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User manual for Blossom statistical package for R

January 1, 2005

Blossom is an R package with functions for making statistical comparisons with distance-function based permutation tests developed by P.W. Mielke, Jr. and colleagues at Colorado State University (Mielke and Berry, 2001) and for testing parameters estimated in linear models with permutation procedures developed by B. S. Cade and colleagues at the Fort Collins Science Center, U.S. Geological Survey. This manual is intended to provide identical documentation of the statistical methods and interpretations as the manual by Cade and Richards (2005) does for the original Fortran program, but with changes made with respect to command inputs and outputs to reflect the new implementation as a package for R (R Development Core Team, 2012). This implementation in R has allowed for numerous improvements not supported by the Cade and Richards (2005) Fortran implementation, including use of categorical predictor variables in most routines.

Citation Information

Publication Year 2005
Title User manual for Blossom statistical package for R
DOI 10.3133/ofr20051353
Authors Marian Talbert, Brian S. Cade
Publication Type Report
Publication Subtype USGS Numbered Series
Series Title Open-File Report
Series Number 2005-1353
Index ID ofr20051353
Record Source USGS Publications Warehouse
USGS Organization Fort Collins Science Center

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