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An evaluation of the Bayesian approach to fitting the N-mixture model for use with pseudo-replicated count data

January 1, 2011

The N-mixture model proposed by Royle in 2004 may be used to approximate the abundance and detection probability of animal species in a given region. In 2006, Royle and Dorazio discussed the advantages of using a Bayesian approach in modelling animal abundance and occurrence using a hierarchical N-mixture model. N-mixture models assume replication on sampling sites, an assumption that may be violated when the site is not closed to changes in abundance during the survey period or when nominal replicates are defined spatially. In this paper, we studied the robustness of a Bayesian approach to fitting the N-mixture model for pseudo-replicated count data. Our simulation results showed that the Bayesian estimates for abundance and detection probability are slightly biased when the actual detection probability is small and are sensitive to the presence of extra variability within local sites.

Publication Year 2011
Title An evaluation of the Bayesian approach to fitting the N-mixture model for use with pseudo-replicated count data
DOI 10.1080/00949655.2011.572881
Authors S.G. Toribo, B. R. Gray, S. Liang
Publication Type Article
Publication Subtype Journal Article
Series Title Journal of Statistical Computation and Simulation
Index ID 70005626
Record Source USGS Publications Warehouse
USGS Organization Upper Midwest Environmental Sciences Center