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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5125

Bridging the gap between salmon spawner abundance and marine nutrient assimilation by juvenile salmon: Seasonal cycles and landscape effects at the watershed scale Bridging the gap between salmon spawner abundance and marine nutrient assimilation by juvenile salmon: Seasonal cycles and landscape effects at the watershed scale

Anadromous Pacific salmon are semelparous, and resource subsidies from spawning adults (marine-derived nutrients, or MDN) benefit juvenile salmonids rearing in freshwater. However, it remains unclear how MDN assimilation relates to spawner abundance within a watershed. To address this, we examined seasonal, watershed-scale patterns of MDN assimilation in rearing coho (Oncorhynchus...
Authors
Philip J. Joy, Craig A. Stricker, Renae Ivanoff, Mark S. Wipfli, Andrew C. Seitz, Matthew Tyers

Annual winter water level drawdowns limit shallow-water mussel densities in small lakes Annual winter water level drawdowns limit shallow-water mussel densities in small lakes

Regulated water level fluctuations alter the physical, chemical, and biological environments in lakes. However, few studies have measured the effects of repeated annual winter drawdowns on freshwater mussel populations (Bivalvia: Unionida), and it is unknown whether drawdowns permanently constrain mussel populations to deeper depths or are resilient to the annual disturbance.We...
Authors
Allison H. Roy, Jason R. Carmignani, Peter D. Hazelton, Holly Giard

Incorporating citizen science data in spatially explicit integrated population models Incorporating citizen science data in spatially explicit integrated population models

Information about population abundance, distribution, and demographic rates is critical for understanding a species’ ecology and for effective conservation and management. To collect data over large spatial and temporal extents for such inferences, especially for species with low densities or wide distributions, citizen science can be an efficient approach. Integrated models have also...
Authors
Catherine C. Sun, J. Andrew Royle, Angela K. Fuller

Potential for improving among-reader precision and accuracy of Walleye age estimates with minimal training Potential for improving among-reader precision and accuracy of Walleye age estimates with minimal training

Within most resource management agencies, fish ages assigned by multiple readers are used to estimate age-based population metrics and to develop state or regional growth standards under the assumption that among-reader precision and accuracy are high. A cursory evaluation suggested that precision of age estimates among seven individuals who routinely estimate Walleye Sander vitreus age...
Authors
Daniel J. Dembkowski, Daniel A. Isermann, Ryan P. Koenigs

Bringing Bayesian models to life Bringing Bayesian models to life

Bringing Bayesian Models to Life empowers the reader to extend, enhance, and implement statistical models for ecological and environmental data analysis. We open the black box and show the reader how to connect modern statistical models to computer algorithms. These algorithms allow the user to fit models that answer their scientific questions without needing to rely on automated...
Authors
Mevin Hooten, Trevor J. Hefley

Recruitment dynamics and reproductive ecology of Blue Sucker in Texas, with a focus on the Big Bend region of the Rio Grande Recruitment dynamics and reproductive ecology of Blue Sucker in Texas, with a focus on the Big Bend region of the Rio Grande

Blue Sucker Cycleptus elongatus is a state-listed threatened species in Texas and is considered vulnerable throughout its range. Once considered a single, wide-ranging species, blue suckers are now recognized as a complex of closely related, but genetically and morphologically distinct species within the genus Cycleptus, including an undescribed species within the Rio Grande Basin...
Authors
Seiji Miyazono, Allison A. Pease, Timothy B. Grabowski, Sarah Fritts

Discriminating among Pacific salmon, Rainbow Trout, and Atlantic Salmon species using common genetic screening methods Discriminating among Pacific salmon, Rainbow Trout, and Atlantic Salmon species using common genetic screening methods

The five most common species of Pacific salmon, Rainbow Trout (steelhead) Oncorhynchus spp., and Atlantic Salmon Salmo salar intermingle in the North Pacific Ocean and its freshwater tributaries. Efficient morphological methods for distinguishing among these species are sometimes limited by condition of the specimen (degraded or missing morphology), life history stage, or training of the...
Authors
Christopher Habicht, Andrew Barclay, Heather A. Hoyt, Christian T. Smith, Keith N. Turnquist, Wesley Larson

Wild canid distribution and co-existence in a natural–urban matrix of the Pioneer Valley of Western Massachusetts Wild canid distribution and co-existence in a natural–urban matrix of the Pioneer Valley of Western Massachusetts

Although development and urbanization are typically believed to have negative impacts on carnivoran species, some species can successfully navigate an urban matrix. Sympatric carnivorans compete for limited resources in urban areas, likely with system-specific impacts to their distributions and activity patterns. We used automatically triggered wildlife cameras to assess the local...
Authors
Eric G. LeFlore, Todd K. Fuller, John T. Finn, John F. Organ, Stephen DeStefano

Forest restoration, wildfire, and habitat selection by female mule deer Forest restoration, wildfire, and habitat selection by female mule deer

Decades of fire suppression, logging, and overgrazing have led to increased densities of small diameter trees which have been associated with decreases in biodiversity, reduced habitat quality for wildlife species, degraded foraging conditions for ungulates, and more frequent and severe wildfires. In response, land managers are implementing forest restoration treatments using prescribed...
Authors
Tanya M. Roerick, James W. Cain, J. V. Gedir

Validity of age estimates from muskellunge (Esox masquinongy) fin rays and associated effects on estimates of growth Validity of age estimates from muskellunge (Esox masquinongy) fin rays and associated effects on estimates of growth

Accurate age estimates are critical for understanding life histories of fishes and developing management strategies for fish populations. However, validation of age estimates requires known-age fish, which are often lacking. We used known-age (ages 1–25) muskellunge (Esox masquinongy) to determine the precision and accuracy of age estimates from fin rays. We also determined whether fin...
Authors
Derek P. Crane, Marinda R. Cornett, Cory J. Bauerlien, Michael L. Hawkins, Daniel A. Isermann, Jeff L. Hansbarger, Kevin L. Kapuscinski, Jonathan R. Meerbeek, Timothy D. Simonson, Jeffrey M. Kampa

A three-pipe problem: Dealing with complexity to halt amphibian declines A three-pipe problem: Dealing with complexity to halt amphibian declines

Natural resource managers are increasingly faced with threats to managed ecosystems that are largely outside of their control. Examples include land development, climate change, invasive species, and emerging infectious diseases. All of these are characterized by large uncertainties in timing, magnitude, and effects on species. In many cases, the conservation of species will only be...
Authors
Sarah J. Converse, Evan H. Campbell Grant

Predicting hydrologic disturbance of streams using species occurrence data Predicting hydrologic disturbance of streams using species occurrence data

Aquatic organisms have adapted over evolutionary time-scales to hydrologic variability represented by the natural flow regime of rivers and streams in their unimpaired state. Rapid landscape change coupled with growing human demand for water have altered natural flow regimes of many rivers and streams on a global scale. Climate non-stationarity is expected to further intensify hydrologic
Authors
J.T. Fox, Daniel D. Magoulick
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