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LakeEnsemblR: An R package that facilitates ensemble modelling of lakes

September 1, 2021

Model ensembles have several benefits compared to single-model applications but are not frequently used within the lake modelling community. Setting up and running multiple lake models can be challenging and time consuming, despite the many similarities between the existing models (forcing data, hypsograph, etc.). Here we present an R package, LakeEnsemblR, that facilitates running ensembles of five different vertical one-dimensional hydrodynamic lake models (FLake, GLM, GOTM, Simstrat, MyLake). The package requires input in a standardised format and a single configuration file. LakeEnsemblR formats these files to the input required by each model, and provides functions to run and calibrate the models. The outputs of the different models are compiled into a single file, and several post-processing operations are supported. LakeEnsemblR's workflow standardisation can simplify model benchmarking and uncertainty quantification, and improve collaborations between scientists. We showcase the successful application of LakeEnsemblR for two different lakes.

Publication Year 2021
Title LakeEnsemblR: An R package that facilitates ensemble modelling of lakes
DOI 10.1016/j.envsoft.2021.105101
Authors Tadhg N. Moore, Jorrit P. Mesman, Robert Ladwig, Johannes Feldbauer, Freya Olsson, Rachel M. Pilla, Tom Shatwell, Jason J. Venkiteswaran, Austin D. Delany, Hilary Dugan, Kevin C. Rose, Jordan Read
Publication Type Article
Publication Subtype Journal Article
Series Title Environmental Modelling & Software
Index ID 70237357
Record Source USGS Publications Warehouse
USGS Organization WMA - Integrated Information Dissemination Division