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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

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Landscape composition mediates movement and habitat selection in bobcats (Lynx rufus): Implications for conservation planning Landscape composition mediates movement and habitat selection in bobcats (Lynx rufus): Implications for conservation planning

The analysis of individual movement choices can be used to better understand population-level resource selection and inform management.
Authors
Hanem Abouelezz, Therese M. Donovan, Ruth M. Mickey, James N. Murdock, Mark Freeman, Kim Royar

Early mortality and freshwater forage fish recruitment: Nonnative alewife and native rainbow smelt interactions in Lake Champlain Early mortality and freshwater forage fish recruitment: Nonnative alewife and native rainbow smelt interactions in Lake Champlain

We studied the consequences of a nonnative species introduction and changes in temperature on early mortality and recruitment of native rainbow smelt (Osmerus mordax) and nonnative alewife (Alosa pseudoharengus) in Lake Champlain using a simulation model. Distribution patterns of adults and young-of-the-year (YOY) fish were predicted using a model based on observed distribution of...
Authors
Paul W. Simonin, Lars G. Rudstam, Patrick J. Sullivan, Donna L. Parrish, Bernard Pientka

Changing environmental gradients over forty years alter ecomorphological variation in Guadalupe Bass Micropterus treculii throughout a river basin Changing environmental gradients over forty years alter ecomorphological variation in Guadalupe Bass Micropterus treculii throughout a river basin

Understanding the degree of intraspecific variation within and among populations is a key aspect of predicting the capacity of a species to respond to anthropogenic disturbances. However, intraspecific variation is usually assessed at either limited temporal, but broad spatial scales or vice versa, which can make assessing changes in response to long-term disturbances challenging. We...
Authors
Jessica E. Pease, Timothy B. Grabowski, Allison A. Pease, Preston T. Bean

A dam passage performance standard model for American shad A dam passage performance standard model for American shad

Objectives for recovery of alosines commonly involve improving fish passage at dams during migration. However, a quantitative basis for dam passage performance standards is largely absent. We describe development of a stochastic life-history-based simulation model for American shad, Alosa sapidissima, to estimate effects of dam passage and migratory delay on abundance, spatial...
Authors
Daniel S. Stitch, Timothy F. Sheehan, Joseph D. Zydlewski

Managing the vanishing North American hunter: A novel framework to address declines in hunters and hunter-generated conservation funds Managing the vanishing North American hunter: A novel framework to address declines in hunters and hunter-generated conservation funds

As long as the funding mechanism supporting state wildlife conservation relies heavily on hunter-generated funds, declines in hunter participation are a threat to the conservation of both game and non-game species. To address options to bolster wildlife agency profit from the sale of hunting licenses, we developed a stage-based, stochastic population model of a hunter population, and...
Authors
J.L. Price-Tack, Conor P. McGowan, S.S. Ditchkoff, W.C. Morse, Orin J. Robinson

Evaluation of vegetation-fire dynamics in the Okefenokee National Wildlife Refuge, Georgia, USA, with a Bayesian belief network Evaluation of vegetation-fire dynamics in the Okefenokee National Wildlife Refuge, Georgia, USA, with a Bayesian belief network

Vegetation response to wildfire has been studied extensively in upland ecosystems, but fire effects on temperate wetlands are less understood. We evaluated vegetation response to extensive wildfire in wetlands of Okefenokee National Wildlife Refuge (ONWR), USA, with a spatially explicit Bayesian belief network model informed with data recorded during 1990–2012. We assessed model accuracy...
Authors
Cyndy Loftin, Margaret Q. Guyette, Paul R. Wetzel

Direct substitution of fishmeal with bioprocessed soybean meal in brown trout diets Direct substitution of fishmeal with bioprocessed soybean meal in brown trout diets

This 121-day experiment evaluated the rearing performance of juvenile brown trout (Salmo trutta; initial weight 56.1±1.6 g, length 167.2±1.4 mm, mean ±SE) fed one of four isonitrogenous and isocaloric diets (46% protein, 16% lipid). Fishmeal, the primary protein source for the reference diet, was compared to diets where bioprocessed soybean meal directly replaced approximately 60, 80, or...
Authors
Jill M. Voorhees, Michael Barnes, Steven R. Chipps, Michael Browne

Resurgence of specialized shade coffee cultivation: Effects on pollination services and quality of coffee production Resurgence of specialized shade coffee cultivation: Effects on pollination services and quality of coffee production

Since the early 2000s, there has been a resurgence in shade coffee production on the island of Puerto Rico. The newly restored specialized shade canopy consists of four native tree species, three of which are nitrogen fixers, and is intended to provide 30% shade cover once the trees are matured. Though much is known about the benefits of rustic and traditional shade plantations to coffee
Authors
Sara Guiti Prado, Jaime A. Collazo, R. E. Irwin

Accounting for location uncertainty in azimuthaltelemetry data improves ecological inference Accounting for location uncertainty in azimuthaltelemetry data improves ecological inference

Background Characterizing animal space use is critical for understanding ecological relationships. Animal telemetry technology has revolutionized the fields of ecology and conservation biology by providing high quality spatial data on animal movement. Radio-telemetry with very high frequency (VHF) radio signals continues to be a useful technology because of its low cost, miniaturization...
Authors
Mevin Hooten, Brian D. Gerber, Christopher P. Peck, Mindy B. Rice, Anthony D. Apa, James H. Gammonley, Amy J. Davis

Macroinvertebrate sensitivity thresholds for sediment in Virginia streams Macroinvertebrate sensitivity thresholds for sediment in Virginia streams

Sediment is the most commonly identified pollutant associated with macroinvertebrate community impairments in freshwater streams nationwide. Management of this physical stressor is complicated by the multiple measures of sediment available (e.g., suspended, dissolved, bedded) and the variability in natural “healthy” sediment loadings across ecoregions. Here we examine the relative...
Authors
Heather Govenor, Leigh Anne H. Krometis, Lawrence Willis, Paul L. Angermeier, W. Cully Hession

Combining nutrient, productivity, and landscape-based regressions improves predictions of lake nutrients and provides insight into nutrient coupling at macroscales Combining nutrient, productivity, and landscape-based regressions improves predictions of lake nutrients and provides insight into nutrient coupling at macroscales

Empirical nutrient models that describe lake nutrient, productivity, and water clarity relationships among lakes play a prominent role in limnology. Landscape-based regressions are also used to understand macroscale variability of lake nutrients, clarity, and productivity (hereafter referred to as nutrient-productivity). Predictions from both models are used to inform eutrophication...
Authors
Tyler Wagner, Erin M. Schliep

Optimal treatment allocations in space and time for online control of anemerging infectious disease Optimal treatment allocations in space and time for online control of anemerging infectious disease

A key component in controlling the spread of an epidemic is deciding where, when and to whom to apply an intervention. We develop a framework for using data to inform these decisions in realtime. We formalize a treatment allocation strategy as a sequence of functions, one per treatment period, that map up‐to‐date information on the spread of an infectious disease to a subset of locations...
Authors
Eric B. Laber, Nick J. Meyer, Brian J. Reich, Krishna Pacifici, Jaime A. Collazo, John M. Drake
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