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Templates for Releasing and Archiving Individual-based Genotype Data

September 5, 2025

This data release contains standardized templates for individual-based genotype data. We provide two template packages: one for Short Tandem Repeat or Microsatellite (STR) genotype datasets [str_release.zip] and another for Single Nucleotide Polymorphism (SNP)/variant call genotype datasets [snp_release.zip]. The templates were developed to comply with standards for scientific data publication at the U.S. Geological Survey (USGS) and used for USGS trusted digital repositories, such as ScienceBase, Forest Service Science Data Archive, and other publicly accessible general data repositories such as Dryad, FigShare, and Zenodo. The xml metadata templates [str_metadata_template.xml; snp_metadata_template.xml] can be filled out and edited in the USGS Metadata Wizard.

Publication Year 2025
Title Templates for Releasing and Archiving Individual-based Genotype Data
DOI 10.5066/P13WB3VK
Authors Amy Vandergast, Rachel Toczydlowski, Antoinette J Piaggio, Margaret (Maggie) E. Hunter
Product Type Data Release
Record Source USGS Asset Identifier Service (AIS)
USGS Organization Western Ecological Research Center - Headquarters
Rights This work is marked with CC0 1.0 Universal
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