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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5115

Simulated high-latitude soil thermal dynamics during the past four decades Simulated high-latitude soil thermal dynamics during the past four decades

Soil temperature (Ts ) change is a key indicator of the dynamics of permafrost. On seasonal and inter-annual time scales, the variability of Ts determines the active layer depth, which regulates hydrological soil properties and biogeochemical processes. On the multi-decadal scale, increasing T 5 s not only drives permafrost thaw/retreat, but can also trigger and accelerate the...
Authors
S. Peng, P. Ciais, T. Wang, I. Gouttevin, A. D. McGuire, D. Lawrence, E. Burke, X. Chen, C. Delire, C. Koven, A. MacDougall, A. Rinke, K. Saito, W. Zhang, R. Alkama, T. J. Bohn, B. Decharme, T. Hajima, D. Ji, D.P. Lettenmaier, P.A. Miller, J.C. Moore, B. Smith, T. Sueyoshi

A pan-Arctic synthesis of CH4 and CO2 production from anoxic soil incubations A pan-Arctic synthesis of CH4 and CO2 production from anoxic soil incubations

Permafrost thaw can alter the soil environment through changes in soil moisture, frequently resulting in soil saturation, a shift to anaerobic decomposition, and changes in the plant community. These changes, along with thawing of previously frozen organic material, can alter the form and magnitude of greenhouse gas production from permafrost ecosystems. We synthesized existing methane...
Authors
Claire C. Treat, Susan M. Natali, Jessica Ernakovich, Colleen M. Iverson, Massimo Lupasco, A. David McGuire, Richard J. Norby, Taniya Roy Chowdhury, Andreas Richter, Hana Santruckova, C. Schädel, Edward A.G. Schuur, Victoria L. Sloan, Merritt R. Turetsky, Mark P. Waldrop

Upstream dispersal of an invasive crayfish aided by a fish passage facility Upstream dispersal of an invasive crayfish aided by a fish passage facility

Fish passage facilities for reservoir dams have been used to restore habitat connectivity within riverine networks by allowing upstream passage for native species. These facilities may also support the spread of invasive species, an unintended consequence and potential downside of upstream passage structures. We documented dam passage of the invasive virile crayfish, Orconectes virilis...
Authors
Stuart A. Welsh, Zachary J. Loughman

Synergistic and singular effects of river discharge and lunar illumination on dam passage of upstream migrant yellow-phase American eels Synergistic and singular effects of river discharge and lunar illumination on dam passage of upstream migrant yellow-phase American eels

Monitoring of dam passage can be useful for management and conservation assessments of American eel, particularly if passage counts can be examined over multiple years. During a 7-year study (2007–2013) of upstream migration of American eels within the lower Shenandoah River (Potomac River drainage), we counted and measured American eels at the Millville Dam eel pass, where annual study...
Authors
Stuart A. Welsh, Joni L. Aldinger, Melissa A. Braham, Jennifer L. Zimmerman

Nest predation research: Recent findings and future perspectives Nest predation research: Recent findings and future perspectives

Nest predation is a key source of selection for birds that has attracted increasing attention from ornithologists. The inclusion of new concepts applicable to nest predation that stem from social information, eavesdropping or physiology has expanded our knowledge considerably. Recent methodological advancements now allow focus on all three players within nest predation interactions...
Authors
Anna D. Chalfoun, J. D. Ibanez-Alamo, R. D. Magrath, Kenneth A. Schmidt, R. L. Thomson, Juan C. Oteyza, T. M. Haff, T. E. Martin

Quantifying avian predation on fish populations: integrating predator-specific deposition probabilities in tag-recovery studies Quantifying avian predation on fish populations: integrating predator-specific deposition probabilities in tag-recovery studies

Accurate assessment of specific mortality factors is vital to prioritize recovery actions for threatened and endangered species. For decades, tag recovery methods have been used to estimate fish mortality due to avian predation. Predation probabilities derived from fish tag recoveries on piscivorous waterbird colonies typically reflect minimum estimates of predation due to an unknown and
Authors
Nathan J. Hostetter, Allen F. Evans, Bradley M. Cramer, Ken Collis, Donald E. Lyons, Daniel D. Roby

Effects of effects of suspended sediment on early-life stage survival of Yaqui chub, an endangered USA–Mexico borderlands cyprinid Effects of effects of suspended sediment on early-life stage survival of Yaqui chub, an endangered USA–Mexico borderlands cyprinid

High levels of total suspended sediment (TSS) can have negative consequences on fishes, such as altering food supply, lowering food acquisition, clogging gills, and disrupting reproduction. While effects of TSS on salmonids and estuarine fish are well studied, less is known about possible negative impacts of suspended sediment on desert fishes. Several imperiled desert fishes inhabit...
Authors
Stephani L. Clark Barkalow, Scott A. Bonar

Occupancy modeling for improved accuracy and understanding of pathogen prevalence and dynamics Occupancy modeling for improved accuracy and understanding of pathogen prevalence and dynamics

Most pathogen detection tests are imperfect, with a sensitivity 100%, thereby resulting in the potential for a false negative, where a pathogen is present but not detected. False negatives in a sample inflate the number of non-detections, negatively biasing estimates of pathogen prevalence. Histological examination of tissues as a diagnostic test can be advantageous as multiple pathogens...
Authors
Michael E. Colvin, James T. Peterson, Michael L. Kent, Carl B. Schreck

Hybridization threatens shoal bass populations in the Upper Chattahoochee River Basin: Chapter 37 Hybridization threatens shoal bass populations in the Upper Chattahoochee River Basin: Chapter 37

Shoal bass are native only to the Apalachicola-Chattahoochee-Flint river system of Georgia, Alabama, and Florida, and are vulnerable to extinction as a result of population fragmentation and introduction of non-native species. We assessed the genetic integrity of isolated populations of shoal bass in the upper Chattahoochee River basin (above Lake Lanier, Big Creek, and below Morgan...
Authors
Elizabeth E Dakin, Brady A. Porter, Byron J. Freeman, James M. Long

Comparing models of Red Knot population dynamics Comparing models of Red Knot population dynamics

Predictive population modeling contributes to our basic scientific understanding of population dynamics, but can also inform management decisions by evaluating alternative actions in virtual environments. Quantitative models mathematically reflect scientific hypotheses about how a system functions. In Delaware Bay, mid-Atlantic Coast, USA, to more effectively manage horseshoe crab...
Authors
Conor P. McGowan

Importance of reservoir tributaries to spawning of migratory fish in the upper Paraná River Importance of reservoir tributaries to spawning of migratory fish in the upper Paraná River

Regulation of rivers by dams transforms previously lotic reaches above the dam into lentic ones and limits or prevents longitudinal connectivity, which impairs access to suitable habitats for the reproduction of many migratory fish species. Frequently, unregulated tributaries can provide important habitat heterogeneity to a regulated river and may mitigate the influence of impoundments...
Authors
P. S. da Silva, Maristela Cavicchioli Makrakis, Leandro E. Miranda, Sergio Makrakis, L. Assumpcao, S. Paula, Joao Henrique Pinheiro Dias, H. Marques
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