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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5125

Functional visual sensitivity to ultraviolet wavelengths in the Pileated Woodpecker (Dryocopus pileatus), and its influence on foraging substrate selection Functional visual sensitivity to ultraviolet wavelengths in the Pileated Woodpecker (Dryocopus pileatus), and its influence on foraging substrate selection

Most diurnal birds are presumed visually sensitive to near ultraviolet (UV) wavelengths, however, controlled behavioral studies investigating UV sensitivity remain few. Although woodpeckers are important as primary cavity excavators and nuisance animals, published work on their visual systems is limited. We developed a novel foraging-based behavioral assay designed to test UV sensitivity...
Authors
Sean T. O’Daniels, Dylan C. Kesler, Jeanne D. Mihail, Elisabeth B. Webb, Scott J. Werner

A dynamic spatio-temporal model for spatial data A dynamic spatio-temporal model for spatial data

Analyzing spatial data often requires modeling dependencies created by a dynamic spatio-temporal data generating process. In many applications, a generalized linear mixed model (GLMM) is used with a random effect to account for spatial dependence and to provide optimal spatial predictions. Location-specific covariates are often included as fixed effects in a GLMM and may be collinear...
Authors
Trevor J. Hefley, Mevin Hooten, Ephraim M. Hanks, Robin Russell, Daniel P. Walsh

Response of fish population dynamics to mitigation activities in a large regulated river Response of fish population dynamics to mitigation activities in a large regulated river

Extensive water development in large rivers has precipitated many negative ecological effects on native fish populations. Mitigation for such development often focuses on restoring biological integrity through remediation of the physical and chemical properties of regulated rivers. However, evaluating and defining the success of those programs can be difficult. We modeled the influence...
Authors
Carson J. Watkins, Tyler J. Ross, Michael C. Quist, Ryan S. Hardy

Using variance structure to quantify responses to perturbation in fish catches Using variance structure to quantify responses to perturbation in fish catches

We present a case study evaluation of gill-net catches of Walleye Sander vitreus to assess potential effects of large-scale changes in Oneida Lake, New York, including the disruption of trophic interactions by double-crested cormorants Phalacrocorax auritus and invasive dreissenid mussels. We used the empirical long-term gill-net time series and a negative binomial linear mixed model to...
Authors
Tiffany E. Vidal, Brian J. Irwin, Tyler Wagner, Lars G. Rudstam, James R. Jackson, James R. Bence

White-cheeked Pintail duckling and brood survival across wetland types at Humacao Nature Reserve, Puerto Rico White-cheeked Pintail duckling and brood survival across wetland types at Humacao Nature Reserve, Puerto Rico

Duckling survival is an important influence on recruitment in several North American Anas species. White-cheeked Pintail (Anas bahamensis) breeding in Puerto Rico encounter a variety of wetland types that may influence duckling survival. We monitored fates of 92 radio-tagged ducklings in 31 broods in 5 wetland habitat types at Humacao Nature Reserve in southeastern Puerto Rico from 2000...
Authors
J. Brian Davis, Francisco Vilella, Joseph D. Lancaster, Marisel Lopez-Flores, Richard M. Kaminski, Jose A. Cruz-Burgos

Effect of substrate size on sympatric sand darter benthic habitat preferences Effect of substrate size on sympatric sand darter benthic habitat preferences

The western sand darter, Ammocrypta clara, and the eastern sand darter, A. pellucida, are sand-dwelling fishes that have undergone range-wide population declines, presumably owing to habitat loss. Habitat use studies have been conducted for the eastern sand darter, but literature on the western sand darter remains sparse. To evaluate substrate selection and preference, western and...
Authors
Patricia A. Thompson, Stuart A. Welsh, Austin A. Rizzo, Dustin M. Smith

Do we need demographic data to forecast plant population dynamics? Do we need demographic data to forecast plant population dynamics?

Rapid environmental change has generated growing interest in forecasts of future population trajectories. Traditional population models built with detailed demographic observations from one study site can address the impacts of environmental change at particular locations, but are difficult to scale up to the landscape and regional scales relevant to management decisions. An alternative...
Authors
Andrew T. Tredennick, Mevin Hooten, Peter B. Adler

Fall and winter survival of brook trout and brown trout in a north-central Pennsylvania watershed Fall and winter survival of brook trout and brown trout in a north-central Pennsylvania watershed

Stream-dwelling salmonids that spawn in the fall generally experience their lowest survival during the fall and winter due to behavioral changes associated with spawning and energetic deficiencies during this time of year. We used data from Brook Trout Salvelinus fontinalis and Brown Trout Salmo trutta implanted with radio transmitters in tributaries of the Hunts Run watershed of north...
Authors
John A. Sweka, Lori A. Davis, Tyler Wagner

Distribution and abundance of Millicoma Dace in the Coos River Basin, Oregon Distribution and abundance of Millicoma Dace in the Coos River Basin, Oregon

The Millicoma Dace Rhinichthys cataractae is a form of Longnose Dace endemic to the Coos River drainage in southwestern Oregon. Sparse species records in the Oregon State University Ichthyology Collection and database and infrequent recent encounters prompted surveys to assess the current status and distribution of the species. In 2014, we surveyed locations that had historically...
Authors
Paul D. Scheerer, James T. Peterson, Shaun Clements

Achieving full connectivity of sites in the multiperiod reserve network design problem Achieving full connectivity of sites in the multiperiod reserve network design problem

The conservation reserve design problem is a challenge to solve because of the spatial and temporal nature of the problem, uncertainties in the decision process, and the possibility of alternative conservation actions for any given land parcel. Conservation agencies tasked with reserve design may benefit from a dynamic decision system that provides tactical guidance for short-term...
Authors
Nahid Jafari, Bryan L. Nuse, Clinton T. Moore, Bistra Dilkina, Jeffrey Hepinstall-Cymerman

Contributions of wildland fire to terrestrial ecosystem carbon dynamics in North America from 1990 to 2012 Contributions of wildland fire to terrestrial ecosystem carbon dynamics in North America from 1990 to 2012

Burn area and the frequency of extreme fire events have been increasing during recent decades in North America, and this trend is expected to continue over the 21st century. While many aspects of the North American carbon budget have been intensively studied, the net contribution of fire disturbance to the overall net carbon flux at the continental scale remains uncertain. Based on...
Authors
Guangsheng Chen, Daniel J. Hayes, A. David McGuire

Disturbance of a rare seabird by ship-based tourism in a marine protected area Disturbance of a rare seabird by ship-based tourism in a marine protected area

Managers of marine protected areas (MPAs) must often seek ways to allow for visitation while minimizing impacts to the resources they are intended to protect. Using shipboard observers, we quantified the “zone of disturbance” for Kittlitz’s and marbled murrelets (Brachyramphus brevirostris and B. marmoratus) exposed to large cruise ships traveling through Glacier Bay National Park, one...
Authors
Timothy K. Marcella, Scott M. Gende, Daniel D. Roby, Arthur Allignol
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