Allen M. Shapiro, Ph.D. (Former Employee)
Science and Products
Microbial community analyses of groundwater collected during an enhanced bioremediation experiment of trichlorethylene in a fractured rock aquifer, West Trenton, NJ (2008-2015) Microbial community analyses of groundwater collected during an enhanced bioremediation experiment of trichlorethylene in a fractured rock aquifer, West Trenton, NJ (2008-2015)
These datasets contain microbial community data from groundwater samples collected at an in situ bioremediation site located at the former Naval Air Warfare Center (NAWC), West Trenton, NJ. DNA was extracted from groundwater samples collected from monitoring wells at the NAWC study site from July 2008 through July 2015 and analyzed for microbial community structure. Sample collection...
Algorithms for model parameter estimation and state estimation using the Kalman Filter for forecasting, filtering, and fixed-lag smoothing applied to a state-space model for one-dimensional vertical infiltration Algorithms for model parameter estimation and state estimation using the Kalman Filter for forecasting, filtering, and fixed-lag smoothing applied to a state-space model for one-dimensional vertical infiltration
The algorithms in this data release implement a State-Space Model (SSM) of vertical infiltration through the unsaturated zone and recharge to the water table. These algorithms build on previous investigations available at https://doi.org/10.1029/2020WR029110 and https://doi.org/10.1111/gwat.13206. The SSM is defined by observed states (i.e., the water-table altitude) and unobserved...
Algorithms for model parameter estimation and state estimation applied to a state-space model for one-dimensional vertical infiltration incorporating snowmelt rate as a system input Algorithms for model parameter estimation and state estimation applied to a state-space model for one-dimensional vertical infiltration incorporating snowmelt rate as a system input
The algorithms and input data included in this data release are used to interpret time-series data (water-table altitude, precipitation, snowmelt, and potential evapotranspiration) over an observation period to estimate model parameters of a State-Space Model (SSM) of vertical infiltration to the groundwater table. The SSM model is coupled with a Kalman Filter (KF) to estimate system...
Algorithms for model parameter estimation, state estimation, and forecasting applied to a State-Space model coupled with the Kalman Filter for one-dimensional vertical infiltration to fractured rock aquifers Algorithms for model parameter estimation, state estimation, and forecasting applied to a State-Space model coupled with the Kalman Filter for one-dimensional vertical infiltration to fractured rock aquifers
The algorithms and input data included in this data release are used to interpret time-series data (water- table altitude, precipitation, and potential evapotranspiration) over an observation period to estimate model parameters of a State-Space (SS) model of vertical infiltration to a fractured-rock aquifer. The SS model is coupled with a Kalman Filter (KF) to estimate system states...
Water Level Altitude in Bedrock Wells and Meteorological Data at the Masser Groundwater Recharge Site between February 1 and December 31, 1999 Water Level Altitude in Bedrock Wells and Meteorological Data at the Masser Groundwater Recharge Site between February 1 and December 31, 1999
This product contains time-series data for groundwater level altitudes in bedrock boreholes and meteorological information from a site administered by the U.S. Department of Agriculture (USDA), Agricultural Research Service (ARS). The site, referred to as the Masser Groundwater Recharge Site, is located in the Valley and Ridge Physiographic Province of eastern-central Pennsylvania, USA
Concentrations of Chlorinated Ethene Compounds in Rock Core Collected from the Mudstone Underlying the former Naval Air Warfare Center, West Trenton, New Jersey Concentrations of Chlorinated Ethene Compounds in Rock Core Collected from the Mudstone Underlying the former Naval Air Warfare Center, West Trenton, New Jersey
These data sets present results from the analyses of chlorinated ethene compounds in samples of rock core collected from boreholes in the mudstone underlying the former Naval Air Warfare Center, West Trenton, New Jersey.
Filter Total Items: 69
Water supply in the conterminous United States, Alaska, Hawaii, and Puerto Rico, water years 2010–20 Water supply in the conterminous United States, Alaska, Hawaii, and Puerto Rico, water years 2010–20
We present an assessment of water supply across the conterminous United States (CONUS), Alaska, Hawaii, and Puerto Rico covering water years 2010–20. Our analysis drew on two national hydrologic models, the National Hydrologic Model Precipitation-Runoff Modeling System and the Weather Research and Forecasting model hydrologic modeling system. Both models produced estimates of streamflow
Authors
Galen Gorski, Edward G. Stets, Martha A. Scholl, James R. Degnan, John R. Mullaney, Amy E. Galanter, Anthony J. Martinez, Julie Padilla, Jacob H. LaFontaine, Hayley R. Corson-Dosch, Allen Shapiro
Benefits and cautions in data assimilation strategies: An example of modeling groundwater recharge Benefits and cautions in data assimilation strategies: An example of modeling groundwater recharge
Assimilating recent observations improves model outcomes for real-time assessments of groundwater processes. This is demonstrated in estimating time-varying recharge to a shallow fractured-rock aquifer in response to precipitation. Results from estimating the time-varying water-table altitude (h) and recharge, and their error covariances, are compared for forecasting, filtering, and...
