David S Pilliod
My research focuses on species conservation, habitat management, and effectiveness of restoration in a variety of terrestrial and aquatic ecosystems. I also co-lead the Pacific Northwest Environmental DNA Laboratory.
Wildlife Ecology and Conservation Biology Team (FRESC)
Wildlife Ecology and Conservation Biology Team (FRESC)
Pacific Northwest Environmental DNA Laboratory
Pacific Northwest Environmental DNA Laboratory
I lead a team of scientists that develop tools and models to improve understanding of ecological systems and solve challenging problems in natural resource management. We primarily address questions related to species conservation, wildlife habitat, and restoration. We combine molecular methods, remote sensing, field studies, and statistical modeling. Our research team also develops data management and decision support systems to facilitate adaptive management, especially in western rangelands. We primarily work on issues affecting the Intermountain West and Great Basin regions of the U.S.
Professional Experience
2006 - Present: USGS. Forest and Rangeland Ecosystem Science Center, Supervisory Research Ecologist, Boise, Idaho
Education and Certifications
Ph.D., Ecology, Idaho State University, Pocatello, ID (2001)
B.A., Biology, University of California, Santa Cruz, CA (1991)
Science and Products
If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.
Filter Total Items: 137
Performance of quantitative vegetation sampling methods across gradients of cover in Great Basin plant communities Performance of quantitative vegetation sampling methods across gradients of cover in Great Basin plant communities
Resource managers and scientists need efficient, reliable methods for quantifying vegetation to conduct basic research, evaluate land management actions, and monitor trends in habitat conditions. We examined three methods for quantifying vegetation in 1-ha plots among different plant communities in the northern Great Basin: photography-based grid-point intercept (GPI), line-point...
Authors
David S. Pilliod, Robert S. Arkle
Factors influencing detection of eDNA from a stream-dwelling amphibian Factors influencing detection of eDNA from a stream-dwelling amphibian
Environmental DNA (eDNA) methods for detecting and estimating abundance of aquatic species are emerging rapidly, but little is known about how processes such as secretion rate, environmental degradation, and time since colonization or extirpation from a given site affect eDNA measurements. Using stream-dwelling salamanders and quantitative PCR (qPCR) analysis, we conducted three...
Authors
David S. Pilliod, Caren Goldberg, Robert S. Arkle, Lisette Waits
Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples
Environmental DNA (eDNA) methods for detecting aquatic species are advancing rapidly, but with little evaluation of field protocols or precision of resulting estimates. We compared sampling results from traditional field methods with eDNA methods for two amphibians in 13 streams in central Idaho, USA. We also evaluated three water collection protocols and the influence of sampling...
Authors
David S. Pilliod, Caren Goldberg, Robert S. Arkle, Lisette Waits
Terrestrial movement patterns of western pond turtles (Actinemys marmorata) in central California Terrestrial movement patterns of western pond turtles (Actinemys marmorata) in central California
We used radio telemetry to track the terrestrial movements and seasonal habitat use patterns of Western Pond Turtles (Actinemys marmorata) near two ponds in the Carrizo Plain Ecological Reserve, California, USA. We captured 93 turtles in September 2005 and, of these, we tagged three males and six females(weighing > 300 g) with external transmitters. Tagged turtles traveled from 255–1,096...
Authors
David S. Pilliod, Justin L. Welty, Robert Stafford
Application of environmental DNA for inventory and monitoring of aquatic species Application of environmental DNA for inventory and monitoring of aquatic species
This fact sheet was created to help biologists and resource managers understand emerging methods for detecting environmental DNA and their potential application for inventorying and monitoring aquatic species. It is a synthesis of published information.
Authors
David S. Pilliod, Caren Goldberg, Matthew B. Laramie, Lisette Waits
Data entry module and manuals for the Land Treatment Digital Library Data entry module and manuals for the Land Treatment Digital Library
Across the country, public land managers make decisions each year that influence landscapes and ecosystems within their jurisdictions. Many of these decisions involve vegetation manipulations, which often are referred to as land treatments. These treatments include removal or alteration of plant biomass, seeding of burned areas, application of herbicides, and other activities. Data...
