Software

This repository contains an example application of the `Meta-IPM` Python package (https://doi.org/10.5066/P9PW673G). The specific application focuses on the Illinois River using existing public data.

This repository contains code to cluster a sample of Mussels based up their metabolic levels via Non-Metric Multidimensional Scaling (NMDS) and distance based-Redundancy Analysis (db-RDA). Mussel sample is broken down and examined by catch location, sex, and species. The code for this project assumes the reader is familiar with R and clustering techniques.

Climate data allow people to examine species distributions and possible distributions. This script takes ERA5-Land climate estimates (https://www.ecmwf.int/en/forecasts/datasets/reanalysis-datasets/era5) for precipitation and lake temperature and processes them to create summary climate layers for use with biological organisms in lakes. This code could be modified to use a different...

This repository contains analysis codes to interpolate missing data from the Upper Mississippi River LTRM dataset.

This software release includes code to conduct analyses presented in the manuscript titled: A hierarchical modeling framework for estimating individual- and population-level reproductive success from movement data

SeaLog is a robust data-logging application designed to collect at-sea data of marine birds and mammals. This software was developed collaboratively with the U.S. Geological Survey, the National Park Service, the U.S. Fish and Wildlife Service, and ABR, Inc. SeaLog is Windows 10 compatible, is highly customizable, and provides user designed maps to allow visual feedback of observations.