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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5350

Soil and geomorphic patterns within relict charcoal hearths could represent unique ecosystem niches Soil and geomorphic patterns within relict charcoal hearths could represent unique ecosystem niches

Hearths used for 19th and 20th century charcoal manufacturing have been found to have unique plant communities or to produce unique growth characteristics for some species but not others. Given known differences in hearth morphology, within hearth physical and chemical differences may exist and result in unique ecologic niches. We examined soil stratigraphy across 8 relict charcoal...
Authors
S. Bayuzick, D. Guarin, J. Benavides, A. Bonhage, F. Hirsch, Duane R. Diefenbach, M. McDill, T. Raab, P.J. Drohan

Assimilating ecological theory with empiricism: Using constrained generalized additive models to enhance survival analyses Assimilating ecological theory with empiricism: Using constrained generalized additive models to enhance survival analyses

1. Integrating ecological theory with empirical methods is ubiquitous in ecology using hierarchical Bayesian models. However, there has been little development focused on integration of ecological theory into models for survival analysis. Survival is a fundamental process, linking individual fitness with population dynamics, but incorporating life history strategies to inform survival...
Authors
Alison Ketz, Daniel J. Storm, Rachel Barker, Anthony D. Apa, Cristian Oliva-Aviles, Daniel P. Walsh

The first documented interaction between a long-tailed weasel (Mustela frenata) and a plains spotted skunk (Spilogale interrupta) carcass The first documented interaction between a long-tailed weasel (Mustela frenata) and a plains spotted skunk (Spilogale interrupta) carcass

A novel interaction between a long-tailed weasel (Mustela frenata) and a plains spotted skunk (Spilogale interrupta) carcass is detailed. In November 2020, a farmer in Edmunds County in north-central South Dakota sent in a video recording of a long-tailed weasel with a spotted skunk carcass. Location of the event, carcass condition, and recorded behavior of the long-tailed weasel offer...
Authors
K.M. White, Joshua D. Stafford, Robert Charles Lonsinger

Viability of side-scan sonar to enumerate Paddlefish, a large pelagic freshwater fish, in rivers and reservoirs Viability of side-scan sonar to enumerate Paddlefish, a large pelagic freshwater fish, in rivers and reservoirs

Recreational-grade side-scan sonar (SSS) has become an invaluable tool for inland fisheries, particularly when characterizing underwater habitat, but it is being increasingly used for enumerating large-bodied (> 1 m total length [TL]) aquatic fauna. We used SSS in river and reservoir environments to evaluate methods for identifying and counting Paddlefish Polyodon spathula, a large...
Authors
Wyatt Wolfenkoehler, James M. Long, Ryan Gary, Richard A. Snow, Jason D. Schooley, Lindsey Ann Bruckerhoff, Robert Charles Lonsinger

Diet composition and resource overlap of sympatric native and introduced salmonids across neighboring streams during a peak discharge event Diet composition and resource overlap of sympatric native and introduced salmonids across neighboring streams during a peak discharge event

Species assemblages composed of non-native and native fishes are found in freshwater systems throughout the world, and interactions such as interspecific competition that may negatively affect native species are expected when non-native species are present. In the Smith River watershed, Montana, rainbow trout were introduced by 1930. Native mountain whitefish and non-native rainbow trout...
Authors
Tanner L. Cox, Michael J. Lance, Lindsey K. Albertson, Michelle A. Briggs, Adeline J. Dutton, Alexander V. Zale

First nests of Endangered Nordmann’s Greenshank Tringa guttifer found in over 40 years indicate nesting plasticity First nests of Endangered Nordmann’s Greenshank Tringa guttifer found in over 40 years indicate nesting plasticity

Knowledge of the breeding ecology of Endangered Nordmann’s Greenshank Tringa guttifer is necessary to develop a comprehensive species-specific conservation plan. We found nine greenshank nests in Schaste Bay, Russian Far East during the summers of 2019–2021. These are the first nests found in over 40 years and the only discovered to date on mainland Russia. In contrast to previous nest
Authors
Konstantin S. Maslovsky, Philipp N. Maleko, Vladimir V. Pronkevich, Jonathan C. Slaght, Abby Powell

