Russell Perry, Ph.D.
Russell is a Research Fish Biologist at the Columbia River Research Laboratory.
Science and Products
Filter Total Items: 128
Diel activity patterns of juvenile late fall-run Chinook salmon with implications for operation of a gated water diversion in the Sacramento–San Joaquin River Delta
In the Sacramento-San Joaquin River Delta, California, tidal forces that reverse river flows increase the proportion of water and juvenile late fall-run Chinook salmon diverted into a network of channels that were constructed to support agriculture and human consumption. This area is known as the interior delta, and it has been associated with poor fish survival. Under the rationale that the fish
Authors
John M. Plumb, Noah S. Adams, Russell W. Perry, Christopher Holbrook, Jason G. Romine, Aaron R. Blake, Jon R. Burau
Using a laboratory-based growth model to estimate mass- and temperature-dependent growth parameters across populations of juvenile Chinook Salmon
To estimate the parameters that govern mass- and temperature-dependent growth, we conducted a meta-analysis of existing growth data from juvenile Chinook Salmon Oncorhynchus tshawytscha that were fed an ad libitum ration of a pelleted diet. Although the growth of juvenile Chinook Salmon has been well studied, research has focused on a single population, a narrow range of fish sizes, or a narrow ra
Authors
Russell W. Perry, John M. Plumb, Charles Huntington
Evaluation of stream flow effects on smolt survival in the Yakima River Basin, Washington, 2012-2014
The influence of stream flow on survival of emigrating juvenile (smolts) Pacific salmon Oncorhynchus spp. and steelhead trout O. mykiss is of key management interest. However, few studies have quantified flow effects on smolt migration survival, and available information does not indicate a consistent flow-survival relationship within the typical range of flows under
management control. It is hyp
Authors
Ian Courter, Tommy Garrison, Tobias J. Kock, Russell W. Perry
Performance of a surface bypass structure to enhance juvenile steelhead passage and survival at Lower Granite Dam, Washington
An integral part of efforts to recover stocks of Pacific salmon Oncorhynchus spp. and steelhead O. mykiss in Pacific Northwest rivers is to increase passage efficacy and survival of juveniles past hydroelectric dams. As part of this effort, we evaluated the efficacy of a prototype surface bypass structure, the removable spillway weir (RSW), installed in a spillbay at Lower Granite Dam, Washington,
Authors
Noah S. Adams, John M. Plumb, Russell W. Perry, Dennis W. Rondorf
Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River fall Chinook salmon ESU, 1/1/2012 – 12/31/2013: Annual report, 1991-029-00
The portion of the Snake River fall Chinook Salmon Oncorhynchus tshawytscha ESU that spawns upstream of Lower Granite Dam transitioned from low to high abundance during 1992–2014 in association with U.S. Endangered Species Act recovery efforts and other Federally mandated actions. This annual report focuses on (1) numeric and habitat use responses by natural- and hatchery-origin spawners, (2) phen
Authors
William P. Connor, Frank Mullins, Kenneth F. Tiffan, Russell W. Perry, John M. Erhardt, Scott J. St. John, Brad K. Bickford, Tobyn N. Rhodes
Using cure models for analyzing the influence of pathogens on salmon survival
Parasites and pathogens influence the size and stability of wildlife populations, yet many population models ignore the population-level effects of pathogens. Standard survival analysis methods (e.g., accelerated failure time models) are used to assess how survival rates are influenced by disease. However, they assume that each individual is equally susceptible and will eventually experience the e
Authors
Adam R Ray, Russell W. Perry, Nicholas A. Som, Jerri L Bartholomew
Correlation of gene expression and contaminat concentrations in wild largescale suckers: a field-based study
Toxic compounds such as organochlorine pesticides (OCs), polychlorinated biphenyls (PCBs), and polybrominated diphenyl ether flame retardants (PBDEs) have been detected in fish, birds, and aquatic mammals that live in the Columbia River or use food resources from within the river. We developed a custom microarray for largescale suckers (Catostomus macrocheilus) and used it to investigate the molec
Authors
Helena E. Christiansen, Alvine C. Mehinto, Fahong Yu, Russell W. Perry, Nancy D. Denslow, Alec G. Maule, Matthew G. Mesa
Using broad landscape level features to predict redd densities of steelhead trout (Oncorhynchus mykiss) and Chinook Salmon (Oncorhynchus tshawytscha) in the Methow River watershed, Washington
We used broad-scale landscape feature variables to model redd densities of spring Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) in the Methow River watershed. Redd densities were estimated from redd counts conducted from 2005 to 2007 and 2009 for steelhead trout and 2005 to 2009 for spring Chinook salmon. These densities were modeled using generalized linear m
Authors
Jason G. Romine, Russell W. Perry, Patrick J. Connolly
Theoretical life history responses of juvenile Oncorhynchus mykiss to changes in food availability using a dynamic state-dependent approach