Authors
Justin L. Welty, David S. Pilliod
Land Treatment Digital Library Land Treatment Digital Library
The Land Treatment Digital Library (LTDL) was created by the U.S. Geological Survey to catalog legacy land treatment information on Bureau of Land Management lands in the western United States. The LTDL can be used by federal managers and scientists for compiling information for data-calls, producing maps, generating reports, and conducting analyses at varying spatial and temporal scales...
Authors
David S. Pilliod, Justin L. Welty
Ecological impacts of non-native species Ecological impacts of non-native species
Non-native species are considered one of the greatest threats to freshwater biodiversity worldwide (Drake et al. 1989; Allen and Flecker 1993; Dudgeon et al. 2005). Some of the first hypotheses proposed to explain global patterns of amphibian declines included the effects of non-native species (Barinaga 1990; Blaustein and Wake 1990; Wake and Morowitz 1991). Evidence for the impact of...
Authors
David S. Pilliod, R.A. Griffiths, S.L. Kuzmin
Loss and modification of habitat Loss and modification of habitat
Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth...
Authors
Francis Lemckert, Stephen Hecnar, David S. Pilliod
Persistence and extirpation in invaded landscapes: patch characteristics and connectivity determine effects of non-native predatory fish on native salamanders Persistence and extirpation in invaded landscapes: patch characteristics and connectivity determine effects of non-native predatory fish on native salamanders
Studies have demonstrated negative effects of non-native, predatory fishes on native amphibians, yet it is still unclear why some amphibian populations persist, while others are extirpated, following fish invasion. We examined this question by developing habitat-based occupancy models for the long-toed salamander (Ambystoma macrodactylum) and nonnative fish using survey data from 1,749...
Authors
David S. Pilliod, Robert S. Arkle, Bryce Maxell
Index for characterizing post-fire soil environments in temperate coniferous forests Index for characterizing post-fire soil environments in temperate coniferous forests
Many scientists and managers have an interest in describing the environment following a fire to understand the effects on soil productivity, vegetation growth, and wildlife habitat, but little research has focused on the scientific rationale for classifying the post-fire environment. We developed an empirically-grounded soil post-fire index (PFI) based on available science and ecological...
Authors
Theresa Jain, David S. Pilliod, Russell Graham, Leigh Lentile, Jonathan Sandquist
Pattern and process of prescribed fires influence effectiveness at reducing wildfire severity in dry coniferous forests Pattern and process of prescribed fires influence effectiveness at reducing wildfire severity in dry coniferous forests
We examined the effects of three early season (spring) prescribed fires on burn severity patterns of summer wildfires that occurred 1–3 years post-treatment in a mixed conifer forest in central Idaho. Wildfire and prescribed fire burn severities were estimated as the difference in normalized burn ratio (dNBR) using Landsat imagery. We used GIS derived vegetation, topography, and...
Authors
Robert S. Arkle, David S. Pilliod, Justin L. Welty
Non-USGS Publications**
Arkle, R.S., Pilliod, D.S., Strickler, K.M., 2010, Fire, flow and dynamic equilibrium in stream macroinvertebrate communities: Freshwater Biology, v. 55, p. 299-314.
Jain, T.B., Graham, R.T., Pilliod, D.S., 2006, The relation between forest structure and soil burn severity In Andrews, P.L., Butler, B.W., eds., Fuels management: How to measure success, Proceedings: RMRS-P-41, Fort Collins, CO, USDA Forest Service Rocky Mountain Research Station, p. 615-631.
Pilliod, D.S., Bull, E.L., Hayes, J.L., Wales, B.C., 2006, Wildlife and Invertebrate Response to Fuel Reduction Treatments in Dry Coniferous Forests of the Western United States - A Synthesis: USDA, Forest Service, Rocky Mountain Research Station RMRS-GTR-173, p. 34.
Hossack, B.R., Corn, P.S., Pilliod, D.S., 2005, Lack of significant changes in the herpetofauna of Theodore Roosevelt National Park, North Dakota, since the 1920s: American Midland Naturalist, v. 154, p. 423-432.
Funk, W., Blouin, M.S., Corn, P.S., Maxell, B.A., Pilliod, D.S., Amish, S., Allendorf, F.W., 2005, Population structure of Columbia spotted frogs (Rana luteiventris)is strongly affected by the landscape: Molecular Ecology, v. 14, p. 483-496.
Pilliod, D.S., 2005, The Wildlife Habitat Response Model- Environmental Consequences Fact Sheet - 15: USDA Rocky Mountain Research Station RMRS-RN-23-15-WWW, p. 2.
