Occupancy data for spatiotemporal distribution assessments of bull trout (Salvelinus confluentus) and rainbow trout (Oncorhynchus mykiss) in the Bruneau and Jarbidge River Basins, Idaho and Nevada, USA, in water year 2016

eDNA-based spatiotemporal distribution data (occupancy model format) for rainbow trout (Oncorhynchus mykiss) and bull trout (Salvelinus confluentus) within the Bruneau-Jarbidge Rivers Wilderness in southern Idaho and northern Nevada, USA. Data also include stream discharge and stream temperature data for each site. All data were collected between October 2015 and September 2016.