Jessica M. Rieder, PhD (Former Employee)
Science and Products
A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists
Ecologists, biologists, and conservation scientists are increasingly interested in the use of environmental DNA (eDNA) data for research and potentially decision-making. While commercial DNA extraction kits are typically user-friendly and accessible, they may fail to deliver the desired results with inherently complex eDNA samples, necessitating protocol optimization or educated...
Authors
Jessica Marie Rieder, Eliane Jemmi, Margaret Hunter, Irene Adrian-Kalchhauser
Non-USGS Publications**
Rieder, J.M. (2011). An evaluation of two environmental acts: The national environmental policy act and the environment protection and biodiversity conservation act. Asia Pacific Journal of Environmental Law, 14, 105.
Humbel, F.*, Rieder, J. H.*, Franc, Y., Juillerat, P., Scharl, M., Misselwitz, B., Schreiner, P., Begré, S., Rogler, G., von Känel, R., Yilmaz, B., Biedermann, L., & Swiss IBD Cohort Study Group. (2019). Association of Alterations in Intestinal Microbiota With Impaired Psychological Function in Patients With Inflammatory Bowel Diseases in Remission. Clinical Gastroenterology and Hepatology: The Official Clinical Practice Journal of the American Gastroenterological Association, 18(9), Article 9. https://doi.org/10.1016/j.cgh.2019.09.022
Rieder, J. M., Vonlanthen, P., Seehausen, O., & Lucek, K. (2019). Allopatric and sympatric diversification within roach (Rutilus rutilus) of large pre-alpine lakes. Journal of Evolutionary Biology, 32(11), Article 11. https://doi.org/10.1111/jeb.13502
Kernen, L., Rieder, J., Duus, A., Holbech, H., Segner, H., & Bailey, C. (2020). Thymus development in the zebrafish (Danio rerio) from an ecoimmunology perspective. Journal of Experimental Zoology Part A: Ecological and Integrative Physiology, 333(10), Article 10. https://doi.org/10.1002/jez.2435
Rieder, J.*, Martin-Sanchez, P. M.*, Osman, O. A., Adrian-Kalchhauser, I., & Eiler, A. (2022). Detecting aquatic pathogens with field-compatible dried qPCR assays. Journal of Microbiological Methods, 202, 106594. https://doi.org/10.1016/j.mimet.2022.106594
Rieder, J., Kapopoulou, A., Bank, C., & Adrian-Kalchhauser, I. (2023). Metagenomics and metabarcoding experimental choices and their impact on microbial community characterization in freshwater recirculating aquaculture systems. Environmental Microbiome, 18(1), 8. https://doi.org/10.1186/s40793-023-00459-z
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Science and Products
A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists
Ecologists, biologists, and conservation scientists are increasingly interested in the use of environmental DNA (eDNA) data for research and potentially decision-making. While commercial DNA extraction kits are typically user-friendly and accessible, they may fail to deliver the desired results with inherently complex eDNA samples, necessitating protocol optimization or educated...
Authors
Jessica Marie Rieder, Eliane Jemmi, Margaret Hunter, Irene Adrian-Kalchhauser
Non-USGS Publications**
Rieder, J.M. (2011). An evaluation of two environmental acts: The national environmental policy act and the environment protection and biodiversity conservation act. Asia Pacific Journal of Environmental Law, 14, 105.
Humbel, F.*, Rieder, J. H.*, Franc, Y., Juillerat, P., Scharl, M., Misselwitz, B., Schreiner, P., Begré, S., Rogler, G., von Känel, R., Yilmaz, B., Biedermann, L., & Swiss IBD Cohort Study Group. (2019). Association of Alterations in Intestinal Microbiota With Impaired Psychological Function in Patients With Inflammatory Bowel Diseases in Remission. Clinical Gastroenterology and Hepatology: The Official Clinical Practice Journal of the American Gastroenterological Association, 18(9), Article 9. https://doi.org/10.1016/j.cgh.2019.09.022
Rieder, J. M., Vonlanthen, P., Seehausen, O., & Lucek, K. (2019). Allopatric and sympatric diversification within roach (Rutilus rutilus) of large pre-alpine lakes. Journal of Evolutionary Biology, 32(11), Article 11. https://doi.org/10.1111/jeb.13502
Kernen, L., Rieder, J., Duus, A., Holbech, H., Segner, H., & Bailey, C. (2020). Thymus development in the zebrafish (Danio rerio) from an ecoimmunology perspective. Journal of Experimental Zoology Part A: Ecological and Integrative Physiology, 333(10), Article 10. https://doi.org/10.1002/jez.2435
Rieder, J.*, Martin-Sanchez, P. M.*, Osman, O. A., Adrian-Kalchhauser, I., & Eiler, A. (2022). Detecting aquatic pathogens with field-compatible dried qPCR assays. Journal of Microbiological Methods, 202, 106594. https://doi.org/10.1016/j.mimet.2022.106594
Rieder, J., Kapopoulou, A., Bank, C., & Adrian-Kalchhauser, I. (2023). Metagenomics and metabarcoding experimental choices and their impact on microbial community characterization in freshwater recirculating aquaculture systems. Environmental Microbiome, 18(1), 8. https://doi.org/10.1186/s40793-023-00459-z
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.