Marine subsidies can play an important role in the growth, survival, and migratory behavior of rearing juvenile salmonids. Availability of high-energy, marine-derived food sources during critical decision windows may influence the timing of emigration or the decision to forego emigration completely and remain in the freshwater environment. Increasing growth and growth rate during these decision wi
Authors
Jason G. Romine, Joseph R. Benjamin, Russell W. Perry, Lynne Casal, Patrick J. Connolly, Sally S. Sauter
The Regional Salmon Outmigration Study--survival and migration routing of juvenile Chinook salmon in the Sacramento-San Joaquin River Delta during the winter of 2008-09
Juvenile Chinook salmon (Oncorhynchus tshawytscha) emigrating from natal tributaries of the Sacramento River may use a number of migration routes to navigate the Sacramento-San Joaquin River Delta (hereafter called “the Delta”), each of which may influence their probability of surviving. We applied a mark-recapture model to data from acoustically tagged juvenile late fall-run Chinook salmon that m
Authors
Jason G. Romine, Russell W. Perry, Scott J. Brewer, Noah S. Adams, Theresa L. Liedtke, Aaron R. Blake, Jon R. Burau
Comparing effects of transmitters within and among populations: application to swimming performance of juvenile Chinook salmon
The sensitivity of fish to a transmitter depends on factors such as environmental conditions, fish morphology, life stage, rearing history, and tag design. However, synthesizing general trends across studies is difficult because each study focuses on a particular performance measure, species, life stage, and transmitter model. These differences motivated us to develop simple metrics that allow eff
Authors
Russell W. Perry, John M. Plumb, Scott D. Fielding, Noah S. Adams, Dennis W. Rondorf
Adjusting survival estimates for premature transmitter failure: A case study from the Sacramento-San Joaquin Delta
In telemetry studies, premature tag failure causes negative bias in fish survival estimates because tag failure is interpreted as fish mortality. We used mark-recapture modeling to adjust estimates of fish survival for a previous study where premature tag failure was documented. High rates of tag failure occurred during the Vernalis Adaptive Management Plan’s (VAMP) 2008 study to estimate survival
Authors
Christopher M. Holbrook, Russell W. Perry, Patricia L. Brandes, Noah S. Adams
Non-USGS Publications**
Perry, R.W., J.R. Skalski, P.L. Brandes, P.T. Sandstrom, A.P. Klimley, A. Ammann, and B. MacFarlane. 2010. Estimating survival and migration route probabilities of juvenile Chinook salmon in the Sacramento-San Joaquin River Delta. N. Am. J. Fish. Manage. 30(1): 142-156. DOI: 10.1577/MO8-200.1.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Science and Products
Filter Total Items: 128
Diel activity patterns of juvenile late fall-run Chinook salmon with implications for operation of a gated water diversion in the Sacramento–San Joaquin River Delta
In the Sacramento-San Joaquin River Delta, California, tidal forces that reverse river flows increase the proportion of water and juvenile late fall-run Chinook salmon diverted into a network of channels that were constructed to support agriculture and human consumption. This area is known as the interior delta, and it has been associated with poor fish survival. Under the rationale that the fish
Authors
John M. Plumb, Noah S. Adams, Russell W. Perry, Christopher Holbrook, Jason G. Romine, Aaron R. Blake, Jon R. Burau
Using a laboratory-based growth model to estimate mass- and temperature-dependent growth parameters across populations of juvenile Chinook Salmon
To estimate the parameters that govern mass- and temperature-dependent growth, we conducted a meta-analysis of existing growth data from juvenile Chinook Salmon Oncorhynchus tshawytscha that were fed an ad libitum ration of a pelleted diet. Although the growth of juvenile Chinook Salmon has been well studied, research has focused on a single population, a narrow range of fish sizes, or a narrow ra
Authors
Russell W. Perry, John M. Plumb, Charles Huntington
Evaluation of stream flow effects on smolt survival in the Yakima River Basin, Washington, 2012-2014
The influence of stream flow on survival of emigrating juvenile (smolts) Pacific salmon Oncorhynchus spp. and steelhead trout O. mykiss is of key management interest. However, few studies have quantified flow effects on smolt migration survival, and available information does not indicate a consistent flow-survival relationship within the typical range of flows under
management control. It is hyp
Authors
Ian Courter, Tommy Garrison, Tobias J. Kock, Russell W. Perry
Performance of a surface bypass structure to enhance juvenile steelhead passage and survival at Lower Granite Dam, Washington
An integral part of efforts to recover stocks of Pacific salmon Oncorhynchus spp. and steelhead O. mykiss in Pacific Northwest rivers is to increase passage efficacy and survival of juveniles past hydroelectric dams. As part of this effort, we evaluated the efficacy of a prototype surface bypass structure, the removable spillway weir (RSW), installed in a spillbay at Lower Granite Dam, Washington,
Authors
Noah S. Adams, John M. Plumb, Russell W. Perry, Dennis W. Rondorf
Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River fall Chinook salmon ESU, 1/1/2012 – 12/31/2013: Annual report, 1991-029-00
