Microsatellite genotype scores for a contemporary, range-wide sample of Santa Ana sucker in southern California
December 7, 2017
These data consist of microsatellite genotype scores for all samples of Santa Ana sucker (Catostomus santaanae) used in the study. Scores represent the allele calls for each microsatellite locus (i.e. DNA fragment length containing the microsatellite repeats), with each locus containing two scores representing the two allele copies detected. Included are five tables: Full dataset (includes genotypes from all samples), Santa Clara River samples only (includes genotypes only from samples collected in the Santa Clara River), Convert File format key (explains the data file format), Population identifiers (translates the numerical population identifiers to actual collecting sites), CASA sampling points (one coordinate given for each general collection site).
Whole specimens are accessioned at the Los Angeles County Museum of Natural History (catalog numbers 58475-58481).
GenBank accession numbers for the DNA sequences are: MF918422 - MF918481.
These data support the following publication:
Richmond, J.Q., Backlin, A.R., Galst‐Cavalcante, C., O'Brien, J.W. and Fisher, R.N., Loss of dendritic connectivity in southern California's urban riverscape facilitates decline of an endemic freshwater fish. Molecular Ecology.
Whole specimens are accessioned at the Los Angeles County Museum of Natural History (catalog numbers 58475-58481).
GenBank accession numbers for the DNA sequences are: MF918422 - MF918481.
These data support the following publication:
Richmond, J.Q., Backlin, A.R., Galst‐Cavalcante, C., O'Brien, J.W. and Fisher, R.N., Loss of dendritic connectivity in southern California's urban riverscape facilitates decline of an endemic freshwater fish. Molecular Ecology.
Citation Information
| Publication Year | 2017 |
|---|---|
| Title | Microsatellite genotype scores for a contemporary, range-wide sample of Santa Ana sucker in southern California |
| DOI | 10.5066/F7Z31XMZ |
| Authors | Jonathan Q Richmond, Adam R Backlin, Robert N Fisher |
| Product Type | Data Release |
| Record Source | USGS Asset Identifier Service (AIS) |
| USGS Organization | Western Ecological Research Center - Headquarters |
| Rights | This work is marked with CC0 1.0 Universal |
Related
Loss of dendritic connectivity in southern California's urban riverscape facilitates decline of an endemic freshwater fish
Life history adaptations and spatial configuration of metapopulation networks allow certain species to persist in extreme fluctuating environments, yet long-term stability within these systems relies on the maintenance of linkage habitat. Degradation of such linkages in urban riverscapes can disrupt this dynamic in aquatic species, leading to increased extinction debt in local...
Authors
Jonathan Q. Richmond, Adam R. Backlin, Carey Galst-Cavalcante, John W. O'Brien, Robert N. Fisher
Related
Loss of dendritic connectivity in southern California's urban riverscape facilitates decline of an endemic freshwater fish
Life history adaptations and spatial configuration of metapopulation networks allow certain species to persist in extreme fluctuating environments, yet long-term stability within these systems relies on the maintenance of linkage habitat. Degradation of such linkages in urban riverscapes can disrupt this dynamic in aquatic species, leading to increased extinction debt in local...
Authors
Jonathan Q. Richmond, Adam R. Backlin, Carey Galst-Cavalcante, John W. O'Brien, Robert N. Fisher