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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5124

Monitoring animal populations with cameras using open, multistate, N-mixture models Monitoring animal populations with cameras using open, multistate, N-mixture models

Remote cameras have become a mainstream tool for studying wildlife populations. For species whose developmental stages or states are identifiable in photographs, there are opportunities for tracking population changes and estimating demographic rates. Recent developments in hierarchical models allow for the estimation of ecological states and rates over time for unmarked animals whose...
Authors
Alexej P.K. Siren, Michael T. Hallworth, Jillian R. Kilborn, Chris A. Bernier, Nicholas L. Fortin, Katherina D. Geider, Riley K. Patry, Rachel M. Cliche, Leighlan S. Prout, Suzanne J. Gifford, Scott Wixsom, Toni Lyn Morelli, Tammy L. Wilson

Facilitating psychological safety in science and research teams Facilitating psychological safety in science and research teams

Science is increasingly dependent on large teams working well together. Co-creating knowledge in this way, usually across disciplines and institutions, requires team members to feel comfortable taking interpersonal risks with each other; in other words, to have what is known as “psychological safety”. Although the importance of psychological safety for team functioning is increasingly...
Authors
Megan Siobhan Jones, Amanda E. Cravens, Jill Zarestky, Courtney Ngai, Hannah B. Love

The complete genome sequence of Splendidofilaria pectoralis (Onchocercidae, Rhabditida, Chromadorea, Nematoda) The complete genome sequence of Splendidofilaria pectoralis (Onchocercidae, Rhabditida, Chromadorea, Nematoda)

We present the complete genome sequence of Splendidofilaria pectoralis, a nematode parasite of grouse (Aves: Galliformes: Tetraonini). Illumina paired-end reads were assembled by a de novo method followed by a finishing step. The raw and assembled data are publicly available via GenBank: Sequence Read Archive (SRR28509439) and assembled genome (JBFSWT000000000).
Authors
Andrew D. Sweet, Robert Wilson, Jack Reakoff, Sarah A. Sonsthagen, Colleen Hurst, Stacy Pirro

Climate vulnerability assessment of Oregon hatchery programs Climate vulnerability assessment of Oregon hatchery programs

The goal of this project was to assess the vulnerability to climate change impacts for a sample set of hatchery programs representing different geographic areas and primary anadromous species raised in state-managed Oregon hatcheries (Summary Figure 1). Freshwater and marine ecosystem processes can significantly influence salmon and steelhead survival, and understanding how these factors...
Authors
Hannah Barrett, Melanie J. Davis

Gulf of Mexico Marine Assessment Program for Protected Species (GOMMAPPS): Seabird surveys in the northern Gulf of Mexico, 2017-2020 Gulf of Mexico Marine Assessment Program for Protected Species (GOMMAPPS): Seabird surveys in the northern Gulf of Mexico, 2017-2020

No abstract available.
Authors
Jeffrey S. Gleason, Allison Sussman, Kayla L. Davis, J. Christopher Haney, Kathy M. Hixson, Patrick G.R. Jodice, James E. Lyons, Pamela E. Michael, Yvan G. Satgé, Emily D. Silverman, Elise F. Zipkin, R. Randy Wilson

Reproductive trends in Little Brown Bats before and after the onset of white-nose syndrome in Virginia Reproductive trends in Little Brown Bats before and after the onset of white-nose syndrome in Virginia

Myotis lucifugus (Little Brown Bat) declines in Virginia following white-nose syndrome (WNS) prompted an investigation into reproductive behaviors of surviving individuals. To examine reproductive change, we examined female bats prior to, during and after endemism establishment. We also examined capture trends of juveniles at maternity colonies. Timing and proportion of reproductive...
Authors
Karen E. Powers, W. Mark Ford, Richard J. Reynolds, William D. Orndorff, David E. Yates, Thomas E. Malabad

Sensitivity of Alabama freshwater gastropod species to nickel exposure Sensitivity of Alabama freshwater gastropod species to nickel exposure

Snails are effective bioindicators due to their prolific distribution, high level of endemism, and capacity to accumulate contaminants. Freshwater snails have unique ecological niches which are imperiled by land‐use change and the introduction of hazardous chemicals. To assess how environmental alterations affect gastropods, lab‐based studies are needed to characterize the toxicity of...
Authors
Andrew Barrick, Sean Parham, Paul Johnson, Shannon K. Brewer, Tham Hoang

Effects of 2D hydrodynamic model resolution on habitat estimates for rearing Coho Salmon in contrasting channel forms Effects of 2D hydrodynamic model resolution on habitat estimates for rearing Coho Salmon in contrasting channel forms

Estimating the impacts of water allocation decisions on fish populations and habitat availability is an important part of environmental flow assessments, especially in locations where water resources are limited. Two-dimensional hydrodynamic models (2DHMs) are commonly coupled with biological models to estimate fish habitat quality, area, and capacity across a range of proposed...
Authors
Reuben B. Smit, Damon H. Goodman, Josh Boyce, Nicholas A. Som

Cycles in adult steelhead length suggest interspecific competition in the North Pacific Ocean Cycles in adult steelhead length suggest interspecific competition in the North Pacific Ocean

Anadromous fishes rely on abundant prey in the ocean to grow large quickly, but prey limitation leads to interspecific competition. When species interactions are difficult to observe, growth can be studied to detect otherwise cryptic signals of competition. We describe a previously undocumented two-year cycle in the lengths of adult natural-origin steelhead (Oncorhynchus mykiss)...
Authors
Ryan A. Vosbigian, Logan Wendling, Timothy Copeland, Matthew Richard Falcy

Wintering grounds leave their mark: Where birds winter influences genomic structure in Arctic nesting common eiders Wintering grounds leave their mark: Where birds winter influences genomic structure in Arctic nesting common eiders

Information about the distribution of genomic variation within and between nesting locations of waterfowl can aid in defining populations and conservation plans and inform harvest management. Identification of locations where shifts in allelic diversity occur is particularly important for Arctic nesting species nesting, a region currently experiencing rapid change associated with climate...
Authors
Sarah A. Sonsthagen, Robert E. Wilson, Russell R. Turner, Marie-Josee Fortin, Grant Gilchrist, Vicki L. Friesen

Leveraging local wildlife surveys for robust occupancy trend estimation Leveraging local wildlife surveys for robust occupancy trend estimation

Natural resource agencies are frequently tasked with monitoring populations of at-risk species to ensure management activities do not negatively affect the viability of wildlife populations. Typically, these monitoring efforts evaluate trends in a population’s abundance, occupancy, or geographic distribution. Often, surveys provide local information, but results are generally not...
Authors
Jordan L. Heiman, Jody M. Tucker, Sarah Nelson Sells, Joshua J. Millspaugh, Michael K. Schwartz
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