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Publications

This is a list of publications written by Patuxent employees since Patuxent opened in 1939.  To search for Patuxent's publications by author or title, please click below to go to the USGS Publication Warehouse.

Filter Total Items: 8128

Accounting for non-independent detection when estimating abundance of organisms with a Bayesian approach Accounting for non-independent detection when estimating abundance of organisms with a Bayesian approach

Summary 1. Binomial mixture models use repeated count data to estimate abundance. They are becoming increasingly popular because they provide a simple and cost‐effective way to account for imperfect detection. However, these models assume that individuals are detected independently of each other. This assumption may often be violated in the field. For instance, manatees (Trichechus...
Authors
Julien Martin, J. Andrew Royle, Darryl I. MacKenzie, Holly H. Edwards, Marc Kery, Beth Gardner

Spatial patch occupancy patterns of the Lower Keys marsh rabbit Spatial patch occupancy patterns of the Lower Keys marsh rabbit

Reliable estimates of presence or absence of a species can provide substantial information on management questions related to distribution and habitat use but should incorporate the probability of detection to reduce bias. We surveyed for the endangered Lower Keys marsh rabbit (Sylvilagus palustris hefneri) in habitat patches on 5 Florida Key islands, USA, to estimate occupancy and...
Authors
Mitchell J. Eaton, Phillip T. Hughes, James D. Nichols, Anne Morkill, Chad Anderson

An adaptive decision framework for the conservation of a threatened plant An adaptive decision framework for the conservation of a threatened plant

Mead's milkweed Asclepias meadii, a long-lived perennial herb of tallgrass prairie and glade communities of the central United States, is a species designated as threatened under the U.S. Endangered Species Act. Challenges to its successful management include the facts that much about its life history is unknown, its age at reproductive maturity is very advanced, certain life stages are
Authors
Clinton T. Moore, Christopher J. Fonnesbeck, Katriona Shea, Kristopher J. Lah, Paul M. McKenzie, Lianne C. Ball, Michael C. Runge, Helen M. Alexander

Modelling community dynamics based on species-level abundance models from detection/nondetection data Modelling community dynamics based on species-level abundance models from detection/nondetection data

1. In large‐scale field surveys, a binary recording of each species’ detection or nondetection has been increasingly adopted for its simplicity and low cost. Because of the importance of abundance in many studies, it is desirable to obtain inferences about abundance at species‐, functional group‐, and community‐levels from such binary data. 2. We developed a novel hierarchical multi...
Authors
Yuichi Yamaura, J. Andrew Royle, Kouji Kuboi, Tsuneo Tada, Susumu Ikeno, Shun’ichi Makino

Adaptive management of bull trout populations in the Lemhi Basin Adaptive management of bull trout populations in the Lemhi Basin

The bull trout Salvelinus confluentus, a stream-living salmonid distributed in drainages of the northwestern United States, is listed as threatened under the Endangered Species Act because of rangewide declines. One proposed recovery action is the reconnection of tributaries in the Lemhi Basin. Past water use policies in this core area disconnected headwater spawning sites from...
Authors
Andrew J. Tyre, James T. Peterson, Sarah J. Converse, Tiffany L. Bogich, Damien Miller, Max Post van der Burg, Carmen Thomas, Ralph J. Thompson, Jeri Wood, Donna Brewer, Michael C. Runge

Modelling the distribution of chickens, ducks, and geese in China Modelling the distribution of chickens, ducks, and geese in China

Global concerns over the emergence of zoonotic pandemics emphasize the need for high-resolution population distribution mapping and spatial modelling. Ongoing efforts to model disease risk in China have been hindered by a lack of available species level distribution maps for poultry. The goal of this study was to develop 1 km resolution population density models for China's chickens...
Authors
Diann J. Prosser, Junxi Wu, Erie C. Ellis, Fred Gale, Thomas P. Van Boeckel, William Wint, Tim Robinson, Xiangming Xiao, Marius Gilbert

Revisiting 'Beyond Leave No Trace' Revisiting 'Beyond Leave No Trace'

No abstract available.
Authors
Jeffrey L. Marion, Ben Lawhon, Wade M. Vagias, Peter Newman

Enhanced decomposition offsets enhanced productivity and soil carbon accumulation in coastal wetlands responding to climate change Enhanced decomposition offsets enhanced productivity and soil carbon accumulation in coastal wetlands responding to climate change

Coastal wetlands are responsible for about half of all carbon burial in oceans, and their persistence as a valuable ecosystem depends largely on the ability to accumulate organic material at rates equivalent to relative sea level rise. Recent work suggests that elevated CO2 and temperature warming will increase organic matter productivity and the ability of marshes to survive sea level...
Authors
M. L. Kirwan, L. K. Blum

Relating injury to the forest ecosystem near Palmerton, PA, to zinc contamination from smelting Relating injury to the forest ecosystem near Palmerton, PA, to zinc contamination from smelting

The forest on Blue Mountain, near Lehigh Gap, has been injured by emissions from two historical zinc (Zn) smelters in Palmerton, PA, located at the northern base of the mountain. The uppermost mineral soil and lower litter from sites along a transect, just south of the ridgetop, contained from 64 to 4400 mg/kg Zn. We measured forest metrics at 15 sampling sites to ascertain how forest...
Authors
W. Nelson Beyer, Cairn Krafft, Stephen Klassen, Carrie E. Green, Rufus L. Chaney

Rapid wetland expansion during European settlement and its implication for marsh survival under modern sediment delivery rates Rapid wetland expansion during European settlement and its implication for marsh survival under modern sediment delivery rates

Fluctuations in sea-level rise rates are thought to dominate the formation and evolution of coastal wetlands. Here we demonstrate a contrasting scenario in which land-use–related changes in sediment delivery rates drive the formation of expansive marshland, and vegetation feedbacks maintain their morphology despite recent sediment supply reduction. Stratigraphic analysis and radiocarbon...
Authors
Matthew L. Kirwan, A. Brad Murray, Jeffrey P. Donnelly, D. Reide Corbett

Pythons in Burma: Short-tailed python (Reptilia: Squamata) Pythons in Burma: Short-tailed python (Reptilia: Squamata)

Short-tailed pythons, Python curtus species group, occur predominantly in the Malayan Peninsula, Sumatra, and Borneo. The discovery of an adult female in Mon State, Myanmar, led to a review of the distribution of all group members (spot-mapping of all localities of confirmed occurrence) and an examination of morphological variation in P. brongersmai. The resulting maps demonstrate a...
Authors
George R. Zug, Steve W. Gotte, Jeremy F. Jacobs

Predator removal enhances waterbird restoration in Chesapeake Bay (Maryland) Predator removal enhances waterbird restoration in Chesapeake Bay (Maryland)

This report represents an update to an earlier report(Erwin et al. 2007a) on wildlife restoration on the largest dredge material island project in the United States underway in Talbot County, Maryland (Figure 1) in the mid–Chesapeake Bay region, referred to as the Paul Sarbanes Ecosystem Restoration Project at Poplar Island (www.nab.usace.army.mil/projects/Maryland/PoplarIsland/documents...
Authors
R. Michael Erwin, Peter C. McGowan, Jan Reese
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