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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5125

InFish: A professional network to promote global conservation and responsible use of inland fish InFish: A professional network to promote global conservation and responsible use of inland fish

Inland fishes and fisheries make substantial contributions to individuals, society, and the environment in a changing global landscape that includes climate, water allocations, and societal changes. However, current limitations to valuing the services provided by inland fish and their fisheries often leaves them out of key decision‐making discussions. InFish is a voluntary professional...
Authors
Abigail J Lynch, Devin M. Bartley, Beard, David Bunnell, Steve J. Cooke, Ian. G. Cowx, Simon Funge-Smith, Craig P. Paukert, Mark W. Rogers, William W. Taylor

Investigating population genetics of invasive rainbow smelt in the Great Lakes Region Investigating population genetics of invasive rainbow smelt in the Great Lakes Region

Increasing our understanding of invasive species is important because of the negative impacts they can have on the economies and ecosystems of invaded regions. There is growing interest in how environmental variability (e.g. temperature) and stochastic invasion events (e.g. founder effects) affect the genetic composition of populations of invasive species. Rainbow smelt (Osmerus mordax)...
Authors
Jamie A. Dobosenski, Jared L. Strasburg, Wesley Larson, Thomas R. Hrabik

Using ultrasonic acoustics to detect cryptic flying squirrels: Effects of season and habitat suitability Using ultrasonic acoustics to detect cryptic flying squirrels: Effects of season and habitat suitability

New technologies allow for more efficient and effective monitoring of rare or elusive species. However, standardizing protocol to ensure high detection rates is important prior to widespread use of a new technique. The use of ultrasonic acoustic detectors to survey for flying squirrels (Glaucomys spp.) is a novel method that is more efficient than traditional methods. However, certain
Authors
Corinne A. Diggins, L. Michelle Gilley, Christine A. Kelly, W. Mark Ford

Can genetic assignment tests provide insight on the influence of captive egression on epizootiology of chronic wasting disease? Can genetic assignment tests provide insight on the influence of captive egression on epizootiology of chronic wasting disease?

Identifying the sources of ongoing and novel disease outbreaks is critical for understanding the diffusion of epizootic diseases. Identifying infection sources is difficult when few physical differences separate individuals with different origins. Genetic assignment procedures show great promise for assessing transmission dynamics in such situations. Here, we use genetic assignment tests...
Authors
William L. Miller, W. David Walter

Bark beetle-affected forests provide elk only a marginal refuge from hunters Bark beetle-affected forests provide elk only a marginal refuge from hunters

For nearly 2 decades, the forests of the Rocky Mountains in the United States experienced a bark-beetle (Dendoctronus ponderosae) epidemic. The number of dead and falling trees from this epidemic likely will affect how elk (Cervus canadensis) and hunters use the forest and their interactions. Downed trees potentially create a component of refuge habitat that could affect the...
Authors
Bryan G. Lamont, Matthew J. Kauffman, Jerod A. Merkle, Tony W. Mong, Matthew M. Hayes, Kevin L. Monteith

Metabolic rate is negatively linked to adult survival but does not explain latitudinal differences in songbirds Metabolic rate is negatively linked to adult survival but does not explain latitudinal differences in songbirds

Survival rates vary dramatically among species and predictably across latitudes, but causes of this variation are unclear. The rate of living hypothesis posits that physiological damage from metabolism causes species with faster metabolic rates to exhibit lower survival rates. However, whether increased survival commonly observed in tropical and south temperate latitudes is associated...
Authors
Andy J. Boyce, James C. Mouton, Penn Lloyd, Blair O. Wolf, Thomas E. Martin

Efficacy and biases of cover object survey design for sampling eastern red-backed salamanders (Plethodon cinereus) at forest edge and interior locations Efficacy and biases of cover object survey design for sampling eastern red-backed salamanders (Plethodon cinereus) at forest edge and interior locations

