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Publications

Read publications and other informational products to learn more about USGS science occurring in the Mississippi Basin.

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Ecotoxicological effects of crude oil to early life stage Danio rerio: A molecular, morphological and behavioral approach focused on swim bladder development Ecotoxicological effects of crude oil to early life stage Danio rerio: A molecular, morphological and behavioral approach focused on swim bladder development

Proper development and inflation of the swim bladder is essential for swimming and foraging behavior in fish. To characterize the effects of the Brazilian oil spill that occurred between 2019 and 2020 to early life stage fish, the expression of genes involved in swim bladder development were targeted, with biochemical assays, morphology, and behavior assessed. The swim bladder was...
Authors
Célio F. Mariz, Maria Karolaine de Melo Alves, Jason Tyler Magnuson, Italo Braga de Castro, Felix Augusto Silva de Andrade, Eliete Zanardi-Lamardo, Igor Dias Medeiros, Paulo S. Carvalho

Occurrence and tissue distribution of per- and polyfluoroalkyl substances (PFAS) in fishes from waterbodies with point and non-point sources in Massachusetts, USA Occurrence and tissue distribution of per- and polyfluoroalkyl substances (PFAS) in fishes from waterbodies with point and non-point sources in Massachusetts, USA

Per- and polyfluoroalkyl substances (PFAS) are persistent environmental contaminants with known bioaccumulative and toxic effects in aquatic ecosystems. This study assessed site-specific differences in PFAS contamination in fish from Ashumet Pond, Sudbury River, and Great Herring Pond (reference site) in Massachusetts. Fish from Ashumet Pond exhibited the highest PFAS concentrations...
Authors
Heather L. Walsh, Vicki S. Blazer, Emma Lord, Stephen T. Hurley, Denis R. LeBlanc

Perfluorodecanesulfonate (PFDS) induces innate immune toxicity through the NF-κB pathway in early life stage zebrafish Perfluorodecanesulfonate (PFDS) induces innate immune toxicity through the NF-κB pathway in early life stage zebrafish

Perfluorodecanesulfonate (PFDS), a long-chain polyfluoroalkyl substance (PFAS), is widely detected in aquatic environments and increasingly recognized for its environmental persistence and bioaccumulative potential; however, its immunotoxicity remains poorly understood in aquatic biota. In this study, early life stage zebrafish (Danio rerio) were exposed to environmentally relevant...
Authors
Chengwei Zhou, Wei Cheng, Rongrong Xuan, Xinyuan Kang, Jiazhen Wang, Jason Tyler Magnuson, Jialin Li, Di Fang, Wenhui Qiu

Multi-sensor proximal remote sensing for cover crop biomass estimation at high and moderate spatial resolutions Multi-sensor proximal remote sensing for cover crop biomass estimation at high and moderate spatial resolutions

Cover crops play a critical role in providing agroecological services such as improving soil health, reducing erosion and nitrogen loss, and suppressing weeds, which are closely tied to their performance such as accumulated biomass. This study evaluated the Active Canopy Sensor (ACS) -214, an active proximal sensing device equipped with its own light-emitting red and near-infrared...
Authors
Jyoti Jennewein, Brian W. Davis, S. Seehaver-Eagan, J. Nicolette, J. Pittman, W. Dean Hively, Avi Goldsmith, C. Hidalgo, C. Reberg-Horton, S.B. Mirsky

Sensitivity of mayfly Neocloeon triangulifer to a reference toxicant is significantly impacted by the age of the diatom feed species Navicula pelliculosa Sensitivity of mayfly Neocloeon triangulifer to a reference toxicant is significantly impacted by the age of the diatom feed species Navicula pelliculosa

The development of standardized toxicity tests is critical for assessing pollutants in aquatic ecosystems. The mayfly Neocloeon triangulifer offers advantages as a test species due to its asexual reproduction, short life cycle, and high sensitivity to pollutants. However, we identified variability in response sensitivity to pollutants, which may stem from the nutritional composition and...
Authors
Moira M. Ijzerman, Melanie J. Gallant, David J. Soucek, Rebecca A. Consbrock, Heather Roshon, Jacob Gawronski, Paul K. Sibley, Ryan S. Prosser

