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Software

An official USGS software project is code reviewed and approved at the bureau-level for distribution.

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Risk Modeling at the Wild Waterfowl-Domestic Poultry Interface - Interactive Dashboard Risk Modeling at the Wild Waterfowl-Domestic Poultry Interface - Interactive Dashboard

The aim of this software is to share results from Prosser et al. (2024) by allowing users to explore different spatial layers over each week of the year via an interactive mapping interface. This web application serves as a decision support tool for decision makers related to transmission risk during the ongoing highly pathogenic avian influenza outbreak. This software provides a user...

ModelMuse 5.3, Software Release ModelMuse 5.3, Software Release

ModelMuse version 5.3 adds the ability to import existing MODFLOW 6 models with some limitations. Other changes include 1. the ability to use formulas to activate or deactivate specified head, specified concentration, and mass source boundaries, 2. the ability to use formulas in the scale factors of dynamic boundaries, 3. support for the AUXMULTNAME option in MODFLOW 6, and 4. the...

Software code for simulating elk and chronic wasting disease dynamics on the National Elk Refuge (version 0.1.0) Software code for simulating elk and chronic wasting disease dynamics on the National Elk Refuge (version 0.1.0)

This software release contains the code necessary to run the chronic wasting disease (CWD) and elk population models used to support the U.S. Fish and Wildlife Service decision on whether to continue to continue supplemental feeding of elk on the National Elk Refuge (NER). The models allow for five different management alternatives: continued feeding, reduced feeding, increased hunting...

Agisoft Metashape Alignment Helper Version 1.0 Agisoft Metashape Alignment Helper Version 1.0

The Alignment Helper is a GUI tool designed to be embedded in the Agisoft Metashape application. The Alignment Helper was written in support of a diver-based structure-from-motion data processing workflow and was built to facilitate proper alignment of Metashape models with the local grid coordinate system.

Code for the effect of myiasis on Eastern Box Turtle (Terrapene carolina carolina) body condition, movement, and habitat use at Camp Edwards Code for the effect of myiasis on Eastern Box Turtle (Terrapene carolina carolina) body condition, movement, and habitat use at Camp Edwards

This software release contains one R script that reproduces all of the statistical analysis with objectives to (2) determine if myiasis affects Eastern Box Turtle body condition, (3) determine if myiasis affects Eastern Box Turtle shell temperature, (4) determine if myiasis affects Eastern Box Turtle habitat use, and (5) determine if myiasis affected turtles move shorter distances than...

A Long Short Term Memory model for predicting daily lake ice cover changes in the Northern Hemisphere A Long Short Term Memory model for predicting daily lake ice cover changes in the Northern Hemisphere

This software release includes the python scripts and jupyter notebooks of collecting remote-sensed lake ice cover data, training & validating a lake ice model and visualizing the model output.
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