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Publications

This is a list of publications written by Patuxent employees since Patuxent opened in 1939.  To search for Patuxent's publications by author or title, please click below to go to the USGS Publication Warehouse.

Filter Total Items: 8128

Assessing the risks posed by SARS-CoV-2 in and via North American bats — Decision framing and rapid risk assessment Assessing the risks posed by SARS-CoV-2 in and via North American bats — Decision framing and rapid risk assessment

The novel β-coronavirus, SARS-CoV-2, may pose a threat to North American bat populations if bats are exposed to the virus through interaction with humans, if the virus can subsequently infect bats and be transmitted among them, and if the virus causes morbidity or mortality in bats. Further, if SARS-CoV-2 became established in bat populations, it could possibly serve as a source for new...
Authors
Michael C. Runge, Evan H. Campbell Grant, Jeremy T. H. Coleman, Jonathan D. Reichard, Samantha E.J. Gibbs, Paul M. Cryan, Kevin J. Olival, Daniel P. Walsh, David S. Blehert, M. Camille Hopkins, Jonathan M. Sleeman

Identifying research needs to inform white-nose syndrome management decisions Identifying research needs to inform white-nose syndrome management decisions

Ecological understanding of host–pathogen dynamics is the basis for managing wildlife diseases. Since 2008, federal, state, and provincial agencies and tribal and private organizations have collaborated on bat and white‐nose syndrome (WNS) surveillance and monitoring, research, and management programs. Accordingly, scientists and managers have learned a lot about the hosts, pathogen, and...
Authors
Riley Bernard, Jonathan D. Reichard, Jeremy T. H. Coleman, Julie C. Blackwood, Michelle L. Verant, Jordi Segers, Jeffery M. Lorch, John Paul White, M.S. Moore, Amy L. Russell, Rachel A. Katz, Daniel L. Linder, Rick S. Toomey, Gregory G. Turner, Winifred F. Frick, Maarten J. Vonhof, Craig K. R. Willis, Evan H. Campbell Grant

A revised classification of the Xolmiini (Aves: Tyrannidae: Fluvicolinae), including a new genus for Muscisaxicola fluviatilis A revised classification of the Xolmiini (Aves: Tyrannidae: Fluvicolinae), including a new genus for Muscisaxicola fluviatilis

Recent studies using molecular phylogenetics have provided new insight into the composition of and relationships among species in the avian tribe Xolmiini. Key findings include the paraphyly of Xolmis, including the exclusion of X. dominicanus from the Xolmiini, and the apparent paraphyly of Muscisaxicola. We provide a revised classification of the Xolmiini, including a new genus for...
Authors
R. Terry Chesser, Michael G Harvey, Robb T Brumfield, Elizabeth P Derryberry

Rethinking foundation species in a changing world: The case for Rhododendron maximum as an emerging foundation species in shifting ecosystems of the southern Appalachians Rethinking foundation species in a changing world: The case for Rhododendron maximum as an emerging foundation species in shifting ecosystems of the southern Appalachians

“Foundation species” are widespread, abundant species that play critical roles in structuring ecosystem characteristics and processes. Ecosystem change in response to human activities, climate change, disease introduction, or other environmental conditions may promote the emergence of new foundation species or the decline of previously important foundation species. We present...
Authors
Maura P. Dudley, Mary Freeman, Seth J. Wenger, C. Rhett Jackson, Catherine M. Pringle

Freshwater crabs (Decapoda: Pseudothelphusidae) increase rates of leaf breakdown in a neotropical headwater stream Freshwater crabs (Decapoda: Pseudothelphusidae) increase rates of leaf breakdown in a neotropical headwater stream

Freshwater crabs are the largest macroconsumers in many neotropical headwater streams, but few studies have examined their roles in ecosystem processes such as leaf litter breakdown. As omnivorous macroconsumers, freshwater crabs affect multiple trophic levels. They may directly increase leaf breakdown through fragmentation and consumption or indirectly decrease breakdown by consuming...
Authors
Carol Yang, Seth J. Wenger, Amanda Rugenski, Ingo S. Wehrtmann, Scott Connelly, Mary Freeman

