toxins
- Identification and relative quantitation of cyanobacteria and algae secondary metabolites
- Custom method/matrix development

Laboratory Methods
The AET CTT is committed to innovation, always working on new ways to improve their research methods by embracing the latest technology and equipment. They focus on enhancing their techniques by combining new tools with their existing processes, using two main types of analytical methods:
Targeted Methods: These are specific tests designed to detect toxins. Some of the techniques they use include:
- ELISA (Enzyme-Linked Immunosorbent Assay): A popular lab technique that can quickly identify and measure substances, especially proteins or toxins.
- Liquid Chromatography-Mass Spectrometry (LC-MS): A highly sensitive method for analyzing mixtures and identifying different compounds based on their mass and chemical properties.
- Chromatography with UV-Fluorescence Detection: This method uses light to help detect and analyze certain compounds in samples.
Nontargeted Methods: These approaches look at a broader range of compounds without focusing on specific ones. They include:
- LC-HRMS: A method similar to LC-MS but offers higher resolution, allowing for better identification of substances.
- FT-IR (Fourier Transform Infrared Spectroscopy): A technique that uses infrared light to identify materials based on how they absorb light.
- UV-Vis Spectroscopy: This method measures how much UV and visible light a substance absorbs, helping to identify its chemical makeup.
- Hyperspectral Radiometry: This method measures visible light of substances in field settings for development of remote sensing algorithms and validation/verification of satellite data.

Key Instrumentation
- Two liquid chromatograph high resolution mass spectrometers for chemical quantitation and qualitative measurements
- Liquid chromatograph triple quadrupole mass spectrometer for chemical quantitation
- Liquid chromatograph with diode array and fluorimeter detectors
- ELISA plate readers and spectroscopy (UV-Vis, FT-IR, XRF)
- Extraction equipment
Below are data associated with this project.
Microcystin, chlorophyll, and cell-count data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 9 to 17, 2017 Microcystin, chlorophyll, and cell-count data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 9 to 17, 2017
Velocity test data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 10 to 13, 2017 Velocity test data for assessing the effect of salinity tolerance on cyanobacteria associated with a harmful algal bloom in Lake Okeechobee, Florida, July 10 to 13, 2017
Periphyton (1993-2011) and Water Quality (2014) Data for ET&C Article Entitled Spatial and Temporal Variation in Microcystins Occurrence in Wadeable Streams in the Southeastern USA Periphyton (1993-2011) and Water Quality (2014) Data for ET&C Article Entitled Spatial and Temporal Variation in Microcystins Occurrence in Wadeable Streams in the Southeastern USA
Below are publications associated with this project.