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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5350

Carryover effects across juvenile periods vary by species, cause-specific mortality, and stage-specific behavior Carryover effects across juvenile periods vary by species, cause-specific mortality, and stage-specific behavior

Conditions during one life-stage can carry over to influence fitness outcomes in later stages. How carryover effects manifest, however, may vary depending on the type and magnitude of risks that animals face in subsequent life-stages. The influence of carryover effects on cause-specific mortality remains largely unclear, particularly during vulnerable life-stages, including juvenile...
Authors
Emily R. Shertzer, Donald W. Jones, Anna D. Chalfoun

Novel avian papillomaviruses identified in a south polar skua sampled on Ross Island, Antarctica Novel avian papillomaviruses identified in a south polar skua sampled on Ross Island, Antarctica

Papillomaviruses are small circular DNA viruses that infect epithelial cells of their hosts. Avian papillomaviruses are poorly sampled/documented compared to those infecting humans. We used a viral metagenomic approach to identify viruses from the oral swab taken from a deceased south polar skua (Stercorarius maccormicki) found at Cape Royds, Ross Island, Antarctica in late 2024. We...
Authors
Riley Biter, Melanie Regney, Annie E. Schmidt, Nadia Swanson, Megan Elrod, Amélie Lescroël, Christina Burnham, Dennis Jongsomjit, Suzanne Winquist, Jean Pennycook, David G. Ainley, Katie M. Dugger, Grant Ballard, Simona Kraberger, Arvind Varsani

Rain interacts with directional wind to cause nest failures within breeding colonies of Western and Clark's Grebes Rain interacts with directional wind to cause nest failures within breeding colonies of Western and Clark's Grebes

Western Grebe (Aechmophorus occidentalis) and Clark's Grebe (Aechmophorus clarkii) populations have declined across their range, and they are species of high conservation concern. Cascade Reservoir in central Idaho supports one of the largest breeding colonies of Aechmophorus grebes in North America (and the largest in Idaho), but few offspring are produced from the colony in most years...
Authors
Anne Yen, Courtney J. Conway, Kerri T. Vierling

Long lives, short futures: Freshwater turtle and tortoise imports to the United States highlight global trade and conservation challenges Long lives, short futures: Freshwater turtle and tortoise imports to the United States highlight global trade and conservation challenges

Global trade of freshwater turtles and tortoises presents substantial conservation, biosecurity, and regulatory challenges, particularly for long-lived species that are already highly imperiled. While the United States has historically played a key role in supplying the international chelonian trade, investigations into its role as an importer remain limited. We used import data from the...
Authors
Max D Jones, Ryan J Almeida, Rachel Boratto, Brooke L Talley, Scott W Buchanan, Jennifer Sevin, Nancy E Karraker, Elizabeth Ann Hunter

Survey protocols drive heterogeneity in occupancy estimates that cannot be standardized using post hoc analyses Survey protocols drive heterogeneity in occupancy estimates that cannot be standardized using post hoc analyses

Site occupancy models are widely used to estimate species distributions from presence–nondetection data, yet for mobile animals, the true proportion of sites occupied varies in time. Thus, true occupancy and estimates generated from different protocols are affected by temporal characteristics of survey design.Here we tested whether we could standardize occupancy estimates across...
Authors
Lucas K. Parvin, Vitek Jirinec, Matthias Leu, Jonathon Joseph Valente

Higher methanotroph abundance and bottom-water methane in ponds with floating photovoltaic arrays Higher methanotroph abundance and bottom-water methane in ponds with floating photovoltaic arrays

Floating photovoltaic (FPV) arrays alter the methane (CH4) cycling dynamics of waterbodies on which they are deployed. Here, we investigated dissolved CH4 dynamics and associated CH4 cycling microbial communities (methanogens and methanotrophs) in the second year of FPV deployment (70% aerial coverage) in experimental ponds. We found that bottom-water CH4 concentrations were twice as...
Authors
Nicholas E. Ray, Sophia Aredas, Steven Mark Grodsky, Ash Canino, Simone J. Cardoso, Meredith A. Holgerson, Meredith E. Theus, Marian L. Schmidt

