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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5294

Evaluation of artificial cover units as a sampling technique and habitat enhancement for madtoms in rivers Evaluation of artificial cover units as a sampling technique and habitat enhancement for madtoms in rivers

Instream habitat degradation and loss are major threats to freshwater fishes and critical conservation issues among nongame species, due to a lack of research and knowledge concerning their habitat requirements. Instream physical cover is an important component of fish habitat, especially for benthic species that require cover for reproduction and shelter from predators. One such species...
Authors
W. R. Cope, Thomas J. Kwak, T. R. Black, Krishna Pacifici

Puerto Rico Sicydium goby diversity: Species-specific insights on population structures and distributions Puerto Rico Sicydium goby diversity: Species-specific insights on population structures and distributions

Sicydiine gobies are major contributors to Caribbean stream fish biodiversity, and ecosystem functions and services. In the Caribbean, Sicydiine gobies are represented by a single genus, Sicydium, but species-level Sicydium taxonomy and distributions remain unresolved in this region. A previous study posited that four species of Sicydium are present in Puerto Rico, including the recently...
Authors
A.C. Engman, G.M Hogue, W.C. Starnes, M. E. Raley, Thomas J. Kwak

Adapting to climate change: Guidance for the management of inland glacial lake fisheries Adapting to climate change: Guidance for the management of inland glacial lake fisheries

Climate change is altering glacial lake fisheries in the United States, presenting a complex challenge for fisheries managers. Here we provide a regional perspective to guide management of heterogeneous and yet interdependent fishery resources in glacial lakes of the upper Midwest. Our main objective was to promote the adaptation of inland glacial lakes fisheries management to climate...
Authors
R.W. Tingley, Craig P. Paukert, G. G. Sass, P. C. Jacobson, G. J. A. Hansen, Abigail J. Lynch, P. D. Shannon

Does vegetation change over 28 years affect habitat use and reproductive success? Does vegetation change over 28 years affect habitat use and reproductive success?

Individuals should prefer and use habitats that confer high fitness, but habitat use is not always adaptive. Vegetation in natural landscapes changes gradually and the ability of species to adaptively adjust their habitat use to long-term changes is largely unstudied. We studied nest patch and territory use over 28 yr in Orange-crowned Warblers (Oreothlypis celata) in a system that has...
Authors
Karolina Fierro-Calderón, Thomas E. Martin

Nonlinear reaction–diffusion process models improve inference for population dynamics Nonlinear reaction–diffusion process models improve inference for population dynamics

Partial differential equations (PDEs) are a useful tool for modeling spatiotemporal dynamics of ecological processes. However, as an ecological process evolves, we need statistical models that can adapt to changing dynamics as new data are collected. We developed a model that combines an ecological diffusion equation and logistic growth to characterize colonization processes of a...
Authors
Xinyi Lu, Perry J. Williams, Mevin Hooten, James A. Powell, Jamie N. Womble, Michael R. Bower

De novo assembly and annotation from parental and F1 puma genomes of the Florida panther genetic restoration program De novo assembly and annotation from parental and F1 puma genomes of the Florida panther genetic restoration program

In the mid-1990s, the population size of Florida panthers became so small that many individuals manifested traits associated with inbreeding depression (e.g., heart defects, cryptorchidism, high pathogen-parasite load). To mitigate these effects, pumas from Texas were introduced into South Florida to augment genetic variation in Florida panthers. In this study, we report a de novo puma...
Authors
Alexander Ochoa, David P. Onorato, Robert R. Fitak, Melody Roelke-Parker, Melanie Culver

Variation in selective regimes drives intraspecific variation in life-history traits and migratory behaviour along an elevational gradient Variation in selective regimes drives intraspecific variation in life-history traits and migratory behaviour along an elevational gradient

Comparative studies, across and within taxa, have made important contributions to our understanding of the evolutionary processes that promote phenotypic diversity. Trait variation along geographic gradients provides a convenient heuristic for understanding what drives and maintains diversity. Intraspecific trait variation along latitudinal gradients is well-known, but elevational...
Authors
Carl G. Lundblad, Courtney J. Conway

Toward a theory of connectivity among depressional wetlands of the great plains Toward a theory of connectivity among depressional wetlands of the great plains

Functions of inland, freshwater depressional wetlands of the Great Plains are driven by natural disturbance in the form of fluctuating water levels or shifts between wet and dry ecological states. The geographically isolated prairie potholes and playas form broad-scale systems or networks that support biodiversity and provide ecological goods and services. Anthropogenic disturbance...
Authors
Gene Albanese, David A. Haukos

Age and growth of Freshwater Drum and Gizzard Shad occupying two reservoir-river complexes with different groundwater contributions Age and growth of Freshwater Drum and Gizzard Shad occupying two reservoir-river complexes with different groundwater contributions

Restoring groundwater flow is a management option that improves water temperature regimes and benefits fishes. Although this strategy applies more readily to river systems, the thermal character of reservoirs is heavily influenced by inflowing rivers. We examined differences in age, structure, and growth of both Freshwater Drum Aplodinotus grunniens and Gizzard Shad Dorosoma cepedianum...
Authors
J Dattilo, D. E. Shoup, Shannon K. Brewer

Reduced species richness of native bees in field margins associated with neonicotinoid concentrations in non-target soils Reduced species richness of native bees in field margins associated with neonicotinoid concentrations in non-target soils

Native bees are in decline as many species are sensitive to habitat loss, climate change, and non-target exposure to synthetic pesticides. Recent laboratory and semi-field assessments of pesticide impacts on bees have focused on neonicotinoid insecticides. However, field studies evaluating influences of neonicotinoid seed treatments on native bee communities of North America are absent...
Authors
A.R. Main, Elisabeth B. Webb, K. W. Goyne, D. Mengel

Population ecology and evaluation of suppression scenarios for an introduced Utah Chub population Population ecology and evaluation of suppression scenarios for an introduced Utah Chub population

Introduced Utah Chub Gila atraria were first sampled in Henrys Lake, Idaho, in 1993, and their presence in the system is a concern given possible interactions with sport fishes. Our objective was to describe the population dynamics of Utah Chub in Henrys Lake. A total of 362 Utah Chub was sampled via gill nets, with an average catch rate of 20.5 fish/net-night (SE = 6.0) during May 2016...
Authors
Curtis J. Roth, Zachary S. Beard, Jonathan M Flinders, Michael C. Quist
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