Code to analyze Capture-Mark-Recapture data of San Francisco gartersnakes (Thamnophis sirtalis tetrataenia)
June 3, 2022
Code files
"growth_analysis.R"
-An R script to fit the von Bertalanffy growth model to growth data
from San Francisco gartersnakes. The von Bertalanffy growth model is fit using JAGS software (Plummer 2003), and is based on the model presented in Armstrong and Brooks (2013).
"survival_analysis.R"
-An R script to fit the robust-design Cormack-Jolly-Seber model to capture-mark-recapture data from San Francisco gartersnakes. The robust-design model is based on the model published by Riecke et al. (2018).
Citation Information
| Publication Year | 2022 |
|---|---|
| Title | Code to analyze Capture-Mark-Recapture data of San Francisco gartersnakes (Thamnophis sirtalis tetrataenia) |
| DOI | 10.5066/P9700BBK |
| Authors | Jonathan P Rose, Richard Kim, Elliot J Schoenig, Patrick C Lien, Brian J Halstead |
| Product Type | Software Release |
| Record Source | USGS Asset Identifier Service (AIS) |
| USGS Organization | Western Ecological Research Center - Headquarters |
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