The portion of the Snake River fall Chinook Salmon Oncorhynchus tshawytscha ESU that spawns upstream of Lower Granite Dam transitioned from low to high abundance during 1992–2014 in association with U.S. Endangered Species Act recovery efforts and other Federally mandated actions. This annual report focuses on (1) numeric and habitat use responses by natural- and hatchery-origin spawners, (2) phen
Authors
William P. Connor, Frank Mullins, Kenneth F. Tiffan, Russell W. Perry, John M. Erhardt, Scott J. St. John, Brad K. Bickford, Tobyn N. Rhodes
Using cure models for analyzing the influence of pathogens on salmon survival
Parasites and pathogens influence the size and stability of wildlife populations, yet many population models ignore the population-level effects of pathogens. Standard survival analysis methods (e.g., accelerated failure time models) are used to assess how survival rates are influenced by disease. However, they assume that each individual is equally susceptible and will eventually experience the e
Authors
Adam R Ray, Russell W. Perry, Nicholas A. Som, Jerri L Bartholomew
Correlation of gene expression and contaminat concentrations in wild largescale suckers: a field-based study
Toxic compounds such as organochlorine pesticides (OCs), polychlorinated biphenyls (PCBs), and polybrominated diphenyl ether flame retardants (PBDEs) have been detected in fish, birds, and aquatic mammals that live in the Columbia River or use food resources from within the river. We developed a custom microarray for largescale suckers (Catostomus macrocheilus) and used it to investigate the molec
Authors
Helena E. Christiansen, Alvine C. Mehinto, Fahong Yu, Russell W. Perry, Nancy D. Denslow, Alec G. Maule, Matthew G. Mesa
Using broad landscape level features to predict redd densities of steelhead trout (Oncorhynchus mykiss) and Chinook Salmon (Oncorhynchus tshawytscha) in the Methow River watershed, Washington
We used broad-scale landscape feature variables to model redd densities of spring Chinook salmon (Oncorhynchus tshawytscha) and steelhead trout (Oncorhynchus mykiss) in the Methow River watershed. Redd densities were estimated from redd counts conducted from 2005 to 2007 and 2009 for steelhead trout and 2005 to 2009 for spring Chinook salmon. These densities were modeled using generalized linear m
Authors
Jason G. Romine, Russell W. Perry, Patrick J. Connolly
Theoretical life history responses of juvenile Oncorhynchus mykiss to changes in food availability using a dynamic state-dependent approach
Marine subsidies can play an important role in the growth, survival, and migratory behavior of rearing juvenile salmonids. Availability of high-energy, marine-derived food sources during critical decision windows may influence the timing of emigration or the decision to forego emigration completely and remain in the freshwater environment. Increasing growth and growth rate during these decision wi
Authors
Jason G. Romine, Joseph R. Benjamin, Russell W. Perry, Lynne Casal, Patrick J. Connolly, Sally S. Sauter
The Regional Salmon Outmigration Study--survival and migration routing of juvenile Chinook salmon in the Sacramento-San Joaquin River Delta during the winter of 2008-09
Juvenile Chinook salmon (Oncorhynchus tshawytscha) emigrating from natal tributaries of the Sacramento River may use a number of migration routes to navigate the Sacramento-San Joaquin River Delta (hereafter called “the Delta”), each of which may influence their probability of surviving. We applied a mark-recapture model to data from acoustically tagged juvenile late fall-run Chinook salmon that m
Authors
Jason G. Romine, Russell W. Perry, Scott J. Brewer, Noah S. Adams, Theresa L. Liedtke, Aaron R. Blake, Jon R. Burau
Comparing effects of transmitters within and among populations: application to swimming performance of juvenile Chinook salmon
The sensitivity of fish to a transmitter depends on factors such as environmental conditions, fish morphology, life stage, rearing history, and tag design. However, synthesizing general trends across studies is difficult because each study focuses on a particular performance measure, species, life stage, and transmitter model. These differences motivated us to develop simple metrics that allow eff
Authors
Russell W. Perry, John M. Plumb, Scott D. Fielding, Noah S. Adams, Dennis W. Rondorf
Adjusting survival estimates for premature transmitter failure: A case study from the Sacramento-San Joaquin Delta
In telemetry studies, premature tag failure causes negative bias in fish survival estimates because tag failure is interpreted as fish mortality. We used mark-recapture modeling to adjust estimates of fish survival for a previous study where premature tag failure was documented. High rates of tag failure occurred during the Vernalis Adaptive Management Plan’s (VAMP) 2008 study to estimate survival
Authors
Christopher M. Holbrook, Russell W. Perry, Patricia L. Brandes, Noah S. Adams
Non-USGS Publications**
Perry, R.W., J.R. Skalski, P.L. Brandes, P.T. Sandstrom, A.P. Klimley, A. Ammann, and B. MacFarlane. 2010. Estimating survival and migration route probabilities of juvenile Chinook salmon in the Sacramento-San Joaquin River Delta. N. Am. J. Fish. Manage. 30(1): 142-156. DOI: 10.1577/MO8-200.1.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.