Gaia Meigs-Friend
Gaia Meigs-Friend is a Biologist at the USGS Wetland and Aquatic Research Center.
Science and Products
Environmental DNA surveys of Burmese pythons in the Greater Everglades Ecosystem
Improving the probability of detecting invasive giant snakes is vital for the management of emerging or established populations. Burmese pythons occupy thousands of square kilometers of mostly inaccessible habitats in Florida. Environmental DNA (eDNA) methods have been shown to be time and cost effective in a number of systems and may be preferable to traditional detection methods for constrictor
Authors
Caitlin E. Beaver, Gaia Meigs-Friend, Margaret E. Hunter
Environmental DNA (eDNA) detection of nonnative bullseye snakehead in southern Florida
Bullseye Snakehead Channa marulius (Hamilton 1822) was first detected in the southern Florida town of Tamarac in 2000 and has been expanding its geographic range since. Environmental DNA (eDNA) analysis is a newly-developed technique used to noninvasively detect cryptic or low-density species or those that are logistically difficult-to-study. Genetic
material shed into the environment through tis
Authors
Margaret Hunter, Pam Schofield, Gaia Meigs-Friend, Mary Brown, Jason Ferrante
Efficacy of eDNA as an early detection indicator for Burmese pythons in the ARM Loxahatchee National Wildlife Refuge in the Greater Everglades Ecosystem
Environmental DNA (eDNA) detection of invasive species can be used to delimited occupied ranges and estimate probabilities to inform management decisions. Environmental DNA is shed into the environment through skin cells and bodily fluids and can be detected in water samples collected from lakes, rivers, and swamps. In south Florida, invasive Burmese pythons occupy much of the Greater Everglades i
Authors
Margaret Hunter, Gaia Meigs-Friend, Jason Ferrante, Brian Smith, Kristen Hart
Improving eDNA yield and inhibitor reduction through increased water volumes and multi-filter isolation techniques
To inform management and conservation decisions, environmental DNA (eDNA) methods are used to detect genetic material shed into the water by imperiled and invasive species. Methodological enhancements are needed to reduce filter clogging, PCR inhibition, and false-negative detections when eDNA is at low concentrations. In the first of three simple experiments, we sought to ameliorate filter cloggi
Authors
Margaret Hunter, Jason Ferrante, Gaia Meigs-Friend, Amelia Ulmer
Surveys of environmental DNA (eDNA): a new approach to estimate occurrence in Vulnerable manatee populations
Environmental DNA (eDNA) detection is a technique used to non-invasively detect cryptic, low density, or logistically difficult-to-study species, such as imperiled manatees. For eDNA measurement, genetic material shed into the environment is concentrated from water samples and analyzed for the presence of target species. Cytochrome bquantitative PCR and droplet digital PCR eDNA assays were develop
Authors
Margaret Hunter, Gaia Meigs-Friend, Jason A. Ferrante, Aristide Takoukam Kamla, Robert Dorazio, Lucy Keith Diagne, Fabia Luna, Janet M. Lanyon, James P. Reid
Model description and evaluation of the mark-recapture survival model used to parameterize the 2012 status and threats analysis for the Florida manatee (Trichechus manatus latirostris)
This report provides supporting details and evidence for the rationale, validity and efficacy of a new mark-recapture model, the Barker Robust Design, to estimate regional manatee survival rates used to parameterize several components of the 2012 version of the Manatee Core Biological Model (CBM) and Threats Analysis (TA). The CBM and TA provide scientific analyses on population viability of the
Authors
Catherine A. Langtimm, William L. Kendall, Cathy A. Beck, Howard I. Kochman, Amy L. Teague, Gaia Meigs-Friend, Claudia L. Peñaloza
Detection limits of quantitative and digital PCR assays and their influence in presence-absence surveys of environmental DNA
A set of universal guidelines is needed to determine the limit of detection (LOD) in PCR-based analyses of low concentration DNA. In particular, environmental DNA (eDNA) studies require sensitive and reliable methods to detect rare and cryptic species through shed genetic material in environmental samples. Current strategies for assessing detection limits of eDNA are either too stringent or subjec
Authors
Margaret Hunter, Robert M. Dorazio, John S. Butterfield, Gaia Meigs-Friend, Leo Nico, Jason A. Ferrante
Phylogeographic implications for release of critically endangered manatee calves rescued in Northeast Brazil
1. The Antillean manatee (Trichechus manatus manatus), a subspecies of the West Indian manatee, is a large-bodied marine mammal found in fresh, brackish, and marine habitats throughout the Caribbean Islands and Central and South America. Antillean manatees in Brazil are classified as critically endangered, with a census size of approximately 500 individuals. The population in the Northeast region
Authors
Fábia O. Luna, Robert K. Bonde, Fernanda L.N. Attademo, Jonathan W. Saunders, Gaia Meigs-Friend, José Zanon O. Passavante, Margaret E. Hunter
