We modeled yellow-billed loon (Gavia adamsii) habitat preferences in a 23,500 km2 area of northern Alaska using intensive aerial surveys and landscape-scale habitat descriptors. Of the 757 lakes censused, yellow-billed loons occupied 15% and Pacific loons (G. pacifica) 42%. Lake area, depth, proportion of shoreline in aquatic vegetation, shoreline complexity, hydrological connectivity (stream present within 100 m or absent), and an area–connectivity interaction were positive, significant predictors of yellow-billed loon presence in a multivariate logistic regression model, but distance to nearest river or Beaufort Sea coast were not. Predicted yellow-billed loon presence was 13 and 4.7 times more likely on deep and medium lakes, respectively, than on shallow lakes that freeze to the bottom. On small lakes (