Potential for bird-based biotic indices in watershed assessments: A review of methods, applications, and suggestions for improvement Potential for bird-based biotic indices in watershed assessments: A review of methods, applications, and suggestions for improvement

Birds are sensitive to changes in environmental conditions, and metrics such as species diversity, abundance, and guild composition that describe community-level responses to anthropogenic disturbance can be useful indicators of ecosystem condition. We reviewed published studies (56) of bird-based biotic indices developed for diverse ecosystems in 14 countries to evaluate their efficacy...
Authors
Edwin Njuguna, Christina Amy Murphy, Cynthia Loftin, Malcolm Hunter, David Courtemanch, Peter Njoroge

From uncertainty to co-production: Structural and systemic barriers to salmon recovery in Puget Sound From uncertainty to co-production: Structural and systemic barriers to salmon recovery in Puget Sound

This case study examines barriers to implementing “H-Integrated” salmon recovery strategies—efforts that coordinate habitat, hatchery, harvest, and hydropower actions—in Puget Sound. Based on a focus group with Tribal, State, Federal, and nonprofit practitioners, we identified five interconnected constraints: data gaps, modeling frameworks, decision-making under uncertainty, limited...
Authors
Rebecca Q. Wheaton, Bryan M. Reiley, Isa Woo, Melanie J. Davis

Variation in diet and lipid content of age-0 sturgeon (Scaphirhynchus sp.) in the lower Missouri River basin Variation in diet and lipid content of age-0 sturgeon (Scaphirhynchus sp.) in the lower Missouri River basin

Shovelnose sturgeon (Scaphirhynchus platorynchus) and related endangered pallid sturgeon (S. albus) are species of interest in the highly modified Missouri River. Scaphirhynchus sturgeon require long distances of riverine habitat for the development of drifting free embryos along with suitable foraging habitat during the subsequent transition to exogenous feeding. Working with specimens...
Authors
Alin González, James M. Long, Nathan J.C. Gosch, Anthony P. Civiello, Todd R. Gemeinhardt, Jerrod Hall

Composite samples for perfluorooctanesulfonate in fish may change contaminant threshold decisions Composite samples for perfluorooctanesulfonate in fish may change contaminant threshold decisions

The widespread occurrence and persistence of the per- and polyfluoroalkyl substances (PFAS) in the environment may pose significant health risks to humans. Fish consumption is a direct pathway for exposure, prompting extensive monitoring. In the United States and Europe, fish consumption advisories for PFAS generally focus on perfluorooctanesulfonate (PFOS), the most frequent and...
Authors
Guillermo Figueroa-Muñoz, Christina Amy Murphy, Joseph D. Zydlewski

Political identity predicts hunting occurrence on private land Political identity predicts hunting occurrence on private land

Understanding the factors that predict whether hunting occurs on private land is vital for effective wildlife management. In this exploratory study, we surveyed non-industrial landowners (n = 855) along an urban-to-rural gradient in Durham County, North Carolina, to examine how political identity and several socio-demographic and geographic variables predict hunting occurrence on private...
Authors
Hannah M. Desrochers, M. Nils Peterson, Lincoln R. Larson, Christopher E. Moorman, Jack H. Deppman, Elizabeth M. Kierepka, John C. Kilgo, Cristina E. Watkins, Nathan J. Hostetter

Riverscape heterogeneity shapes population diversity for a migratory fish Riverscape heterogeneity shapes population diversity for a migratory fish

Habitat patch dynamics can scale up to influence population demography and diversity with implications for resilience to environmental stochasticity. But how the spatial arrangement and size of habitat patches interact with other components of habitat heterogeneity to shape population diversity at larger spatial scales is not well understood. For riverine fishes, there is increasing...
Authors
Jeffrey R Baldock, William C. Rosenthal, Robert Al-Chokhachy, Matthew R. Campbell, Catherine E. Wagner, Annika W. Walters
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