Droplet digital PCR data for environmental DNA surveys of Burmese pythons in the Greater Everglades Ecosystem
Environmental DNA water samples were collected in the Greater Everglades Ecosystem between May 20-22, 2019 and analyzed to estimate Burmese python (Python bivittatus) occurrence. Twenty-eight sites were sampled in the Greater Everglades Ecosystem, with 5 field replicate samples per site, for a total of 140 water samples collected. Python eDNA was detected at 25 of the 28 sampling sites using Dropl
Bullseye snakehead environmental DNA data, and associated attributes, collected from southeast Florida, from 2015-2018
Bullseye snakehead, Channa marulius, was first detected in 2000 in the southern Florida town of Tamarac and has been expanding its geographic range. Environmental DNA (eDNA) analysis is a newly-developed technique used to non-invasively detect cryptic or low-density species, or those that are logistically difficult to study. Genetic material shed into the environment through tissue and body fluid
Burmese python environmental DNA data, and associated attributes, collected from ARM Loxahatchee NWR and surrounding areas, from 2014-2016
Environmental DNA (eDNA) detection of invasive species can be used to delimit occupied ranges and estimate probabilities to inform management decisions. Environmental DNA is shed into the environment through skin cells and bodily fluids and can be detected in water samples collected from lakes, rivers, and swamps. In south Florida, invasive Burmese pythons occupy much of the Greater Everglades in
Droplet digital PCR data from method testing to improve eDNA yield and reduce inhibitors from environmental water samples
Data files for manuscript "Improving eDNA yield and inhibitor reduction through increased water volumes and modified multi-filter isolation techniques". These include the results of different treatments for inhibitor removal from a water sample and DNA yield quantities from such tests.
Environmental DNA (eDNA) methods detect genetic material that is shed into the environment through skin cells
Manatee environmental DNA data, and associated attributes, collected from the United States, Cuba, and Cameroon, from 2013-2015
Environmental DNA (eDNA) detection is a rapidly expanding technique used to non-invasively detect cryptic, low density, or logistically difficult-to-study species, such as imperiled manatees. Genetic material shed into the environment through tissue and body fluids is concentrated from water samples and analyzed for the presence of targeted eDNA. To help delineate manatee habitat ranges, high use
Science and Products
Environmental DNA surveys of Burmese pythons in the Greater Everglades Ecosystem
Improving the probability of detecting invasive giant snakes is vital for the management of emerging or established populations. Burmese pythons occupy thousands of square kilometers of mostly inaccessible habitats in Florida. Environmental DNA (eDNA) methods have been shown to be time and cost effective in a number of systems and may be preferable to traditional detection methods for constrictor
Authors
Caitlin E. Beaver, Gaia Meigs-Friend, Margaret E. Hunter
Environmental DNA (eDNA) detection of nonnative bullseye snakehead in southern Florida
Bullseye Snakehead Channa marulius (Hamilton 1822) was first detected in the southern Florida town of Tamarac in 2000 and has been expanding its geographic range since. Environmental DNA (eDNA) analysis is a newly-developed technique used to noninvasively detect cryptic or low-density species or those that are logistically difficult-to-study. Genetic
material shed into the environment through tis
Authors
Margaret Hunter, Pam Schofield, Gaia Meigs-Friend, Mary Brown, Jason Ferrante
Efficacy of eDNA as an early detection indicator for Burmese pythons in the ARM Loxahatchee National Wildlife Refuge in the Greater Everglades Ecosystem
Environmental DNA (eDNA) detection of invasive species can be used to delimited occupied ranges and estimate probabilities to inform management decisions. Environmental DNA is shed into the environment through skin cells and bodily fluids and can be detected in water samples collected from lakes, rivers, and swamps. In south Florida, invasive Burmese pythons occupy much of the Greater Everglades i
Authors
Margaret Hunter, Gaia Meigs-Friend, Jason Ferrante, Brian Smith, Kristen Hart
Improving eDNA yield and inhibitor reduction through increased water volumes and multi-filter isolation techniques
To inform management and conservation decisions, environmental DNA (eDNA) methods are used to detect genetic material shed into the water by imperiled and invasive species. Methodological enhancements are needed to reduce filter clogging, PCR inhibition, and false-negative detections when eDNA is at low concentrations. In the first of three simple experiments, we sought to ameliorate filter cloggi
Authors
Margaret Hunter, Jason Ferrante, Gaia Meigs-Friend, Amelia Ulmer
Surveys of environmental DNA (eDNA): a new approach to estimate occurrence in Vulnerable manatee populations
