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Code to analyze Capture-Mark-Recapture data of San Francisco gartersnakes (Thamnophis sirtalis tetrataenia)

June 3, 2022

Code files

"growth_analysis.R"
-An R script to fit the von Bertalanffy growth model to growth data
from San Francisco gartersnakes. The von Bertalanffy growth model is fit using JAGS software (Plummer 2003), and is based on the model presented in Armstrong and Brooks (2013).

"survival_analysis.R"
-An R script to fit the robust-design Cormack-Jolly-Seber model to capture-mark-recapture data from San Francisco gartersnakes. The robust-design model is based on the model published by Riecke et al. (2018).