Software
An official USGS software project is code reviewed and approved at the bureau-level for distribution.
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Piping plover adult breeding dispersal and annual survival in the northern Great Plains, USA, model code Piping plover adult breeding dispersal and annual survival in the northern Great Plains, USA, model code
The affiliated manuscript examines adult survival and breeding dispersal for piping plovers at two spatial scales and examines covariates that influence them. This product includes the R and JAGS model code to run the models in the manuscript with the data from the affiliated data release.
Streamflow Rank Estimation (SRE) Model Streamflow Rank Estimation (SRE) Model
This repo contains the source code for the Streamflow Rank Estimation (SRE) model, which is a deep learning model designed to estimate streamflow using timelapse imagery. The model is built using PyTorch and can be run on any system with or without a GPU. This model has been integrated into the USGS Flow Photo Explorer, a cloud-based machine learning platform for training the model and...
STACS STACS
STACS: Software Tool for Approximating Channel Shapes Description The software application made available through this repository provides an integrated end-to-end workflow for modeling the geometry of river channel cross sections. This standalone program is called the Software Tool for Approximating Channel Shapes, or STACS for short, and provides convenient access to a flexible...
Agisoft Metashape Bounding Box Helper Tool Agisoft Metashape Bounding Box Helper Tool
The Bounding Box Helper written by Connor Jenkins in support of Selena Johnson's diver-based Structure-from-Motion processing workflow for precise application of bounding box dimensions between related chunks in Agisoft Metashape for extraction of identical data areas. The Bounding Box Helper is designed for two primary uses: to facilitate precise manipulation of bounding box dimensions...
Grazing Management Tool Grazing Management Tool
Science-based grazing management is crucial to preserving and improving rangeland productivity and sagebrush ecosystem health. By adjusting the timing, duration, frequency, and intensity of grazing, managers can contribute to ecosystem services such as fuel reduction and invasive annual grass control. They can also utilize rotational grazing to minimize or mitigate impacts on sensitive...
Uganda bird trends Uganda bird trends
Birds were surveyed using time-to-detection count methods across Uganda from 1985 to 2011. This code analyzes these data (from the associated data release) to test for relationships between tree cover, time (year), and species richness and occupancy.