Jeffrey Bromaghin, Ph.D. (Former Employee)
Science and Products
Filter Total Items: 31
QFASAR: Quantitative fatty acid signature analysis with R QFASAR: Quantitative fatty acid signature analysis with R
Knowledge of predator diets provides essential insights into their ecology, yet diet estimation is challenging and remains an active area of research.Quantitative fatty acid signature analysis (QFASA) is a popular method of estimating diet composition that continues to be investigated and extended. However, software to implement QFASA has only recently become publicly available.I...
Authors
Jeffrey F. Bromaghin
Simultaneous estimation of diet composition and calibration coefficients with fatty acid signature data Simultaneous estimation of diet composition and calibration coefficients with fatty acid signature data
Knowledge of animal diets provides essential insights into their life history and ecology, although diet estimation is challenging and remains an active area of research. Quantitative fatty acid signature analysis (QFASA) has become a popular method of estimating diet composition, especially for marine species. A primary assumption of QFASA is that constants called calibration...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann, Karyn D. Rode
Detect and exploit hidden structure in fatty acid signature data Detect and exploit hidden structure in fatty acid signature data
Estimates of predator diet composition are essential to our understanding of their ecology. Although several methods of estimating diet are practiced, methods based on biomarkers have become increasingly common. Quantitative fatty acid signature analysis (QFASA) is a popular method that continues to be refined and extended. Quantitative fatty acid signature analysis is based on...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann
Habitat degradation affects the summer activity of polar bears Habitat degradation affects the summer activity of polar bears
Understanding behavioral responses of species to environmental change is critical to forecasting population-level effects. Although climate change is significantly impacting species’ distributions, few studies have examined associated changes in behavior. Polar bear (Ursus maritimus) subpopulations have varied in their near-term responses to sea ice decline. We examined behavioral...
Authors
Jasmine V. Ware, Karyn D. Rode, Jeffrey F. Bromaghin, David C. Douglas, Ryan H. Wilson, Eric V. Regehr, Steven C. Amstrup, George M. Durner, Anthony M. Pagano, Jay Olson, Charles T. Robbins, Heiko T Jansen
Forecasting the relative influence of environmental and anthropogenic stressors on polar bears Forecasting the relative influence of environmental and anthropogenic stressors on polar bears
Effective conservation planning requires understanding and ranking threats to wildlife populations. We developed a Bayesian network model to evaluate the relative influence of environmental and anthropogenic stressors, and their mitigation, on the persistence of polar bears (Ursus maritimus). Overall sea ice conditions, affected by rising global temperatures, were the most influential...
Authors
Todd C. Atwood, Bruce G. Marcot, David C. Douglas, Steven C. Amstrup, Karyn D. Rode, George M. Durner, Jeffrey F. Bromaghin
Should fatty acid signature proportions sum to 1 for diet estimation? Should fatty acid signature proportions sum to 1 for diet estimation?
Knowledge of predator diets, including how diets might change through time or differ among predators, provides essential insights into their ecology. Diet estimation therefore remains an active area of research within quantitative ecology. Quantitative fatty acid signature analysis (QFASA) is an increasingly common method of diet estimation. QFASA is based on a data library of prey...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann
Validation of mercury tip-switch and accelerometer activity sensors for identifying resting and active behavior in bears Validation of mercury tip-switch and accelerometer activity sensors for identifying resting and active behavior in bears
Activity sensors are often included in wildlife transmitters and can provide information on the behavior and activity patterns of animals remotely. However, interpreting activity-sensor data relative to animal behavior can be difficult if animals cannot be continuously observed. In this study, we examined the performance of a mercury tip-switch and a tri-axial accelerometer housed in...
Authors
Jasmine Ware, Karyn D. Rode, Anthony M. Pagano, Jeffrey F. Bromaghin, Charles T. Robbins, Joy Erlenbach, Shannon Jensen, Amy Cutting, Nicole Nicassio-Hiskey, Amy Hash, Megan A. Owen, Heiko Jansen
Simulating realistic predator signatures in quantitative fatty acid signature analysis Simulating realistic predator signatures in quantitative fatty acid signature analysis
Diet estimation is an important field within quantitative ecology, providing critical insights into many aspects of ecology and community dynamics. Quantitative fatty acid signature analysis (QFASA) is a prominent method of diet estimation, particularly for marine mammal and bird species. Investigators using QFASA commonly use computer simulation to evaluate statistical characteristics...