Authors
Allen M. Shapiro, Frederick Day-Lewis
Mapping areas of groundwater susceptible to transient contamination events from rapid infiltration into shallow fractured-rock aquifers in agricultural regions of the conterminous United States Mapping areas of groundwater susceptible to transient contamination events from rapid infiltration into shallow fractured-rock aquifers in agricultural regions of the conterminous United States
Current time-invariant groundwater vulnerability assessments may not capture intermittent contamination events in landscape areas that experience rapid infiltration following precipitation or snowmelt. Occurrences of rapid infiltration and intermittent degradation of groundwater quality are frequently reported in fractured-rock aquifers. This investigation identifies landscape areas...
Authors
Allen M. Shapiro, James A. Falcone
Application of recursive estimation to heat tracing for groundwater/surface-water exchange Application of recursive estimation to heat tracing for groundwater/surface-water exchange
We present and demonstrate a recursive-estimation framework to infer groundwater/surface-water exchange based on temperature time series collected at different vertical depths below the sediment/water interface. We formulate the heat-transport problem as a state-space model (SSM), in which the spatial derivatives in the convection/conduction equation are approximated using finite...
Authors
W. Anderson McAliley, Frederick Day-Lewis, David M. Rey, Martin A. Briggs, Allen M. Shapiro, Dale Werkema
Incorporating snowmelt into daily estimates of recharge using a state-space model of infiltration Incorporating snowmelt into daily estimates of recharge using a state-space model of infiltration
A state-space model (SSM) of infiltration estimates daily groundwater recharge using time-series of groundwater-level altitude and meteorological inputs (liquid precipitation, snowmelt, and evapotranspiration). The model includes diffuse and preferential flow through the unsaturated zone, where preferential flow is a function of liquid precipitation and snowmelt rates and a threshold...
Authors
Allen M. Shapiro, Frederick Day-Lewis, William M. Kappel, John Williams
Reframing groundwater hydrology as a data-driven science Reframing groundwater hydrology as a data-driven science
No abstract available.
Authors
Allen M. Shapiro, F.D. Day-Lewis
Non-USGS Publications**
Pinder, G. F. and Shapiro, A. 1982. Physics of Flow in Geothermal Systems, in Recent Trends in Hydrogeology. ed. T. N. Narasimhan. Geological Society of America, Boulder, CO. p. 25-30. https://doi.org/10.1130/SPE189-p25.
Pinder, G. F. and Shapiro, A. 1979. A new collocation method for the solution of the convection-dominated transport equation. Water Resources Research 15(5): 1177-1182. https://doi.org/10.1029/WR015i005p01177.
Pinder, G. F. and Shapiro, A. 1980. Reply to comment on "A new collocation method for the solution of the convection-dominated transport equation". Water Resources Research 16(6): 1137. https://doi.org/10.1029/WR016i006p01137.
Shapiro, A. and Pinder, G. F. 1981. Analysis of an upstream weighted collocation approximation to the transport equation. Journal of Computational Physics 39(1): 46-71. https://doi.org/10.1016/0021-9991(81)90136-4.
Andersson, J. and Shapiro, A. M. 1983. Stochastic analysis of one-dimensional steady state unsaturated flow: A Comparison of Monte Carlo and Perturbation Methods. Water Resources Research 19(1): 121-133. 10.1029/WR019i001p00121.
Shapiro, A. M. and Andersson, J. 1983. Steady state fluid response in fractured rock: A boundary element solution for a coupled, discrete fracture continuum model. Water Resources Research 19(4): 959-969. 10.1029/WR019i004p00959.
Andersson, J., Shapiro, A. M. and Bear, J. 1984. A Stochastic Model of a Fractured Rock Conditioned by Measured Information. Water Resources Research 20(1): 79-88. 10.1029/WR020i001p00079.
Bear, J. and Shapiro, A. M. 1984. On the shape of the non-steady interface intersecting discontinuities in permeability. Advances in Water Resources 7(3): 106-112. https://doi.org/10.1016/0309-1708(84)90037-X.