Dunham, J.B., Pilliod, D.S., Young, M., 2004, Assessing the Consequences of Nonnative Trout in Headwater Ecosystems in Western North America: Fisheries, v. 29, no. 6, p. 18-26, https://doi.org/http://dx.doi.org/10.1577/1548-8446(2004)29[18:ATCONT]2.0.CO;2.
Pilliod, D.S., 2004, Wildlife Responses to Fuels Treatments- Key Considerations - Fuels planning- science synthesis and integration; environmental consequences fact sheet 20024: USDA Rocky Mountain Research Station RMRS-RN-23-4WWW, p. 2.
Pilliod, D.S., Peterson, C.R., Ritson, P.I., 2002, Seasonal migration of Columbia spotted frogs (Rana luteiventris) among complementary resources in a high mountain basin: Canadian Journal of Zoology, v. 80, p. 1849-1862.
Peterson, C.R., Burton, S.R., Pilliod, D.S., Lee, J.R., Cossell Jr., J.O., Llewellyn, R.L., 2001, Assessing the accuracy of GAP analysis predicted distributions of Idaho amphibians and reptiles: GAP Analysis Bulletin, v. 10, p. 25-28.
Pilliod, D.S., Peterson, C.R., 2001, Local and landscape effects of introduced trout on amphibians in historically fishless watersheds: Ecosystems, v. 4, p. 322-333.
Pilliod, D.S., Peterson, C.R., 2000, Evaluating effects of fish stocking on amphibian populations in wilderness lakes In Cole, D.N., McCool, S.F., Borrie, W.T., O'Loughlin, J., eds., Wilderness science in a time of change conference—Volume 5: Wilderness ecosystems, threats, and management; 2000 May 23–27; Missoula, MT, Proceedings: RMRS-P-15_VOL-5, Ogden, UT, USDA Forest Service Rocky Mountain Research Station, p. 328-335.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Wildlife Ecology and Conservation Biology Team (FRESC)
Wildlife respond to changes in their environment, some of which are dramatic and others subtle. To fully understand the factors that drive changes in populations and communities, we need better information on wildlife ecology in natural and human-altered landscapes. We conduct research and provide technical assistance to address applied questions about the ecology and conservation of wildlife...
Filter Total Items: 25
If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.
Filter Total Items: 28
No Result Found
If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.
To request an interview, contact fresc_outreach@usgs.gov or call (541) 750-1030.
Filter Total Items: 46
Science and Products
If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.
Filter Total Items: 137
Performance of quantitative vegetation sampling methods across gradients of cover in Great Basin plant communities Performance of quantitative vegetation sampling methods across gradients of cover in Great Basin plant communities
Resource managers and scientists need efficient, reliable methods for quantifying vegetation to conduct basic research, evaluate land management actions, and monitor trends in habitat conditions. We examined three methods for quantifying vegetation in 1-ha plots among different plant communities in the northern Great Basin: photography-based grid-point intercept (GPI), line-point...
Authors
David S. Pilliod, Robert S. Arkle
Factors influencing detection of eDNA from a stream-dwelling amphibian Factors influencing detection of eDNA from a stream-dwelling amphibian
Environmental DNA (eDNA) methods for detecting and estimating abundance of aquatic species are emerging rapidly, but little is known about how processes such as secretion rate, environmental degradation, and time since colonization or extirpation from a given site affect eDNA measurements. Using stream-dwelling salamanders and quantitative PCR (qPCR) analysis, we conducted three...
Authors
David S. Pilliod, Caren Goldberg, Robert S. Arkle, Lisette Waits
Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples Estimating occupancy and abundance of stream amphibians using environmental DNA from filtered water samples
Environmental DNA (eDNA) methods for detecting aquatic species are advancing rapidly, but with little evaluation of field protocols or precision of resulting estimates. We compared sampling results from traditional field methods with eDNA methods for two amphibians in 13 streams in central Idaho, USA. We also evaluated three water collection protocols and the influence of sampling...
