Software
An official USGS software project is code reviewed and approved at the bureau-level for distribution.
Filter Total Items: 884
SSR_pipeline: Computer Software for the Identification of Microsatellite Sequences from Paired-End Illumina High-Throughput DNA Sequence Data SSR_pipeline: Computer Software for the Identification of Microsatellite Sequences from Paired-End Illumina High-Throughput DNA Sequence Data
SSR_pipeline is a flexible set of programs designed to efficiently identify simple sequence repeats (SSRs; for example, microsatellites) from paired-end high-throughput Illumina DNA sequencing data.
groundfailure groundfailure
This software is for calculating earthquake-induced ground failure hazard (i.e., landslide and liquefaction). These models are intended for regional or global scale applications, and are intended to be distributed in near-real-time, triggered by the Shakemaps.
Utility and Vulnerability Ranking Programs for Terrestrial Vertebrates Utility and Vulnerability Ranking Programs for Terrestrial Vertebrates
To assist decision makers in risk assessments, two sets of indices have been developed to rank terrestrial vertebrates for their utility in biomonitoring and susceptibility.
bi-transect-extractor bi-transect-extractor
This package is used to calculate coastal geomorphology variables along shore-normal transects. The calculated variables are used as inputs for modeling geomorphology using a Bayesian Network (BN).
bi-transect-extractor bi-transect-extractor
Python package to extract barrier island metrics along shore-normal transects for Bayesian Network Deep Dive
toxEval toxEval
Evaluation of measured concentration data using the ToxCast high-throughput screening database or a user-defined set of concentration benchmarks.