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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

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Ecological neighborhoods as a framework for umbrella species selection Ecological neighborhoods as a framework for umbrella species selection

Umbrella species are typically chosen because they are expected to confer protection for other species assumed to have similar ecological requirements. Despite its popularity and substantial history, the value of the umbrella species concept has come into question because umbrella species chosen using heuristic methods, such as body or home range size, are not acting as adequate proxies...
Authors
Erica F. Stuber, Joseph J. Fontaine

Effects of summer air exposure on the survival of caught-and-released salmonids Effects of summer air exposure on the survival of caught-and-released salmonids

Despite the success of catch‐and‐release regulations, exposing fish to air during release has emerged as a growing concern over the past two decades. We evaluated the effect of air exposure during midsummer on survival of Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri, Bull Trout Salvelinus confluentus, and Rainbow Trout O. mykiss exposed to catch‐and‐release angling. Fish...
Authors
Curtis J. Roth, Daniel J. Schill, Michael C. Quist, Brett High

A guide to Bayesian model checking for ecologists A guide to Bayesian model checking for ecologists

Checking that models adequately represent data is an essential component of applied statistical inference. Ecologists increasingly use hierarchical Bayesian statistical models in their research. The appeal of this modeling paradigm is undeniable, as researchers can build and fit models that embody complex ecological processes while simultaneously accounting for observation error. However
Authors
Paul B. Conn, Devin S. Johnson, Perry J. Williams, Sharon R. Melin, Mevin Hooten

Probabilistic measures of climate change vulnerability, adaptation action benefits, and related uncertainty from maximum temperature metric selection Probabilistic measures of climate change vulnerability, adaptation action benefits, and related uncertainty from maximum temperature metric selection

Predictions of the projected changes in species distributions and potential adaptation action benefits can help guide conservation actions. There is substantial uncertainty in projecting species distributions into an unknown future, however, which can undermine confidence in predictions or misdirect conservation actions if not properly considered. Recent studies have shown that the...
Authors
Jefferson T. DeWeber, Tyler Wagner

Landscape‐level patterns in fawn survival across North America Landscape‐level patterns in fawn survival across North America

A landscape‐level meta‐analysis approach to examining early survival of ungulates may elucidate patterns in survival not evident from individual studies. Despite numerous efforts, the relationship between fawn survival and habitat characteristics remains unclear and there has been no attempt to examine trends in survival across landscape types with adequate replication. In 2015–2016, we
Authors
Tess M. Gingery, Duane R. Diefenbach, Bret D. Wallingford, Christopher S. Rosenberry

Respiratory disease, behavior, and survival of mountain goat kids Respiratory disease, behavior, and survival of mountain goat kids

Bacterial pneumonia is a threat to bighorn sheep (Ovis canadensis) populations. Bighorn sheep in the East Humboldt Mountain Range (EHR), Nevada, USA, experienced a pneumonia epizootic in 2009–2010. Testing of mountain goats (Oreamnos americanus) that were captured or found dead on this range during and after the epizootic detected bacteria commonly associated with bighorn sheep pneumonia...
Authors
Julie A. Blanchong, Christopher A. Anderson, Nicholas J. Clark, Robert W. Klaver, Paul J. Plummer, Mike Cox, Caleb Mcadoo, Peregrine L. Wolff

Genome-wide analysis of SNPs is consistent with no domestic dog ancestry in the endangered Mexican Wolf (Canis lupus baileyi) Genome-wide analysis of SNPs is consistent with no domestic dog ancestry in the endangered Mexican Wolf (Canis lupus baileyi)

The Mexican gray wolf (Canis lupus baileyi) was historically distributed throughout the southwestern United States and northern Mexico. Extensive predator removal campaigns during the early 20th century, however, resulted in its eventual extirpation by the mid 1980s. At this time, the Mexican wolf existed only in 3 separate captive lineages (McBride, Ghost Ranch, and Aragón) descended...
Authors
Robert R. Fitak, Sarah E. Rinkevich, Melanie Culver

Hydrologic characteristics of freshwater mussel habitat: novel insights from modeled flows Hydrologic characteristics of freshwater mussel habitat: novel insights from modeled flows

The ability to model freshwater stream habitat and species distributions is limited by the spatially sparse flow data available from long-term gauging stations. Flow data beyond the immediate vicinity of gauging stations would enhance our ability to explore and characterize hydrologic habitat suitability. The southeastern USA supports high aquatic biodiversity, but threats, such as...
Authors
C. Ashton Drew, Michele Eddy, Thomas J. Kwak, W. Gregory Cope, Tom Augspurger

Do postlarval amphidromous fishes transport marine‐derived nutrients and pollutants to Caribbean streams? Do postlarval amphidromous fishes transport marine‐derived nutrients and pollutants to Caribbean streams?

Diadromous fishes are known biotransport vectors that can move nutrients, energy and contaminants in an upstream direction in lotic ecosystems. This function has been demonstrated repeatedly in anadromous salmonids, but the role of other diadromous species, especially tropical taxa, as biotransport vectors is less studied. Amphidromous fish species exhibit potential to act as upstream...
Authors
Augustin C. Engman, Thomas J. Kwak, W. Gregory Cope

Spatial extent of analysis influences observed patterns of population genetic structure in a widespread darter species (Percidae) Spatial extent of analysis influences observed patterns of population genetic structure in a widespread darter species (Percidae)

Connectivity among stream fish populations allows for exchange of genetic material and helps maintain genetic diversity, adaptive potential and population stability over time. Changes in species demographics and population connectivity have the potential to permanently alter the genetic patterns of stream fish, although these changes through space and time are variable and understudied...
Authors
Jane E. Argentina, Paul L. Angermeier, Eric M. Hallerman, Stuart A. Welsh

Influences of spawning timing, water temperature, and climatic warming on early life history phenology in western Alaska sockeye salmon Influences of spawning timing, water temperature, and climatic warming on early life history phenology in western Alaska sockeye salmon

We applied an empirical model to predict hatching and emergence timing for 25 western Alaska sockeye salmon (Oncorhynchus nerka) populations in four lake-nursery systems to explore current patterns and potential responses of early life history phenology to warming water temperatures. Given experienced temperature regimes during development, we predicted hatching to occur in as few as 58...
Authors
Morgan M. Sparks, Jeffrey A. Falke, Thomas P. Quinn, Milo D. Adkison, Daniel E. Schindler, Krista K. Bartz, Daniel B. Young, Peter A. H. Westley
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