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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5123

Deposited sediment influences occurrence of functional traits of stream fishes Deposited sediment influences occurrence of functional traits of stream fishes

To better understand stream-fish sensitivity to fine sediment, we documented assemblage-wide responses by selected traits along a sedimentation gradient. We then discuss the management implications of these ‘dose–response’ relations in the contexts of biotic assessments and conservation of sediment-sensitive species. We identified a spatial gradient in sediment deposition among streams...
Authors
Mallory Hirschler, Amy M. Villamagna, Paul L. Angermeier, Eric Laflamme

Diurnal habitat selection and survival of elk neonates Diurnal habitat selection and survival of elk neonates

Natural selection should favor development of behaviors that increase survival, including juvenile survival. Habitat characteristics (e.g., hiding cover, forage quality and availability), maternal habitat selection, and microhabitat selection by the calf may influence elk (Cervus canadensis) calf survival and recruitment. We assessed diurnal microhabitat selection of bed sites by elk...
Authors
James W. Pitman, James W. Cain, William R. Gould, Nicole M. Tatman, Stewart G. Liley

Shellfish aquaculture farms as foraging habitat for nearshore fishes and crabs Shellfish aquaculture farms as foraging habitat for nearshore fishes and crabs

Objective Oyster reefs across North America have declined precipitously over the past 140 years. In Washington State, Olympia oyster Ostrea lurida reefs historically provided water filtration and nearshore structural habitat for fishes and invertebrates, but this species is now functionally extinct across its historical range. In place of these naturally occurring reefs, shellfish farms...
Authors
Karl Veggerby, Mark David Scheuerell, Beth Sanderson, Peter Kiffney, Bridget Ferriss

Evaluating the context dependency of large river nursery habitats for fishes in the lower Red River catchment Evaluating the context dependency of large river nursery habitats for fishes in the lower Red River catchment

Both fine- and coarse-scale physicochemical conditions affect the quantity and quality of nursery habitats within riverine ecosystems. Nursery habitats in large, braided, and sandbed streams such as the lower Red River of Oklahoma, Texas, and Arkansas are not well described and likely vary among species. Identification of nursery habitats is important for developing proper conservation...
Authors
Paul Q. Ramsey, John Dattilo, Dennis DeVries, Shannon K. Brewer

Nonbreeding waterfowl behavioral response to crewed and uncrewed aerial surveys on conservation areas in Missouri Nonbreeding waterfowl behavioral response to crewed and uncrewed aerial surveys on conservation areas in Missouri

Monitoring waterfowl populations provides the basis for improving habitat quantity and quality, establishing harvest regulations, and ensuring sustainable waterfowl populations through appropriate management. Waterfowl biologists currently use a variety of population and habitat monitoring methods ranging from informal ground observations to low-level occupied aircraft surveys. Although...
Authors
Reid A. Viegut, Elisabeth B. Webb, Andrew H. Raedeke, Zhicheng Tang, Yang Zhang, Yi Shang

Comparison of two otolith processing methods for silver carp age estimation Comparison of two otolith processing methods for silver carp age estimation

Accurate age estimates are critical in the development, implementation, and assessment of silver carp (Hypophthalmichthys molitrix) management plans. Lapilli otoliths are the most commonly used calcified structures for silver carp age estimation, but studies on the precision of two established preparation methods [i.e., grind-and-burn (GB), thin-section (TS)] are lacking. Therefore, we...
Authors
Jeff N. Stevens, Cooper E. Barshinger, Jonathan J. Spurgeon, Michael A. Eggleton, Steve E. Lochmann

Second guessing the maximum likelihood estimator values for bat surveys Second guessing the maximum likelihood estimator values for bat surveys

TThe U.S. Fish and Wildlife Service allows acoustical surveys and automated identification software to determine the presence of the endangered northern long-eared bat (Myotis septentrionalis) and Indiana bat (Myotis sodalis). Analytical software is required to assess presence probability on a site-night basis using a maximum likelihood estimator (MLE) that accounts for interspecific bat
Authors
W. Mark Ford, Jesse L. De La Cruz, Emily D. Thorne, Alexander Silvis, Michael P. Armstrong, R. Andrew King

Southern fox squirrel and eastern gray squirrel interactions in a fire-maintained ecosystem Southern fox squirrel and eastern gray squirrel interactions in a fire-maintained ecosystem

Southern fox squirrels (Sciurus niger niger) have been declining due to habitat fragmentation, cover type conversion, and fire suppression in the Southeast. A decrease in growing season burns has led to hardwood encroachment and forest mesophication that benefit the competing eastern gray squirrels (S. carolinensis). In the southern Coastal Plain and Piedmont of Virginia, these pattern...
Authors
M.H. Guill, J.L. De La Cruz, M. Puckett, S.D. Klopfer, B. Martin, W. Mark Ford

Second guessing the maximum likelihood estimator values for bat surveys. Second guessing the maximum likelihood estimator values for bat surveys.

The U.S. Fish and Wildlife Service allows acoustical surveys and automated identification software to determine the presence of the endangered northern long-eared bat (Myotis septentrionalis) and Indiana bat (Myotis sodalis). Analytical software is required to assess presence probability on a site-night basis using a maximum likelihood estimator (MLE) that accounts for interspecific bat
Authors
W. Mark Ford, Jesse L. De La Cruz, Emily D. Thorne, Alexander Silvis, Michael P. Armstrong, R. Andrew King

Seasonal activity patterns of northern long-eared bats at hibernacula in western Virginia Seasonal activity patterns of northern long-eared bats at hibernacula in western Virginia

Understanding the relationships of biotic and abiotic factors to seasonal activity at hibernacula is important for the conservation of bats impacted by white-nose syndrome (WNS). Research on the relative and probable activity patterns of the federally endangered northern long-eared bat (Myotis septentrionalis) primarily has focused on summer maternity colonies, whereas surveys at...
Authors
Jesse L. De La Cruz, Richard J. Reynolds, Wil Orndorff, Thomas Malabad, Katarina Kosic Ficco, Karen E. Powers, W. Mark Ford

Seasonal activity patterns of northern long-eared bats on the coastal Mid-Atlantic Seasonal activity patterns of northern long-eared bats on the coastal Mid-Atlantic

Conservation of bats declining from white-nose syndrome (WNS) impacts requires an understanding of both temporal and landscape-level habitat relationships. Traditionally, much of the research on bat ecology has focused on behavior of summer maternity colonies within species’ distribution cores, including that of the endangered northern long-eared bat (Myotis septentrionalis). To further...
Authors
Jesse L. De La Cruz, Nicholas J. Kalen, Elaine L. Barr, Emily D. Thorne, Alexander Silvis, Richard J. Reynolds, W. Mark Ford

occupancyTuts: Occupancy modelling tutorials with RPresence occupancyTuts: Occupancy modelling tutorials with RPresence

1. The occupancy modelling framework offers tremendous flexibility in estimating species abundance and distribution patterns while accounting for imperfect detection, and has seen rapid growth and adoption since its introduction at the beginning of the century. 2. At the same time, in an era of big data, there are increasing demands on developing quantitative skills and proficiency in...
Authors
Therese M. Donovan, James E. Hines, Darryl MacKenzie
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