Bear, J., Shamir, U., Gamliel, A. and Shapiro, A. M. 1985. Motion of the seawater interface in a coastal aquifer by the method of successive steady states. Journal of Hydrology 76(1): 119-132. https://doi.org/10.1016/0022-1694(85)90093-9.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Science and Products
Microbial community analyses of groundwater collected during an enhanced bioremediation experiment of trichlorethylene in a fractured rock aquifer, West Trenton, NJ (2008-2015) Microbial community analyses of groundwater collected during an enhanced bioremediation experiment of trichlorethylene in a fractured rock aquifer, West Trenton, NJ (2008-2015)
These datasets contain microbial community data from groundwater samples collected at an in situ bioremediation site located at the former Naval Air Warfare Center (NAWC), West Trenton, NJ. DNA was extracted from groundwater samples collected from monitoring wells at the NAWC study site from July 2008 through July 2015 and analyzed for microbial community structure. Sample collection...
Algorithms for model parameter estimation and state estimation using the Kalman Filter for forecasting, filtering, and fixed-lag smoothing applied to a state-space model for one-dimensional vertical infiltration Algorithms for model parameter estimation and state estimation using the Kalman Filter for forecasting, filtering, and fixed-lag smoothing applied to a state-space model for one-dimensional vertical infiltration
The algorithms in this data release implement a State-Space Model (SSM) of vertical infiltration through the unsaturated zone and recharge to the water table. These algorithms build on previous investigations available at https://doi.org/10.1029/2020WR029110 and https://doi.org/10.1111/gwat.13206. The SSM is defined by observed states (i.e., the water-table altitude) and unobserved...
Algorithms for model parameter estimation and state estimation applied to a state-space model for one-dimensional vertical infiltration incorporating snowmelt rate as a system input Algorithms for model parameter estimation and state estimation applied to a state-space model for one-dimensional vertical infiltration incorporating snowmelt rate as a system input
The algorithms and input data included in this data release are used to interpret time-series data (water-table altitude, precipitation, snowmelt, and potential evapotranspiration) over an observation period to estimate model parameters of a State-Space Model (SSM) of vertical infiltration to the groundwater table. The SSM model is coupled with a Kalman Filter (KF) to estimate system...
Algorithms for model parameter estimation, state estimation, and forecasting applied to a State-Space model coupled with the Kalman Filter for one-dimensional vertical infiltration to fractured rock aquifers Algorithms for model parameter estimation, state estimation, and forecasting applied to a State-Space model coupled with the Kalman Filter for one-dimensional vertical infiltration to fractured rock aquifers
The algorithms and input data included in this data release are used to interpret time-series data (water- table altitude, precipitation, and potential evapotranspiration) over an observation period to estimate model parameters of a State-Space (SS) model of vertical infiltration to a fractured-rock aquifer. The SS model is coupled with a Kalman Filter (KF) to estimate system states...
Water Level Altitude in Bedrock Wells and Meteorological Data at the Masser Groundwater Recharge Site between February 1 and December 31, 1999 Water Level Altitude in Bedrock Wells and Meteorological Data at the Masser Groundwater Recharge Site between February 1 and December 31, 1999
This product contains time-series data for groundwater level altitudes in bedrock boreholes and meteorological information from a site administered by the U.S. Department of Agriculture (USDA), Agricultural Research Service (ARS). The site, referred to as the Masser Groundwater Recharge Site, is located in the Valley and Ridge Physiographic Province of eastern-central Pennsylvania, USA
Concentrations of Chlorinated Ethene Compounds in Rock Core Collected from the Mudstone Underlying the former Naval Air Warfare Center, West Trenton, New Jersey Concentrations of Chlorinated Ethene Compounds in Rock Core Collected from the Mudstone Underlying the former Naval Air Warfare Center, West Trenton, New Jersey
These data sets present results from the analyses of chlorinated ethene compounds in samples of rock core collected from boreholes in the mudstone underlying the former Naval Air Warfare Center, West Trenton, New Jersey.
Filter Total Items: 69
Water supply in the conterminous United States, Alaska, Hawaii, and Puerto Rico, water years 2010–20 Water supply in the conterminous United States, Alaska, Hawaii, and Puerto Rico, water years 2010–20
We present an assessment of water supply across the conterminous United States (CONUS), Alaska, Hawaii, and Puerto Rico covering water years 2010–20. Our analysis drew on two national hydrologic models, the National Hydrologic Model Precipitation-Runoff Modeling System and the Weather Research and Forecasting model hydrologic modeling system. Both models produced estimates of streamflow
Authors
Galen Gorski, Edward G. Stets, Martha A. Scholl, James R. Degnan, John R. Mullaney, Amy E. Galanter, Anthony J. Martinez, Julie Padilla, Jacob H. LaFontaine, Hayley R. Corson-Dosch, Allen Shapiro
Benefits and cautions in data assimilation strategies: An example of modeling groundwater recharge Benefits and cautions in data assimilation strategies: An example of modeling groundwater recharge
Assimilating recent observations improves model outcomes for real-time assessments of groundwater processes. This is demonstrated in estimating time-varying recharge to a shallow fractured-rock aquifer in response to precipitation. Results from estimating the time-varying water-table altitude (h) and recharge, and their error covariances, are compared for forecasting, filtering, and...