Authors
David S. Pilliod, Caren Goldberg, Robert S. Arkle, Lisette Waits
Terrestrial movement patterns of western pond turtles (Actinemys marmorata) in central California Terrestrial movement patterns of western pond turtles (Actinemys marmorata) in central California
We used radio telemetry to track the terrestrial movements and seasonal habitat use patterns of Western Pond Turtles (Actinemys marmorata) near two ponds in the Carrizo Plain Ecological Reserve, California, USA. We captured 93 turtles in September 2005 and, of these, we tagged three males and six females(weighing > 300 g) with external transmitters. Tagged turtles traveled from 255–1,096...
Authors
David S. Pilliod, Justin L. Welty, Robert Stafford
Application of environmental DNA for inventory and monitoring of aquatic species Application of environmental DNA for inventory and monitoring of aquatic species
This fact sheet was created to help biologists and resource managers understand emerging methods for detecting environmental DNA and their potential application for inventorying and monitoring aquatic species. It is a synthesis of published information.
Authors
David S. Pilliod, Caren Goldberg, Matthew B. Laramie, Lisette Waits
Data entry module and manuals for the Land Treatment Digital Library Data entry module and manuals for the Land Treatment Digital Library
Across the country, public land managers make decisions each year that influence landscapes and ecosystems within their jurisdictions. Many of these decisions involve vegetation manipulations, which often are referred to as land treatments. These treatments include removal or alteration of plant biomass, seeding of burned areas, application of herbicides, and other activities. Data...
Authors
Justin L. Welty, David S. Pilliod
Land Treatment Digital Library Land Treatment Digital Library
The Land Treatment Digital Library (LTDL) was created by the U.S. Geological Survey to catalog legacy land treatment information on Bureau of Land Management lands in the western United States. The LTDL can be used by federal managers and scientists for compiling information for data-calls, producing maps, generating reports, and conducting analyses at varying spatial and temporal scales...
Authors
David S. Pilliod, Justin L. Welty
Ecological impacts of non-native species Ecological impacts of non-native species
Non-native species are considered one of the greatest threats to freshwater biodiversity worldwide (Drake et al. 1989; Allen and Flecker 1993; Dudgeon et al. 2005). Some of the first hypotheses proposed to explain global patterns of amphibian declines included the effects of non-native species (Barinaga 1990; Blaustein and Wake 1990; Wake and Morowitz 1991). Evidence for the impact of...
Authors
David S. Pilliod, R.A. Griffiths, S.L. Kuzmin
Loss and modification of habitat Loss and modification of habitat
Amphibians live in a wide variety of habitats around the world, many of which have been modified or destroyed by human activities. Most species have unique life history characteristics adapted to specific climates, habitats (e.g., lentic, lotic, terrestrial, arboreal, fossorial, amphibious), and local conditions that provide suitable areas for reproduction, development and growth...
Authors
Francis Lemckert, Stephen Hecnar, David S. Pilliod
Persistence and extirpation in invaded landscapes: patch characteristics and connectivity determine effects of non-native predatory fish on native salamanders Persistence and extirpation in invaded landscapes: patch characteristics and connectivity determine effects of non-native predatory fish on native salamanders
Studies have demonstrated negative effects of non-native, predatory fishes on native amphibians, yet it is still unclear why some amphibian populations persist, while others are extirpated, following fish invasion. We examined this question by developing habitat-based occupancy models for the long-toed salamander (Ambystoma macrodactylum) and nonnative fish using survey data from 1,749...
Authors
David S. Pilliod, Robert S. Arkle, Bryce Maxell
Index for characterizing post-fire soil environments in temperate coniferous forests Index for characterizing post-fire soil environments in temperate coniferous forests
Many scientists and managers have an interest in describing the environment following a fire to understand the effects on soil productivity, vegetation growth, and wildlife habitat, but little research has focused on the scientific rationale for classifying the post-fire environment. We developed an empirically-grounded soil post-fire index (PFI) based on available science and ecological...
Authors
Theresa Jain, David S. Pilliod, Russell Graham, Leigh Lentile, Jonathan Sandquist
Pattern and process of prescribed fires influence effectiveness at reducing wildfire severity in dry coniferous forests Pattern and process of prescribed fires influence effectiveness at reducing wildfire severity in dry coniferous forests
We examined the effects of three early season (spring) prescribed fires on burn severity patterns of summer wildfires that occurred 1–3 years post-treatment in a mixed conifer forest in central Idaho. Wildfire and prescribed fire burn severities were estimated as the difference in normalized burn ratio (dNBR) using Landsat imagery. We used GIS derived vegetation, topography, and...