Authors
Jeffrey F. Bromaghin
Assessing the robustness of quantitative fatty acid signature analysis to assumption violations Assessing the robustness of quantitative fatty acid signature analysis to assumption violations
Knowledge of animal diets can provide important insights into life history and ecology, relationships among species in a community and potential response to ecosystem change or perturbation. Quantitative fatty acid signature analysis (QFASA) is a method of estimating diets from data on the composition, or signature, of fatty acids stored in adipose tissue. Given data on signatures of...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann, Karyn D. Rode
Diet of yellow-billed loons (Gavia adamsii) in Arctic lakes during the nesting season inferred from fatty acid analysis Diet of yellow-billed loons (Gavia adamsii) in Arctic lakes during the nesting season inferred from fatty acid analysis
Understanding the dietary habits of yellow-billed loons (Gavia adamsii) can give important insights into their ecology, however, studying the diet of loons is difficult when direct observation or specimen collection is impractical. We investigate the diet of yellow-billed loons nesting on the Arctic Coastal Plain of Alaska using quantitative fatty acid signature analysis. Tissue analysis...
Authors
T B Haynes, Joel A. Schmutz, Jeffrey F. Bromaghin, S J Iverson, V. M. Padula, A E Rosenberger
Polar bear population dynamics in the southern Beaufort Sea during a period of sea ice decline Polar bear population dynamics in the southern Beaufort Sea during a period of sea ice decline
In the southern Beaufort Sea of the United States and Canada, prior investigations have linked declines in summer sea ice to reduced physical condition, growth, and survival of polar bears (Ursus maritimus). Combined with projections of population decline due to continued climate warming and the ensuing loss of sea ice habitat, those findings contributed to the 2008 decision to list the...
Authors
Jeffrey F. Bromaghin, Trent L. McDonald, Ian Stirling, Andrew E. Derocher, Evan S. Richardson, Eric V. Regehr, David C. Douglas, George M. Durner, Todd C. Atwood, Steven C. Amstrup
Distance measures and optimization spaces in quantitative fatty acid signature analysis Distance measures and optimization spaces in quantitative fatty acid signature analysis
Quantitative fatty acid signature analysis has become an important method of diet estimation in ecology, especially marine ecology. Controlled feeding trials to validate the method and estimate the calibration coefficients necessary to account for differential metabolism of individual fatty acids have been conducted with several species from diverse taxa. However, research into potential
Authors
Jeffrey F. Bromaghin, Karyn D. Rode, Suzanne M. Budge, Gregory W. Thiemann
Science and Products
Filter Total Items: 31
QFASAR: Quantitative fatty acid signature analysis with R QFASAR: Quantitative fatty acid signature analysis with R
Knowledge of predator diets provides essential insights into their ecology, yet diet estimation is challenging and remains an active area of research.Quantitative fatty acid signature analysis (QFASA) is a popular method of estimating diet composition that continues to be investigated and extended. However, software to implement QFASA has only recently become publicly available.I...
Authors
Jeffrey F. Bromaghin
Simultaneous estimation of diet composition and calibration coefficients with fatty acid signature data Simultaneous estimation of diet composition and calibration coefficients with fatty acid signature data
Knowledge of animal diets provides essential insights into their life history and ecology, although diet estimation is challenging and remains an active area of research. Quantitative fatty acid signature analysis (QFASA) has become a popular method of estimating diet composition, especially for marine species. A primary assumption of QFASA is that constants called calibration...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann, Karyn D. Rode
Detect and exploit hidden structure in fatty acid signature data Detect and exploit hidden structure in fatty acid signature data
Estimates of predator diet composition are essential to our understanding of their ecology. Although several methods of estimating diet are practiced, methods based on biomarkers have become increasingly common. Quantitative fatty acid signature analysis (QFASA) is a popular method that continues to be refined and extended. Quantitative fatty acid signature analysis is based on...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann
Habitat degradation affects the summer activity of polar bears Habitat degradation affects the summer activity of polar bears
Understanding behavioral responses of species to environmental change is critical to forecasting population-level effects. Although climate change is significantly impacting species’ distributions, few studies have examined associated changes in behavior. Polar bear (Ursus maritimus) subpopulations have varied in their near-term responses to sea ice decline. We examined behavioral...
Authors
Jasmine V. Ware, Karyn D. Rode, Jeffrey F. Bromaghin, David C. Douglas, Ryan H. Wilson, Eric V. Regehr, Steven C. Amstrup, George M. Durner, Anthony M. Pagano, Jay Olson, Charles T. Robbins, Heiko T Jansen
Forecasting the relative influence of environmental and anthropogenic stressors on polar bears Forecasting the relative influence of environmental and anthropogenic stressors on polar bears
Effective conservation planning requires understanding and ranking threats to wildlife populations. We developed a Bayesian network model to evaluate the relative influence of environmental and anthropogenic stressors, and their mitigation, on the persistence of polar bears (Ursus maritimus). Overall sea ice conditions, affected by rising global temperatures, were the most influential...