Terrestrial salamanders are adapted to moist, cool microenvironments that facilitate cutaneous respiration and decrease risk of desiccation. Warmer, drier microenvironments may induce habitat use changes by salamanders to alleviate stressful microenvironmental conditions. Changes in salamander habitat use may bias population metrics when sampling occurs in areas with different...
Authors
Eric L. Margenau, Petra B. Wood, Donald A. Brown

Seasonal habitat use indicates that depth may mediate the potential for invasive round goby impacts in inland lakes Seasonal habitat use indicates that depth may mediate the potential for invasive round goby impacts in inland lakes

The round goby (Neogobius melanostomus) is among the fastest-spreading introduced aquatic species in North America and is radiating inland from the Great Lakes into freshwater ecosystems across the landscape. Predicting and managing the impacts of round gobies requires information on the factors influencing their distribution in habitats along the invasion front, yet this information is...
Authors
Kara J. Andres, Suresh Sethi, Elizabeth Duskey, Jesse M. Lepak, Aaron N. Rice, Bobbi J. Estabrook, Kimberly B. Fitzpatrick, Ellen George, Benjamin Marcy-Quay, Matthew R. Paufve, Kelly Perkins, Anne E. Scofield

Epigenetic response of Louisiana Waterthrush Parkesia motacilla to shale gas development Epigenetic response of Louisiana Waterthrush Parkesia motacilla to shale gas development

Epigenetic mechanisms such as DNA methylation may vary in response to environmental stressors and introduce adaptive or maladaptive gene expression within and among wild bird populations. We examined the association between DNA methylation and demographic characteristics of the Louisiana Waterthrush Parkesia motacilla in territories with and without disturbance from shale gas development...
Authors
Mack W. Frantz, Petra B. Wood, Steve Latta, Amy Welsh

Odds ratios and hurdle models: a long-term analysis of parasite infection patterns in endangered young-of-the-year suckers from Upper Klamath Lake, Oregon, USA Odds ratios and hurdle models: a long-term analysis of parasite infection patterns in endangered young-of-the-year suckers from Upper Klamath Lake, Oregon, USA

We used odds ratios and a hurdle model to analyze parasite co-infections over 25 years on >20,000 young-of-the year of endangered Shortnose and Lost River Suckers. Host ecologies differed as did parasite infections. Shortnose Suckers were more likely to be caught inshore and 3–5 times more likely to have Bolbophorus spp. and Contracaecum sp. infections, and Lost River Suckers were more...
Authors
Douglas F. Markle, Andrew Janik, James T. Peterson, Anindo Choudhury, David C. Simon, Vasyl V. Tkach, Mark R. Terwilliger, Justin L. Sanders, Michael L. Kent

Fish diversity, endemism, threats, and conservation in the Jinsha River basin (upper Yangtze River), China Fish diversity, endemism, threats, and conservation in the Jinsha River basin (upper Yangtze River), China

The Jinsha River, which comprises the upper reaches of the Yangtze River, has among the highest freshwater fish biodiversity and endemism in China, but these characteristics have rarely been quantitatively evaluated at the basin scale. We used fish presence–absence data collected from the entire Jinsha River basin (JRB) from 1964 to 2017 to determine patterns in fish biodiversity. In...
Authors
H. W. Liu, C. Guo, X. Qu, F. Xiong, Craig P. Paukert, Y. Chen, W. Sullivan

Electrofishing encounter probability, survival, and dispersal of stocked age-0 Muskellunge in Wisconsin lakes Electrofishing encounter probability, survival, and dispersal of stocked age-0 Muskellunge in Wisconsin lakes

Boat electrofishing is often used to sample age-0 Muskellunge Esox masquinongy for indexing recruitment or evaluating stocking success. However, electrofishing samples typically result in low CPUE, prompting concerns regarding whether catch rates reflect actual abundance or whether boat electrofishing is generally ineffective for capturing age-0 Muskellunge (i.e., if fish are not being...
Authors
Daniel J. Dembkowski, Janice A. Kerns, Emma G. Easterly, Daniel A. Isermann
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