Authors
Robert S. Arkle, David S. Pilliod, Justin L. Welty
Non-USGS Publications**
Arkle, R.S., Pilliod, D.S., Strickler, K.M., 2010, Fire, flow and dynamic equilibrium in stream macroinvertebrate communities: Freshwater Biology, v. 55, p. 299-314.
Jain, T.B., Graham, R.T., Pilliod, D.S., 2006, The relation between forest structure and soil burn severity In Andrews, P.L., Butler, B.W., eds., Fuels management: How to measure success, Proceedings: RMRS-P-41, Fort Collins, CO, USDA Forest Service Rocky Mountain Research Station, p. 615-631.
Pilliod, D.S., Bull, E.L., Hayes, J.L., Wales, B.C., 2006, Wildlife and Invertebrate Response to Fuel Reduction Treatments in Dry Coniferous Forests of the Western United States - A Synthesis: USDA, Forest Service, Rocky Mountain Research Station RMRS-GTR-173, p. 34.
Hossack, B.R., Corn, P.S., Pilliod, D.S., 2005, Lack of significant changes in the herpetofauna of Theodore Roosevelt National Park, North Dakota, since the 1920s: American Midland Naturalist, v. 154, p. 423-432.
Funk, W., Blouin, M.S., Corn, P.S., Maxell, B.A., Pilliod, D.S., Amish, S., Allendorf, F.W., 2005, Population structure of Columbia spotted frogs (Rana luteiventris)is strongly affected by the landscape: Molecular Ecology, v. 14, p. 483-496.
Pilliod, D.S., 2005, The Wildlife Habitat Response Model- Environmental Consequences Fact Sheet - 15: USDA Rocky Mountain Research Station RMRS-RN-23-15-WWW, p. 2.
Dunham, J.B., Pilliod, D.S., Young, M., 2004, Assessing the Consequences of Nonnative Trout in Headwater Ecosystems in Western North America: Fisheries, v. 29, no. 6, p. 18-26, https://doi.org/http://dx.doi.org/10.1577/1548-8446(2004)29[18:ATCONT]2.0.CO;2.
Pilliod, D.S., 2004, Wildlife Responses to Fuels Treatments- Key Considerations - Fuels planning- science synthesis and integration; environmental consequences fact sheet 20024: USDA Rocky Mountain Research Station RMRS-RN-23-4WWW, p. 2.
Pilliod, D.S., Peterson, C.R., Ritson, P.I., 2002, Seasonal migration of Columbia spotted frogs (Rana luteiventris) among complementary resources in a high mountain basin: Canadian Journal of Zoology, v. 80, p. 1849-1862.
Peterson, C.R., Burton, S.R., Pilliod, D.S., Lee, J.R., Cossell Jr., J.O., Llewellyn, R.L., 2001, Assessing the accuracy of GAP analysis predicted distributions of Idaho amphibians and reptiles: GAP Analysis Bulletin, v. 10, p. 25-28.
Pilliod, D.S., Peterson, C.R., 2001, Local and landscape effects of introduced trout on amphibians in historically fishless watersheds: Ecosystems, v. 4, p. 322-333.
Pilliod, D.S., Peterson, C.R., 2000, Evaluating effects of fish stocking on amphibian populations in wilderness lakes In Cole, D.N., McCool, S.F., Borrie, W.T., O'Loughlin, J., eds., Wilderness science in a time of change conference—Volume 5: Wilderness ecosystems, threats, and management; 2000 May 23–27; Missoula, MT, Proceedings: RMRS-P-15_VOL-5, Ogden, UT, USDA Forest Service Rocky Mountain Research Station, p. 328-335.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Wildlife Ecology and Conservation Biology Team (FRESC)
Wildlife respond to changes in their environment, some of which are dramatic and others subtle. To fully understand the factors that drive changes in populations and communities, we need better information on wildlife ecology in natural and human-altered landscapes. We conduct research and provide technical assistance to address applied questions about the ecology and conservation of wildlife...
Filter Total Items: 25
If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.
Filter Total Items: 28
No Result Found
If you are unable to access or download a product, email fresc_outreach@usgs.gov a request, including the full citation, or call (541) 750-1030.
To request an interview, contact fresc_outreach@usgs.gov or call (541) 750-1030.
Filter Total Items: 46