Authors
Todd C. Atwood, Bruce G. Marcot, David C. Douglas, Steven C. Amstrup, Karyn D. Rode, George M. Durner, Jeffrey F. Bromaghin
Should fatty acid signature proportions sum to 1 for diet estimation? Should fatty acid signature proportions sum to 1 for diet estimation?
Knowledge of predator diets, including how diets might change through time or differ among predators, provides essential insights into their ecology. Diet estimation therefore remains an active area of research within quantitative ecology. Quantitative fatty acid signature analysis (QFASA) is an increasingly common method of diet estimation. QFASA is based on a data library of prey...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann
Validation of mercury tip-switch and accelerometer activity sensors for identifying resting and active behavior in bears Validation of mercury tip-switch and accelerometer activity sensors for identifying resting and active behavior in bears
Activity sensors are often included in wildlife transmitters and can provide information on the behavior and activity patterns of animals remotely. However, interpreting activity-sensor data relative to animal behavior can be difficult if animals cannot be continuously observed. In this study, we examined the performance of a mercury tip-switch and a tri-axial accelerometer housed in...
Authors
Jasmine Ware, Karyn D. Rode, Anthony M. Pagano, Jeffrey F. Bromaghin, Charles T. Robbins, Joy Erlenbach, Shannon Jensen, Amy Cutting, Nicole Nicassio-Hiskey, Amy Hash, Megan A. Owen, Heiko Jansen
Simulating realistic predator signatures in quantitative fatty acid signature analysis Simulating realistic predator signatures in quantitative fatty acid signature analysis
Diet estimation is an important field within quantitative ecology, providing critical insights into many aspects of ecology and community dynamics. Quantitative fatty acid signature analysis (QFASA) is a prominent method of diet estimation, particularly for marine mammal and bird species. Investigators using QFASA commonly use computer simulation to evaluate statistical characteristics...
Authors
Jeffrey F. Bromaghin
Assessing the robustness of quantitative fatty acid signature analysis to assumption violations Assessing the robustness of quantitative fatty acid signature analysis to assumption violations
Knowledge of animal diets can provide important insights into life history and ecology, relationships among species in a community and potential response to ecosystem change or perturbation. Quantitative fatty acid signature analysis (QFASA) is a method of estimating diets from data on the composition, or signature, of fatty acids stored in adipose tissue. Given data on signatures of...
Authors
Jeffrey F. Bromaghin, Suzanne M. Budge, Gregory W. Thiemann, Karyn D. Rode
Diet of yellow-billed loons (Gavia adamsii) in Arctic lakes during the nesting season inferred from fatty acid analysis Diet of yellow-billed loons (Gavia adamsii) in Arctic lakes during the nesting season inferred from fatty acid analysis
Understanding the dietary habits of yellow-billed loons (Gavia adamsii) can give important insights into their ecology, however, studying the diet of loons is difficult when direct observation or specimen collection is impractical. We investigate the diet of yellow-billed loons nesting on the Arctic Coastal Plain of Alaska using quantitative fatty acid signature analysis. Tissue analysis...
Authors
T B Haynes, Joel A. Schmutz, Jeffrey F. Bromaghin, S J Iverson, V. M. Padula, A E Rosenberger
Polar bear population dynamics in the southern Beaufort Sea during a period of sea ice decline Polar bear population dynamics in the southern Beaufort Sea during a period of sea ice decline
In the southern Beaufort Sea of the United States and Canada, prior investigations have linked declines in summer sea ice to reduced physical condition, growth, and survival of polar bears (Ursus maritimus). Combined with projections of population decline due to continued climate warming and the ensuing loss of sea ice habitat, those findings contributed to the 2008 decision to list the...
Authors
Jeffrey F. Bromaghin, Trent L. McDonald, Ian Stirling, Andrew E. Derocher, Evan S. Richardson, Eric V. Regehr, David C. Douglas, George M. Durner, Todd C. Atwood, Steven C. Amstrup
Distance measures and optimization spaces in quantitative fatty acid signature analysis Distance measures and optimization spaces in quantitative fatty acid signature analysis
Quantitative fatty acid signature analysis has become an important method of diet estimation in ecology, especially marine ecology. Controlled feeding trials to validate the method and estimate the calibration coefficients necessary to account for differential metabolism of individual fatty acids have been conducted with several species from diverse taxa. However, research into potential
Authors
Jeffrey F. Bromaghin, Karyn D. Rode, Suzanne M. Budge, Gregory W. Thiemann
*Disclaimer: Listing outside positions with professional scientific organizations on this Staff Profile are for informational purposes only and do not constitute an endorsement of those professional scientific organizations or their activities by the USGS, Department of the Interior, or U.S. Government