Invasive species in the aquarium trade: Survey of attitudes, behaviors, and knowledge among US participants Invasive species in the aquarium trade: Survey of attitudes, behaviors, and knowledge among US participants

Although the aquarium trade is an important pathway for direct and indirect non-native species introductions into freshwater systems, knowledge and attitudes of participants in the trade regarding alien species issues is largely undocumented. Therefore, we administered a survey to investigate attitudes and behaviors of aquarists and non-aquarists regarding the aquarium trade as a pathway...
Authors
Joseph V. Brown, William E. Kelso, Diaz Rodrigo, Wesley Daniel, Haley M. Brassard, Michael D. Kaller

Incidence of pollution, bioaccumulation, biomagnification, and toxic effects of per- and polyfluoroalkyl substances (PFAS) in aquatic ecosystems: A review Incidence of pollution, bioaccumulation, biomagnification, and toxic effects of per- and polyfluoroalkyl substances (PFAS) in aquatic ecosystems: A review

Per- and polyfluoroalkyl substances (PFAS) are persistently accumulated in both environmental media and biological systems, leading to significant toxicological effects. Although research on PFAS has expanded in recent years, systematic reviews on its concentration distribution in aquatic environments and biota, as well as its toxicological effects, remain scarce. Moreover, existing...
Authors
Cunlong Wang, Jason Tyler Magnuson, Chunmiao Zheng, Wenhui Qiu

Hydraulic conductivity and transmissivity estimates from slug tests in wells within the Mississippi Alluvial Plain, Arkansas and Mississippi, 2020 Hydraulic conductivity and transmissivity estimates from slug tests in wells within the Mississippi Alluvial Plain, Arkansas and Mississippi, 2020

During the spring and summer of 2020, the U.S. Geological Survey conducted single-well slug tests on selected observation wells within the Mississippi Alluvial Plain in Arkansas and Mississippi to estimate hydraulic conductivity and transmissivity values for the Mississippi River Valley alluvial and middle Claiborne aquifers. Well and aquifer data were collected from field measurements...
Authors
Aaron L. Pugh

Pyrethroid insecticides implicated in mass mortality of monarch butterflies at an overwintering site in California Pyrethroid insecticides implicated in mass mortality of monarch butterflies at an overwintering site in California

Since the 1980s, monarch butterfly (Danaus plexippus plexippus) populations across North America have declined by 80–95%. Although several studies have implicated pesticides as a contributing factor to their population declines, our understanding of monarch exposure levels in nature remains limited. In January 2024, a mass mortality event near an overwintering site in Pacific Grove...
Authors
Staci Cibotti, Michelle L. Hladik, Emily May, Emma Pelton, Timothy Bargar, Natalie Johnston, Aimee Code

Isotopic niche plasticity of American alligators within the southern Everglades Isotopic niche plasticity of American alligators within the southern Everglades

Hydrologic alterations within the Everglades have degraded American alligator (Alligator mississippiensis) habitat, reduced prey base, and increased physiological stress. Alligator body condition declined across many management areas from 2000 through 2014, prompting us to investigate the relationship between their intraspecific isotopic niche dynamics and body condition. Alligators...
Authors
Mathew Denton, Michael Cherkiss, Frank J. Mazzotti, Laura A. Brandt, Sidney T. Godfrey, Darren Johnson, Kristen Hart

Assessment and validation of depressions in digital elevation models from multiple elevation data sources and delineation of depressions, sinking streams, and their watersheds in Tennessee and parts of Kentucky, Virginia, North Carolina, Georgia, Alabama, Assessment and validation of depressions in digital elevation models from multiple elevation data sources and delineation of depressions, sinking streams, and their watersheds in Tennessee and parts of Kentucky, Virginia, North Carolina, Georgia, Alabama,

Closed depressions and sinking streams in karst landscapes pose difficulties for water-resources management, in the construction of roads and other public works, and in hydrologic and hydrogeomorphic analyses. Digital elevation models (DEMs) can be used to identify the location and determine the size and shape of closed depressions, but separating artificial depressions due to error from...
Authors
David E. Ladd, John K. Carmichael
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