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Data

Our interdisciplinary, integrated science teams develop various data sets in support of the USGS mission areas. This information then aids natural resource managers in decision making and support of the complex issues they face in today's world. The data and tools listed here are official USGS data releases.

Filter Total Items: 387

Occurrence data and models for woody riparian native and invasive plant species in the conterminous western USA Occurrence data and models for woody riparian native and invasive plant species in the conterminous western USA

We developed habitat suitability models for occurrence of three invasive riparian woody plant taxa of concern to Department of Interior land management agencies, as well as for three dominant native riparian woody taxa. Study taxa were non-native tamarisk (saltcedar; Tamarix ramosissima, Tamarix chinensis), Russian olive (Elaeagnus angustifolia) and Siberian elm (Ulmus pumila) and native...

Microbial nitrification gene data (ammonia monoxygenase, or amoA) from alpine glacial and snow-fed headwater ecosystems Microbial nitrification gene data (ammonia monoxygenase, or amoA) from alpine glacial and snow-fed headwater ecosystems

These data describe how microorganisms facilitate the cycling of reactive nitrogen in alpine ecosystems. Samples of water and sediment were collected from a longitudinal study of Loch Vale watershed in Rocky Mountain National Park in 2011 and 2012. Data presented include concentrations of NO3+ and NH4+ of surface waters and the relative abundance of nitrifying bacteria in both the water...

Soil and surface water nitrogen and caffeine data from 2019, and 2019-2020 trail counts of hikers in Loch Vale Watershed, Rocky Mountain National Park Soil and surface water nitrogen and caffeine data from 2019, and 2019-2020 trail counts of hikers in Loch Vale Watershed, Rocky Mountain National Park

Daily visitor use in Rocky Mountain National Park has increased substantially since 2014, raising questions about the impact of human waste on water quality in popular areas without latrines. Human urine contributes nitrogen, and the ecological and biogeochemical effects of nitrogen from atmospheric deposition have long been the topic of study in Loch Vale watershed, Rocky Mountain...

INHABIT species potential distribution across the contiguous United States (ver. 3.0, February 2023) INHABIT species potential distribution across the contiguous United States (ver. 3.0, February 2023)

We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models...

Hierarchically nested and biologically relevant range-wide monitoring frameworks for greater sage-grouse, western United States Hierarchically nested and biologically relevant range-wide monitoring frameworks for greater sage-grouse, western United States

We produced 13 hierarchically nested cluster levels that reflect the results from developing a hierarchical monitoring framework for greater sage-grouse across the western United States. Polygons (clusters) within each cluster level group a population of sage-grouse leks (sage-grouse breeding grounds) and each level increasingly groups lek clusters from previous levels. We developed the

popcluster: hierarchical population monitoring frameworks, Version 2.0.0 popcluster: hierarchical population monitoring frameworks, Version 2.0.0

We developed a method to construct hierarchically nested and biologically relevant groupings of similar habitats associated with field surveys while considering structure/connectedness (movements between habitats). This approach can support mobile species using high fidelity sites where monitoring during surveys occurs, such as birthing grounds, breeding grounds, or stopovers/seasonal...

Spatial scale selection for greater sage-grouse population trends, Version 1.0.0 Spatial scale selection for greater sage-grouse population trends, Version 1.0.0

The distance within which populations respond to features in a landscape (scale of effect) can indicate how disturbance and management may affect wildlife. Using annual counts of male greater sage-grouse (Centrocercus urophasianus) attending 584 leks in southwest Wyoming (2003-2019) and estimates of sagebrush (Artemisia spp.) cover from a remote sensing product (Rigge et al., 2021...

Habitat suitability models for understory shrubs of western North America Habitat suitability models for understory shrubs of western North America

These data provide current and future projected habitat distribution models for four shrub species: beaked hazelnut (Corylus cornuta), Oregon grape (Mahonia aquifolium), salal (Gaultheria shallon), and black huckleberry, (Vaccinium membranaceum), as well as a current projected habitat distribution model for evergreen huckleberry (Vaccinium ovatum). Each raster file represents the...

Data to create and evaluate distribution models for invasive species for different geographic extents Data to create and evaluate distribution models for invasive species for different geographic extents

We developed habitat suitability models for invasive plant species selected by Department of Interior land management agencies. We applied the modeling workflow developed in Young et al. 2020 to species not included in the original case studies. Our methodology balanced trade-offs between developing highly customized models for a few species versus fitting non-specific and generic models...

Microsatellite data, boundaries of subpopulation centers, and estimated effective migration for greater sage-grouse collected in western North America between 1992 and 2015 (ver. 2.0, December 2022) Microsatellite data, boundaries of subpopulation centers, and estimated effective migration for greater sage-grouse collected in western North America between 1992 and 2015 (ver. 2.0, December 2022)

Greater Sage-grouse were sampled for genetic analysis with the goal of quantifying genetic structure and gene flow across the entire species range in the U.S. and Canada. Data presented here consist of two data sets both including genetic data from 15 microsatellite markers. Most samples were collected between 2005 and 2015 (feathers collected non-invasively off the ground) yet some...

Size distribution and reproductive data of the invasive Burmese python (Python molurus bivittatus) in the Greater Everglades Ecosystem, Florida, USA, 1995-2021 Size distribution and reproductive data of the invasive Burmese python (Python molurus bivittatus) in the Greater Everglades Ecosystem, Florida, USA, 1995-2021

This dataset contains morphometric information from Burmese pythons collected from an invasive population in southern Florida between 1995-2021. Scientists from the U.S. Geological Survey and the National Park Service curated this dataset as a repository for records of Burmese pythons found on or nearby federal lands in southern Florida, including Everglades National Park, Big Cypress...

A reference genome assembly for the endangered Aga or Mariana Crow (Corvus kubaryi) A reference genome assembly for the endangered Aga or Mariana Crow (Corvus kubaryi)

The Aga, also known as the Mariana Crow, is an endangered endemic crow of the Northern Mariana Islands, a Commonwealth of the United States of America. The only known population currently extant is on the island of Rota and has been in decline over the past two decades. Unknown pathogens are among the factors that may be contributing to this decline. To support metagenomic and...
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