Environmental DNA (eDNA) detection is a technique used to non-invasively detect cryptic, low density, or logistically difficult-to-study species, such as imperiled manatees. For eDNA measurement, genetic material shed into the environment is concentrated from water samples and analyzed for the presence of target species. Cytochrome bquantitative PCR and droplet digital PCR eDNA assays were develop
Authors
Margaret Hunter, Gaia Meigs-Friend, Jason A. Ferrante, Aristide Takoukam Kamla, Robert Dorazio, Lucy Keith Diagne, Fabia Luna, Janet M. Lanyon, James P. Reid
Model description and evaluation of the mark-recapture survival model used to parameterize the 2012 status and threats analysis for the Florida manatee (Trichechus manatus latirostris)
This report provides supporting details and evidence for the rationale, validity and efficacy of a new mark-recapture model, the Barker Robust Design, to estimate regional manatee survival rates used to parameterize several components of the 2012 version of the Manatee Core Biological Model (CBM) and Threats Analysis (TA). The CBM and TA provide scientific analyses on population viability of the
Authors
Catherine A. Langtimm, William L. Kendall, Cathy A. Beck, Howard I. Kochman, Amy L. Teague, Gaia Meigs-Friend, Claudia L. Peñaloza
Detection limits of quantitative and digital PCR assays and their influence in presence-absence surveys of environmental DNA
A set of universal guidelines is needed to determine the limit of detection (LOD) in PCR-based analyses of low concentration DNA. In particular, environmental DNA (eDNA) studies require sensitive and reliable methods to detect rare and cryptic species through shed genetic material in environmental samples. Current strategies for assessing detection limits of eDNA are either too stringent or subjec
Authors
Margaret Hunter, Robert M. Dorazio, John S. Butterfield, Gaia Meigs-Friend, Leo Nico, Jason A. Ferrante
Phylogeographic implications for release of critically endangered manatee calves rescued in Northeast Brazil
1. The Antillean manatee (Trichechus manatus manatus), a subspecies of the West Indian manatee, is a large-bodied marine mammal found in fresh, brackish, and marine habitats throughout the Caribbean Islands and Central and South America. Antillean manatees in Brazil are classified as critically endangered, with a census size of approximately 500 individuals. The population in the Northeast region
Authors
Fábia O. Luna, Robert K. Bonde, Fernanda L.N. Attademo, Jonathan W. Saunders, Gaia Meigs-Friend, José Zanon O. Passavante, Margaret E. Hunter
Droplet digital PCR data for environmental DNA surveys of Burmese pythons in the Greater Everglades Ecosystem
Environmental DNA water samples were collected in the Greater Everglades Ecosystem between May 20-22, 2019 and analyzed to estimate Burmese python (Python bivittatus) occurrence. Twenty-eight sites were sampled in the Greater Everglades Ecosystem, with 5 field replicate samples per site, for a total of 140 water samples collected. Python eDNA was detected at 25 of the 28 sampling sites using Dropl
Bullseye snakehead environmental DNA data, and associated attributes, collected from southeast Florida, from 2015-2018
Bullseye snakehead, Channa marulius, was first detected in 2000 in the southern Florida town of Tamarac and has been expanding its geographic range. Environmental DNA (eDNA) analysis is a newly-developed technique used to non-invasively detect cryptic or low-density species, or those that are logistically difficult to study. Genetic material shed into the environment through tissue and body fluid
Burmese python environmental DNA data, and associated attributes, collected from ARM Loxahatchee NWR and surrounding areas, from 2014-2016
Environmental DNA (eDNA) detection of invasive species can be used to delimit occupied ranges and estimate probabilities to inform management decisions. Environmental DNA is shed into the environment through skin cells and bodily fluids and can be detected in water samples collected from lakes, rivers, and swamps. In south Florida, invasive Burmese pythons occupy much of the Greater Everglades in
Droplet digital PCR data from method testing to improve eDNA yield and reduce inhibitors from environmental water samples
Data files for manuscript "Improving eDNA yield and inhibitor reduction through increased water volumes and modified multi-filter isolation techniques". These include the results of different treatments for inhibitor removal from a water sample and DNA yield quantities from such tests.
Environmental DNA (eDNA) methods detect genetic material that is shed into the environment through skin cells
Manatee environmental DNA data, and associated attributes, collected from the United States, Cuba, and Cameroon, from 2013-2015
Environmental DNA (eDNA) detection is a rapidly expanding technique used to non-invasively detect cryptic, low density, or logistically difficult-to-study species, such as imperiled manatees. Genetic material shed into the environment through tissue and body fluids is concentrated from water samples and analyzed for the presence of targeted eDNA. To help delineate manatee habitat ranges, high use