Software

We developed the hyperparameter optimization and predictor selection (HOPS) software to optimize hyperparameters and predictor selection while limiting correlation among the selected predictors for machine learning models. Including correlated predictors in machine learning models can distort model estimation and prediction and introduce bias in predictor importance estimates. The HOPS...

This model combines resighting data from Whimbrels breeding at Kanuti National Wildlife Refuge with known-fate data and pseudo-resighting history from Whimbrels breeding at the Colville River Delta ('colv'). All Whimbrels in the study (n = 76) were marked with a USGS metal band and a uniquely coded engraved leg flag. In addition, 15 Whimbrels at Kanuti were equipped with surgically...

This repository contains all of the scripts to reproduce the analyses, figures, and tables associated with the manuscript Glorioso et al. in review. The scripts are organized into folders, and the folders are numbered in the order in which they should be executed. Briefly, there are six folders that do the following: (1) format the data, (2) fit the model, (3) run the population...

A collection of ArcGIS python toolboxes and plugins used by the Planetary Geologic Mapping program. They are designed to work with ArcPro 2.0 and ArcMap 10.0 or higher.

Code for implementation of the Dynamic Surface Water Extent algorithm in Google Earth Engine. Multiple scripts allow the creation of single-scene or composited Dynamic Surface Water Extent (DSWE) images from Landsat and MODIS data. All code is written for use in the JavaScript API.

This software release contains several R scripts that generate epidemic projections of SARS-CoV-2 in white tailed deer populations using a Susceptible-Infected-Recovered-Susceptible (SIRS) modeling framework. We provide a workflow of vignettes used in Rosenblatt et al. In Prep and Cook et al. In Prep. Users are able to specify transmission parameters for human-deer and deer-deer...