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Publications

This is a list of publications written by Patuxent employees since Patuxent opened in 1939.  To search for Patuxent's publications by author or title, please click below to go to the USGS Publication Warehouse.

Filter Total Items: 8128

Linking animals aloft with the terrestrial landscape Linking animals aloft with the terrestrial landscape

Despite using the aerosphere for many facets of their life, most flying animals (i.e., birds, bats, some insects) are still bound to terrestrial habitats for resting, feeding, and reproduction. Comprehensive broad-scale observations by weather surveillance radars of animals as they leave terrestrial habitats for migration or feeding flights can be used to map their terrestrial...
Authors
Jeffrey J. Buler, Wylie C. Barrow, Matthew Boone, Deanna K. Dawson, Robert H. Diehl, Frank R. Moore, Lori A. Randall, Timothy Schreckengost, Jaclyn A. Smolinsky

Occupancy in community-level studies Occupancy in community-level studies

Another type of multi-species studies, are those focused on community-level metrics such as species richness. In this chapter we detail how some of the single-species occupancy models described in earlier chapters have been applied, or extended, for use in such studies, while accounting for imperfect detection. We highlight how Bayesian methods using MCMC are particularly useful in such...
Authors
Darryl I. MacKenzie, James D. Nichols, Andy Royle, Kenneth H. Pollock, Larissa L. Bailey, James E. Hines

The aerosphere as a network connector of organisms and their diseases The aerosphere as a network connector of organisms and their diseases

Aeroecological processes, especially powered flight of animals, can rapidly connect biological communities across the globe. This can have profound consequences for evolutionary diversification, energy and nutrient transfers, and the spread of infectious diseases. The latter is of particular consequence for human populations, since migratory birds are known to host diseases which have a...
Authors
Jeremy D. Ross, Eli S. Bridge, Diann J. Prosser, John Y. Takekawa

Skeletal injuries in small mammals: a multispecies assessment of prevalence and location Skeletal injuries in small mammals: a multispecies assessment of prevalence and location

Wild mammals are known to survive injuries that result in skeletal abnormalities. Quantifying and comparing skeletal injuries among species can provide insight into the factors that cause skeletal injuries and enable survival following an injury. We documented the prevalence and location of structural bone abnormalities in a community of 7 small mammal species inhabiting the White...
Authors
Ryan B. Stephens, Christopher B. Burke, Neal Woodman, Lily B. Poland, Rebecca J. Rowe

Tributyltin: Advancing the science on assessing endocrine disruption with an unconventional endocrine-disrupting compound Tributyltin: Advancing the science on assessing endocrine disruption with an unconventional endocrine-disrupting compound

Tributyltin (TBT) has been recognized as an endocrine disrupting chemical (EDC) for several decades. However, only in the last decade, was its primary endocrine mechanism of action (MeOA) elucidated—interactions with the nuclear retinoid-X receptor (RXR), peroxisome proliferator-activated receptor γ (PPARγ), and their heterodimers. This molecular initiating event (MIE) alters a range of
Authors
Laurent Lagadic, Ioanna Katsiadaki, Ronald C. Biever, Patrick Guiney, Natalie Karouna-Renier, Tamar Schwarz, James P. Meador

Spatial organization of the gastrointestinal microbiota in urban Canada geese Spatial organization of the gastrointestinal microbiota in urban Canada geese

Recent reviews identified the reliance on fecal or cloacal samples as a significant limitation hindering our understanding of the avian gastrointestinal (gut) microbiota and its function. We investigated the microbiota of the esophagus, duodenum, cecum, and colon of a wild urban population of Canada goose (Branta canadensis). From a population sample of 30 individuals, we sequenced the...
Authors
Sergei V. Drovetski, Michael O’Mahoney, Emma J. Ransome, Kenan O. Matterson, Haw Chuan Lim, Terry Chesser, Gary R. Graves

Spatial capture–recapture with partial identity: An application to camera traps Spatial capture–recapture with partial identity: An application to camera traps

Camera trapping surveys frequently capture individuals whose identity is only known from a single flank. The most widely used methods for incorporating these partial identity individuals into density analyses discard some of the partial identity capture histories, reducing precision, and, while not previously recognized, introducing bias. Here, we present the spatial partial identity...
Authors
Ben C. Augustine, J. Andrew Royle, Marcella J. Kelly, Christopher B. Satter, Robert S. Alonso, Erin E. Boydston, Kevin R. Crooks

Environmental contaminants of health-care origin: Exposure and potential effects in wildlife Environmental contaminants of health-care origin: Exposure and potential effects in wildlife

A diverse range of fauna could be exposed to active pharmaceutical ingredients (APIs) via diet, dermal absorption or bioconcentration. Low level exposures of free-ranging wildlife to APIs has only been demonstrated for a few pathways (e.g., ingestion of fish in estuaries by piscivorous birds), and many remain hypothetical (e.g., ingestion of invertebrates in sludge amended fields by...
Authors
Thomas Bean, Barnett A. Rattner

Anomalous bioaccumulation of lead in the earthworm Eisenoides lonnbergi (Michaelsen) Anomalous bioaccumulation of lead in the earthworm Eisenoides lonnbergi (Michaelsen)

Lead concentrations in soil organisms are usually well below those in the associated soil and tend to decrease with each higher trophic level in a food chain. Earthworms of the species Eisenoides lonnbergi provide an exception to this observation, accumulating very high concentrations of lead from acidic soils. Earthworms belonging to this species were collected from strongly to...
Authors
W. Nelson Beyer, Eton E. Codling, Michael A. Rutzke

Molecular systematics and biodiversity of the Cryptotis mexicanus group (Eulipotyphla: Soricidae): two new species from Honduras supported Molecular systematics and biodiversity of the Cryptotis mexicanus group (Eulipotyphla: Soricidae): two new species from Honduras supported

Small-eared shrews of the genus Cryptotis (Mammalia: Eulipotyphla: Soricidae) are widespread in the northern Neotropics. Systematic studies of these shrews over the past two decades have revealed previously undocumented morphological and species diversity, resulting in a quadrupling of the number of recognized species. Unfortunately, a small proportion of the species in the genus have...
Authors
Amy B. Baird, Timothy J. McCarthy, Robert G. Trujillo, Yuan Yuan Kang, Mehdi Esmaeiliyan, Joselyn Valdez, Neal Woodman, John W. Bickham

Species distribution modeling in regions of high need and limited data: waterfowl of China Species distribution modeling in regions of high need and limited data: waterfowl of China

Background A number of conservation and societal issues require understanding how species are distributed on the landscape, yet ecologists are often faced with a lack of data to develop models at the resolution and extent desired, resulting in inefficient use of conservation resources. Such a situation presented itself in our attempt to develop waterfowl distribution models as part of a...
Authors
Diann J. Prosser, Changqing Ding, R. Michael Erwin, Taej Mundkur, Jeffery D. Sullivan, Erle C. Ellis

Artificial light at night confounds broad-scale habitat use by migrating birds Artificial light at night confounds broad-scale habitat use by migrating birds

With many of the world's migratory bird populations in alarming decline, broad-scale assessments of responses to migratory hazards may prove crucial to successful conservation efforts. Most birds migrate at night through increasingly light-polluted skies. Bright light sources can attract airborne migrants and lead to collisions with structures, but might also influence selection of...
Authors
James D. McLaren, Jeffrey J. Buler, Tim Schreckengost, Jaclyn A. Smolinsky, Matthew Boone, E. Emiel van Loon, Deanna K. Dawson, Eric L. Walters
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