Using the gut microbiome to assess stocking efforts of the endangered Pallid Sturgeon, Scaphirhynchus albus Using the gut microbiome to assess stocking efforts of the endangered Pallid Sturgeon, Scaphirhynchus albus

The endangered Pallid Sturgeon, Scaphirhynchus albus, has been actively managed to prevent population declines, including stocking of hatchery-raised fish. The gut microbiome plays an innate role in an organism’s absorption of nutrients by increasing nutrient availability and can provide new insights for Pallid Sturgeon management. In this study, the Pallid Sturgeon’s microbiome is...
Authors
Sarah Gaughan, John A. Kyndt, Justin D. Haas, Kirk D. Steffensen, Patrick M. Kocovsky, Kevin L. Pope

A perched culvert and natural obstructions limit fish dispersal in an intermittent prairie stream A perched culvert and natural obstructions limit fish dispersal in an intermittent prairie stream

Poorly constructed road crossings block upstream movement of fish into stream reaches that provide critical habitat or connect isolated populations. Although removing these barriers is often a conservation priority, quantifying fish passage following removal has not been well studied, particularly in intermittent streams. In this study, we sought to understand how barriers influence the...
Authors
Keith B. Gido, Skyler C. Hedden, Lindsey Ann Bruckerhoff, Casey A. Pennock, Crosby K. Hedden, Garrett W. Hopper, Elizabeth A. Renner, Eric R. Johnson, Ben J. Postlethwait

Genetic diversity and connectivity of moose (Alces americanus americanus) in eastern North America Genetic diversity and connectivity of moose (Alces americanus americanus) in eastern North America

Genetic diversity is critical to a population’s ability to overcome gradual environment change. Large-bodied wildlife existing in regions with relatively high human population density are vulnerable to isolation-induced genetic drift, population bottlenecks, and loss of genetic diversity. Moose (Alces americanus americanus) in eastern North America have a complex history of drastic...
Authors
Elias Rosenblatt, Katherina Gieder, Therese M. Donovan, James Murdoch, Timothy P.L. Smith, Stephanie McKay, Michael P. Heaton, Theodore S. Kalbfleisch, Brenda M. Murdoch, Suraj Bhattarai, Emory Pacht, Emma Verbist, Veronica Basnayake, Stephanie McKay

Juvenile life history diversity is associated with lifetime individual heterogeneity in a migratory fish Juvenile life history diversity is associated with lifetime individual heterogeneity in a migratory fish

Differences in the life history pathways (LHPs) of juvenile animals are often associated with differences in demographic rates in later life stages. For migratory animals, different LHPs often result in animals from the same population occupying distinct habitats subjected to different environmental drivers. Understanding how demographic rates differ among animals expressing different...
Authors
Mark H. Sorel, Andrew R. Murdoch, Richard W. Zabel, Jeffrey C. Jorgensen, Cory M. Kamphaus, Sarah J. Converse

Approaching the upper boundary of driver-response relationships: Identifying factors using a novel framework integrating quantile regression with interpretable machine learning Approaching the upper boundary of driver-response relationships: Identifying factors using a novel framework integrating quantile regression with interpretable machine learning

The identification of factors that may be forcing ecological observations to approach the upper boundary provides insight into potential mechanisms affecting driver-response relationships, and can help inform ecosystem management, but has rarely been explored. In this study, we propose a novel framework integrating quantile regression with interpretable machine learning. In the first...
Authors
Zhongyao Liang, Yaoyang Xu, Gang Zhao, Wentao Lu, Zhenghui Fu, Shuhang Wang, Tyler Wagner

Density effects on native and non-native trout survival in streams Density effects on native and non-native trout survival in streams

Environmental stressors associated with a changing climate and non-native fish, individually, represent significant threats to native fish conservation. These threats can exacerbate risks to native fishes when conditions interact at the trailing edge of a population's distribution. We collected capture–mark–recapture data for Rio Grande cutthroat trout (RGCT, Oncorhynchus clarkii...
Authors
Brock M. Huntsman, Lauren Flynn, Colleen A. Caldwell, Abigail J. Lynch, Fitsum Abadi
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