Authors
Allen M. Shapiro, Frederick Day-Lewis
Mapping areas of groundwater susceptible to transient contamination events from rapid infiltration into shallow fractured-rock aquifers in agricultural regions of the conterminous United States Mapping areas of groundwater susceptible to transient contamination events from rapid infiltration into shallow fractured-rock aquifers in agricultural regions of the conterminous United States
Current time-invariant groundwater vulnerability assessments may not capture intermittent contamination events in landscape areas that experience rapid infiltration following precipitation or snowmelt. Occurrences of rapid infiltration and intermittent degradation of groundwater quality are frequently reported in fractured-rock aquifers. This investigation identifies landscape areas...
Authors
Allen M. Shapiro, James A. Falcone
Application of recursive estimation to heat tracing for groundwater/surface-water exchange Application of recursive estimation to heat tracing for groundwater/surface-water exchange
We present and demonstrate a recursive-estimation framework to infer groundwater/surface-water exchange based on temperature time series collected at different vertical depths below the sediment/water interface. We formulate the heat-transport problem as a state-space model (SSM), in which the spatial derivatives in the convection/conduction equation are approximated using finite...
Authors
W. Anderson McAliley, Frederick Day-Lewis, David M. Rey, Martin A. Briggs, Allen M. Shapiro, Dale Werkema
Incorporating snowmelt into daily estimates of recharge using a state-space model of infiltration Incorporating snowmelt into daily estimates of recharge using a state-space model of infiltration
A state-space model (SSM) of infiltration estimates daily groundwater recharge using time-series of groundwater-level altitude and meteorological inputs (liquid precipitation, snowmelt, and evapotranspiration). The model includes diffuse and preferential flow through the unsaturated zone, where preferential flow is a function of liquid precipitation and snowmelt rates and a threshold...
Authors
Allen M. Shapiro, Frederick Day-Lewis, William M. Kappel, John Williams
Reframing groundwater hydrology as a data-driven science Reframing groundwater hydrology as a data-driven science
No abstract available.
Authors
Allen M. Shapiro, F.D. Day-Lewis
Non-USGS Publications**
Pinder, G. F. and Shapiro, A. 1982. Physics of Flow in Geothermal Systems, in Recent Trends in Hydrogeology. ed. T. N. Narasimhan. Geological Society of America, Boulder, CO. p. 25-30. https://doi.org/10.1130/SPE189-p25.
Pinder, G. F. and Shapiro, A. 1979. A new collocation method for the solution of the convection-dominated transport equation. Water Resources Research 15(5): 1177-1182. https://doi.org/10.1029/WR015i005p01177.
Pinder, G. F. and Shapiro, A. 1980. Reply to comment on "A new collocation method for the solution of the convection-dominated transport equation". Water Resources Research 16(6): 1137. https://doi.org/10.1029/WR016i006p01137.
Shapiro, A. and Pinder, G. F. 1981. Analysis of an upstream weighted collocation approximation to the transport equation. Journal of Computational Physics 39(1): 46-71. https://doi.org/10.1016/0021-9991(81)90136-4.
Andersson, J. and Shapiro, A. M. 1983. Stochastic analysis of one-dimensional steady state unsaturated flow: A Comparison of Monte Carlo and Perturbation Methods. Water Resources Research 19(1): 121-133. 10.1029/WR019i001p00121.
Shapiro, A. M. and Andersson, J. 1983. Steady state fluid response in fractured rock: A boundary element solution for a coupled, discrete fracture continuum model. Water Resources Research 19(4): 959-969. 10.1029/WR019i004p00959.
Andersson, J., Shapiro, A. M. and Bear, J. 1984. A Stochastic Model of a Fractured Rock Conditioned by Measured Information. Water Resources Research 20(1): 79-88. 10.1029/WR020i001p00079.
Bear, J. and Shapiro, A. M. 1984. On the shape of the non-steady interface intersecting discontinuities in permeability. Advances in Water Resources 7(3): 106-112. https://doi.org/10.1016/0309-1708(84)90037-X.
Bear, J., Shamir, U., Gamliel, A. and Shapiro, A. M. 1985. Motion of the seawater interface in a coastal aquifer by the method of successive steady states. Journal of Hydrology 76(1): 119-132. https://doi.org/10.1016/0022-1694(85)90093-9.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.