Decision analysis for managing public natural resources Decision analysis for managing public natural resources

Examples like the Grand Canyon story are becoming more common—agencies and stakeholders are increasingly using decision tools to help navigate complex decisions regarding natural resources. Several books and many papers have made the case for the use of decision analysis in natural resource management settings and have described the tools available (Conroy and Peterson 2013; Gregory et...
Authors
Michael C. Runge, Ellen A Bean

Introduction to risk analysis Introduction to risk analysis

Many decisions are made in the face of uncertainty that either cannot or will not be reduced, and the challenge to the decision maker is how to manage the risk imposed by that uncertainty. This chapter will introduce the field of risk analysis, focusing on both the scientific tasks (estimating the probabilities and magnitudes of possible outcomes) and the policy-relevant value judgments...
Authors
Michael C. Runge, Sarah J. Converse

Allocating funds under the National Fish Habitat Action Plan Allocating funds under the National Fish Habitat Action Plan

Each year, the Director of the U.S. Fish and Wildlife Service (Service), with advice from a Fisheries Management Team, allocates funding to support the National Fish Habitat Action Plan. The Service distributes the funds to Fish Habitat Partnerships (FHPs), who, in turn, undertake projects that “protect, restore, or enhance fish and aquatic habitats or otherwise directly support habitat...
Authors
Michael C. Runge

Introduction to linked and dynamic decisions Introduction to linked and dynamic decisions

Often, a decision maker is faced with a series of linked decisions, rather than an isolated one-off decision. In natural resource management, it is common to make a similar type of decision on a regular basis (e.g., annually). Such linked decisions have two important properties: they are dynamic, that is, the actions taken early on affect immediate outcomes as well as the effects of...
Authors
Michael C. Runge

Introduction to resource allocation Introduction to resource allocation

With ongoing habitat loss and degradation, ever-increasing threats to biodiversity, and limited funding for conservation and management, nearly every natural resource manager routinely faces difficult resource allocation problems. Funding and capacity for natural resource management rarely meet the need, and informed resource allocations are increasingly important. These decision...
Authors
James E. Lyons

Resource allocation for coastal wetland management: Confronting uncertainty about sea level rise Resource allocation for coastal wetland management: Confronting uncertainty about sea level rise

Coastal wetlands are rich and diverse ecosystems with a wide variety of birdlife and other natural resources. Decision making for coastal wetland management is difficult given the complex nature of these ecological systems and the frequent need to meet multiple objectives for varied resources. Management challenges in the coastal zone are exacerbated by uncertainty about sea level rise...
Authors
James E. Lyons, Kevin S. Kalasz, Gregory Breese, Clint W. Boal

Applications and utility of the surface elevation table–marker horizon method for measuring wetland elevation and shallow soil subsidence-expansion: Discussion/reply to: Byrnes M., Britsch L., Berlinghoff J., Johnson R., and Khalil S. 2019. Recent subside Applications and utility of the surface elevation table–marker horizon method for measuring wetland elevation and shallow soil subsidence-expansion: Discussion/reply to: Byrnes M., Britsch L., Berlinghoff J., Johnson R., and Khalil S. 2019. Recent subside

Byrnes et al. (Geo-Marine Letters 39:265–278, Byrnes et al. 2019) present subsidence data for Barataria Basin located south and west of New Orleans in coastal Louisiana to better inform wetland protection and restoration planning by the Louisiana Coastal Protection and Restoration Authority. They measured subsidence using geodetic GPS elevation surveys of rod benchmarks, similar to the...
Authors
Donald Cahoon, Denise Reed, John W. Day, James C. Lynch, Andrew Swales, Robert R. Lane
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